RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 IQCJQ1A5X6 159 aa13.69□□□□□ -0.22
NUP43-205ENST00000463048 KIAA1644Q3SXP7 199 aa13.69□□□□□ -0.22
NUP43-205ENST00000463048 MPV17L2Q567V2 206 aa13.69□□□□□ -0.22
NUP43-205ENST00000463048 ORMDL3Q8N138 153 aa13.69□□□□□ -0.22
NUP43-205ENST00000463048 DNAH2Q9P225 4427 aa13.69□□□□□ -0.22
NUP43-205ENST00000463048 TSHBP01222 138 aa13.68□□□□□ -0.22
NUP43-205ENST00000463048 APCSP02743 223 aa13.68□□□□□ -0.22
NUP43-205ENST00000463048 POLR2KP53803 58 aaKnown RBP13.68□□□□□ -0.22
NUP43-205ENST00000463048 Q8N976 141 aa13.68□□□□□ -0.22
NUP43-205ENST00000463048 KLK12Q9UKR0 248 aa13.68□□□□□ -0.22
NUP43-205ENST00000463048 DNAH10Q8IVF4 4471 aa13.67□□□□□ -0.22
NUP43-205ENST00000463048 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.67□□□□□ -0.22
NUP43-205ENST00000463048 IGKV2-29A2NJV5 120 aaPredicted RBP13.67□□□□□ -0.22
NUP43-205ENST00000463048 UBE2L6O14933 153 aa13.67□□□□□ -0.22
NUP43-205ENST00000463048 PPBPP02775 128 aa13.67□□□□□ -0.22
NUP43-205ENST00000463048 ELOBQ15370 118 aa13.67□□□□□ -0.22
NUP43-205ENST00000463048 C10orf126Q8N4M7 172 aa13.67□□□□□ -0.22
NUP43-205ENST00000463048 LOC389332A0A1B0GUA5 103 aa13.66□□□□□ -0.22
NUP43-205ENST00000463048 VCYO14598 125 aa13.66□□□□□ -0.22
NUP43-205ENST00000463048 FCER1GP30273 86 aa13.66□□□□□ -0.22
NUP43-205ENST00000463048 CBLN2Q8IUK8 224 aa13.66□□□□□ -0.22
NUP43-205ENST00000463048 IBA57-AS1B1ANH7 110 aa13.65□□□□□ -0.22
NUP43-205ENST00000463048 TRBV24-1A0A075B6N3 115 aa13.64□□□□□ -0.23
NUP43-205ENST00000463048 TRBV27A0A0K0K1C4 114 aa13.64□□□□□ -0.23
NUP43-205ENST00000463048 HLA-DQA1P01909 254 aa13.64□□□□□ -0.23
NUP43-205ENST00000463048 ANGP03950 147 aaKnown RBP13.64□□□□□ -0.23
NUP43-205ENST00000463048 RBX1P62877 108 aa13.64□□□□□ -0.23
NUP43-205ENST00000463048 CLPSL2Q6UWE3 100 aa13.64□□□□□ -0.23
NUP43-205ENST00000463048 C20orf78Q9BR46 151 aa13.64□□□□□ -0.23
NUP43-205ENST00000463048 GNB1LQ9BYB4 327 aa13.64□□□□□ -0.23
NUP43-205ENST00000463048 PRSS29PA6NIE9 313 aa13.63□□□□□ -0.23
NUP43-205ENST00000463048 UBE2WQ96B02 151 aa13.63□□□□□ -0.23
NUP43-205ENST00000463048 KIR2DL4Q99706 377 aa13.63□□□□□ -0.23
NUP43-205ENST00000463048 CHCHD7Q9BUK0 85 aa13.63□□□□□ -0.23
NUP43-205ENST00000463048 SMIM2Q9BVW6 85 aa13.63□□□□□ -0.23
NUP43-205ENST00000463048 MRPL18Q9H0U6 180 aaKnown RBP13.63□□□□□ -0.23
NUP43-205ENST00000463048 K7EP13 123 aa13.62□□□□□ -0.23
NUP43-205ENST00000463048 PKIAP61925 76 aa13.62□□□□□ -0.23
NUP43-205ENST00000463048 FRAS1Q86XX4 4008 aa13.61□□□□□ -0.23
NUP43-205ENST00000463048 PHOX2AO14813 284 aa13.61□□□□□ -0.23
NUP43-205ENST00000463048 TCAPO15273 167 aa13.61□□□□□ -0.23
NUP43-205ENST00000463048 FABP9Q0Z7S8 132 aa13.61□□□□□ -0.23
NUP43-205ENST00000463048 AMMECR1LQ6DCA0 310 aa13.61□□□□□ -0.23
NUP43-205ENST00000463048 RNASEKQ6P5S7 137 aaKnown RBP13.61□□□□□ -0.23
NUP43-205ENST00000463048 MAP1LC3AQ9H492 121 aa13.61□□□□□ -0.23
NUP43-205ENST00000463048 SMCO4Q9NRQ5 59 aa13.61□□□□□ -0.23
NUP43-205ENST00000463048 IGLV4-60A0A075B6I1 120 aa13.6□□□□□ -0.23
NUP43-205ENST00000463048 TNP2Q05952 138 aa13.6□□□□□ -0.23
NUP43-205ENST00000463048 COX19Q49B96 90 aa13.6□□□□□ -0.23
NUP43-205ENST00000463048 NFE4Q86UQ8 179 aa13.59□□□□□ -0.23
NUP43-205ENST00000463048 LINC00269Q8N2A0 174 aa13.59□□□□□ -0.23
NUP43-205ENST00000463048 TRAPPC1Q9Y5R8 145 aa13.59□□□□□ -0.23
NUP43-205ENST00000463048 CRPP02741 224 aa13.58□□□□□ -0.24
NUP43-205ENST00000463048 MT-ND6P03923 174 aa13.58□□□□□ -0.24
NUP43-205ENST00000463048 FGF6P10767 208 aa13.58□□□□□ -0.24
NUP43-205ENST00000463048 ESDP10768 282 aa13.58□□□□□ -0.24
NUP43-205ENST00000463048 RPL32P62910 135 aaKnown RBP13.58□□□□□ -0.24
NUP43-205ENST00000463048 Q6ZRN7 208 aaPredicted RBP13.58□□□□□ -0.24
NUP43-205ENST00000463048 LINC00336Q6ZUF6 198 aa13.58□□□□□ -0.24
NUP43-205ENST00000463048 YPEL4Q96NS1 127 aa13.58□□□□□ -0.24
NUP43-205ENST00000463048 LAMTOR2Q9Y2Q5 125 aa13.58□□□□□ -0.24
NUP43-205ENST00000463048 DNAH17Q9UFH2 4485 aa13.57□□□□□ -0.24
NUP43-205ENST00000463048 IGKV3OR2-268A0A0C4DH90 116 aa13.57□□□□□ -0.24
NUP43-205ENST00000463048 PSCAO43653 123 aa13.57□□□□□ -0.24
NUP43-205ENST00000463048 LAGE3Q14657 143 aa13.57□□□□□ -0.24
NUP43-205ENST00000463048 C20orf203Q8NBC4 194 aa13.57□□□□□ -0.24
NUP43-205ENST00000463048 IGKV2D-24A0A075B6R9 120 aa13.56□□□□□ -0.24
NUP43-205ENST00000463048 TRAV8-3A0A0A6YYJ7 113 aa13.56□□□□□ -0.24
NUP43-205ENST00000463048 SCO1O75880 301 aa13.56□□□□□ -0.24
NUP43-205ENST00000463048 ENHOQ6UWT2 76 aa13.56□□□□□ -0.24
NUP43-205ENST00000463048 BTF3P20290 206 aaKnown RBP13.55□□□□□ -0.24
NUP43-205ENST00000463048 RAB5AP20339 215 aa13.55□□□□□ -0.24
NUP43-205ENST00000463048 ALKBH7Q9BT30 221 aaPredicted RBP13.55□□□□□ -0.24
NUP43-205ENST00000463048 A0A1B0GUV1 79 aa13.54□□□□□ -0.24
NUP43-205ENST00000463048 IFI27P40305 119 aaPredicted RBP13.54□□□□□ -0.24
NUP43-205ENST00000463048 Q8N8P6 123 aa13.54□□□□□ -0.24
NUP43-205ENST00000463048 IGLV10-54A0A075B6I4 117 aa13.53□□□□□ -0.24
NUP43-205ENST00000463048 H7C423 109 aa13.53□□□□□ -0.24
NUP43-205ENST00000463048 RPL39P62891 51 aaKnown RBP13.53□□□□□ -0.24
NUP43-205ENST00000463048 REG3AQ06141 175 aa13.53□□□□□ -0.24
NUP43-205ENST00000463048 TMEM101Q96IK0 257 aa13.53□□□□□ -0.24
NUP43-205ENST00000463048 PRSS47A8MTI9 375 aa13.52□□□□□ -0.25
NUP43-205ENST00000463048 Q0VG73 95 aa13.52□□□□□ -0.25
NUP43-205ENST00000463048 OR5A1Q8NGJ0 315 aa13.52□□□□□ -0.25
NUP43-205ENST00000463048 FAT2Q9NYQ8 4349 aa13.52□□□□□ -0.25
NUP43-205ENST00000463048 DGAT2L7PQ6IED9 249 aa13.51□□□□□ -0.25
NUP43-205ENST00000463048 PRSS3P2Q8NHM4 247 aa13.51□□□□□ -0.25
NUP43-205ENST00000463048 RMI2Q96E14 147 aa13.51□□□□□ -0.25
NUP43-205ENST00000463048 C1orf43Q9BWL3 253 aa13.51□□□□□ -0.25
NUP43-205ENST00000463048 TM2D2Q9BX73 214 aa13.51□□□□□ -0.25
NUP43-205ENST00000463048 RNASE13Q5GAN3 156 aaKnown RBP13.5□□□□□ -0.25
NUP43-205ENST00000463048 LECT2O14960 151 aa13.49□□□□□ -0.25
NUP43-205ENST00000463048 ZNF25P17030 456 aaPredicted RBP13.49□□□□□ -0.25
NUP43-205ENST00000463048 TMEM18Q96B42 140 aa13.49□□□□□ -0.25
NUP43-205ENST00000463048 NXT2Q9NPJ8 142 aaKnown RBP13.49□□□□□ -0.25
NUP43-205ENST00000463048 PRR34Q9NV39 138 aa13.49□□□□□ -0.25
NUP43-205ENST00000463048 UBE2D4Q9Y2X8 147 aa13.49□□□□□ -0.25
NUP43-205ENST00000463048 MIAQ16674 131 aa13.48□□□□□ -0.25
NUP43-205ENST00000463048 MRPL52Q86TS9 123 aaKnown RBP13.48□□□□□ -0.25
NUP43-205ENST00000463048 A0A1B0GVY2 172 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms