RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 PKD1P98161 4303 aa8.64□□□□□ -1.03
COL18A1-206ENST00000459895 DNAH11Q96DT5 4516 aa8.63□□□□□ -1.03
COL18A1-206ENST00000459895 TRAV9-2A0A087WT02 112 aa8.63□□□□□ -1.03
COL18A1-206ENST00000459895 K7EP13 123 aa8.63□□□□□ -1.03
COL18A1-206ENST00000459895 CKS2P33552 79 aa8.63□□□□□ -1.03
COL18A1-206ENST00000459895 SUMO2P61956 95 aaKnown RBP8.63□□□□□ -1.03
COL18A1-206ENST00000459895 LAGE3Q14657 143 aa8.63□□□□□ -1.03
COL18A1-206ENST00000459895 ATRAIDQ6UW56 229 aa8.63□□□□□ -1.03
COL18A1-206ENST00000459895 CHCHD7Q9BUK0 85 aa8.63□□□□□ -1.03
COL18A1-206ENST00000459895 Q9HAA7 133 aa8.63□□□□□ -1.03
COL18A1-206ENST00000459895 A0A087WX48 190 aa8.62□□□□□ -1.03
COL18A1-206ENST00000459895 TRBV27A0A0K0K1C4 114 aa8.62□□□□□ -1.03
COL18A1-206ENST00000459895 PRSS29PA6NIE9 313 aa8.62□□□□□ -1.03
COL18A1-206ENST00000459895 IBA57-AS1B1ANH7 110 aa8.62□□□□□ -1.03
COL18A1-206ENST00000459895 I3L3M4 83 aa8.62□□□□□ -1.03
COL18A1-206ENST00000459895 TNFRSF6BO95407 300 aa8.62□□□□□ -1.03
COL18A1-206ENST00000459895 POLR2KP53803 58 aaKnown RBP8.62□□□□□ -1.03
COL18A1-206ENST00000459895 LINC00336Q6ZUF6 198 aa8.62□□□□□ -1.03
COL18A1-206ENST00000459895 ORMDL3Q8N138 153 aa8.62□□□□□ -1.03
COL18A1-206ENST00000459895 Q8N976 141 aa8.62□□□□□ -1.03
COL18A1-206ENST00000459895 PKHD1P08F94 4074 aa8.62□□□□□ -1.03
COL18A1-206ENST00000459895 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.61□□□□□ -1.03
COL18A1-206ENST00000459895 IGKV2-29A2NJV5 120 aaPredicted RBP8.61□□□□□ -1.03
COL18A1-206ENST00000459895 BTF3P20290 206 aaKnown RBP8.61□□□□□ -1.03
COL18A1-206ENST00000459895 RBX1P62877 108 aa8.61□□□□□ -1.03
COL18A1-206ENST00000459895 TNP2Q05952 138 aa8.61□□□□□ -1.03
COL18A1-206ENST00000459895 PRELID3AQ96N28 172 aa8.61□□□□□ -1.03
COL18A1-206ENST00000459895 SMIM2Q9BVW6 85 aa8.61□□□□□ -1.03
COL18A1-206ENST00000459895 KLK12Q9UKR0 248 aa8.61□□□□□ -1.03
COL18A1-206ENST00000459895 TRBV24-1A0A075B6N3 115 aa8.6□□□□□ -1.03
COL18A1-206ENST00000459895 TGIF2-C20orf24A0A0A6YYL0 155 aa8.6□□□□□ -1.03
COL18A1-206ENST00000459895 A0A1B0GVY2 172 aa8.6□□□□□ -1.03
COL18A1-206ENST00000459895 TMEM262E9PQX1 116 aa8.6□□□□□ -1.03
COL18A1-206ENST00000459895 PPP1R17O96001 155 aa8.6□□□□□ -1.03
COL18A1-206ENST00000459895 PPBPP02775 128 aa8.6□□□□□ -1.03
COL18A1-206ENST00000459895 PMCHP20382 165 aa8.6□□□□□ -1.03
COL18A1-206ENST00000459895 PKIAP61925 76 aa8.6□□□□□ -1.03
COL18A1-206ENST00000459895 CLPSL2Q6UWE3 100 aa8.6□□□□□ -1.03
COL18A1-206ENST00000459895 CBLN2Q8IUK8 224 aa8.6□□□□□ -1.03
COL18A1-206ENST00000459895 C20orf78Q9BR46 151 aa8.6□□□□□ -1.03
COL18A1-206ENST00000459895 BIRC6Q9NR09 4857 aa8.6□□□□□ -1.03
COL18A1-206ENST00000459895 UBE2L6O14933 153 aa8.59□□□□□ -1.03
COL18A1-206ENST00000459895 HLA-DQA1P01909 254 aa8.59□□□□□ -1.03
COL18A1-206ENST00000459895 ANGP03950 147 aaKnown RBP8.59□□□□□ -1.03
COL18A1-206ENST00000459895 RPL32P62910 135 aaKnown RBP8.59□□□□□ -1.03
COL18A1-206ENST00000459895 ELOBQ15370 118 aa8.59□□□□□ -1.03
COL18A1-206ENST00000459895 IGLV4-60A0A075B6I1 120 aa8.58□□□□□ -1.04
COL18A1-206ENST00000459895 PHOX2AO14813 284 aa8.58□□□□□ -1.04
COL18A1-206ENST00000459895 ESDP10768 282 aa8.58□□□□□ -1.04
COL18A1-206ENST00000459895 NFE4Q86UQ8 179 aa8.58□□□□□ -1.04
COL18A1-206ENST00000459895 C20orf203Q8NBC4 194 aa8.58□□□□□ -1.04
COL18A1-206ENST00000459895 UBE2WQ96B02 151 aa8.58□□□□□ -1.04
COL18A1-206ENST00000459895 YPEL4Q96NS1 127 aa8.58□□□□□ -1.04
COL18A1-206ENST00000459895 VCYO14598 125 aa8.57□□□□□ -1.04
COL18A1-206ENST00000459895 CRPP02741 224 aa8.57□□□□□ -1.04
COL18A1-206ENST00000459895 FCER1GP30273 86 aa8.57□□□□□ -1.04
COL18A1-206ENST00000459895 KIAA1644Q3SXP7 199 aa8.57□□□□□ -1.04
COL18A1-206ENST00000459895 GNB1LQ9BYB4 327 aa8.57□□□□□ -1.04
COL18A1-206ENST00000459895 LAMTOR2Q9Y2Q5 125 aa8.57□□□□□ -1.04
COL18A1-206ENST00000459895 MT-ND6P03923 174 aa8.56□□□□□ -1.04
COL18A1-206ENST00000459895 FGF6P10767 208 aa8.56□□□□□ -1.04
COL18A1-206ENST00000459895 ENHOQ6UWT2 76 aa8.56□□□□□ -1.04
COL18A1-206ENST00000459895 KIR2DL4Q99706 377 aa8.56□□□□□ -1.04
COL18A1-206ENST00000459895 MRPL18Q9H0U6 180 aaKnown RBP8.56□□□□□ -1.04
COL18A1-206ENST00000459895 MAP1LC3AQ9H492 121 aa8.56□□□□□ -1.04
COL18A1-206ENST00000459895 PRR34Q9NV39 138 aa8.56□□□□□ -1.04
COL18A1-206ENST00000459895 DYNC1H1Q14204 4646 aaKnown RBP8.55□□□□□ -1.04
COL18A1-206ENST00000459895 TRAV8-3A0A0A6YYJ7 113 aa8.55□□□□□ -1.04
COL18A1-206ENST00000459895 TCAPO15273 167 aa8.55□□□□□ -1.04
COL18A1-206ENST00000459895 AMMECR1LQ6DCA0 310 aa8.55□□□□□ -1.04
COL18A1-206ENST00000459895 LINC00269Q8N2A0 174 aa8.55□□□□□ -1.04
COL18A1-206ENST00000459895 DNAH5Q8TE73 4624 aa8.55□□□□□ -1.04
COL18A1-206ENST00000459895 IGKV2D-24A0A075B6R9 120 aa8.54□□□□□ -1.04
COL18A1-206ENST00000459895 LOC389332A0A1B0GUA5 103 aa8.54□□□□□ -1.04
COL18A1-206ENST00000459895 A0A1B0GUV1 79 aa8.54□□□□□ -1.04
COL18A1-206ENST00000459895 H7C423 109 aa8.54□□□□□ -1.04
COL18A1-206ENST00000459895 PSCAO43653 123 aa8.54□□□□□ -1.04
COL18A1-206ENST00000459895 COX19Q49B96 90 aa8.54□□□□□ -1.04
COL18A1-206ENST00000459895 RNASEKQ6P5S7 137 aaKnown RBP8.54□□□□□ -1.04
COL18A1-206ENST00000459895 ZNF25P17030 456 aaPredicted RBP8.53□□□□□ -1.04
COL18A1-206ENST00000459895 REG3AQ06141 175 aa8.53□□□□□ -1.04
COL18A1-206ENST00000459895 WFDC2Q14508 124 aa8.53□□□□□ -1.04
COL18A1-206ENST00000459895 MRPL52Q86TS9 123 aaKnown RBP8.53□□□□□ -1.04
COL18A1-206ENST00000459895 A0A087WTM6 91 aa8.52□□□□□ -1.05
COL18A1-206ENST00000459895 PRSS47A8MTI9 375 aa8.52□□□□□ -1.05
COL18A1-206ENST00000459895 RPL39P62891 51 aaKnown RBP8.52□□□□□ -1.05
COL18A1-206ENST00000459895 Q0VG73 95 aa8.52□□□□□ -1.05
COL18A1-206ENST00000459895 MIAQ16674 131 aa8.52□□□□□ -1.05
COL18A1-206ENST00000459895 Q6ZUT4 128 aa8.52□□□□□ -1.05
COL18A1-206ENST00000459895 MAPKAPK5-AS1Q8N8E1 139 aa8.52□□□□□ -1.05
COL18A1-206ENST00000459895 RMI2Q96E14 147 aa8.52□□□□□ -1.05
COL18A1-206ENST00000459895 ALKBH7Q9BT30 221 aaPredicted RBP8.52□□□□□ -1.05
COL18A1-206ENST00000459895 C1orf43Q9BWL3 253 aa8.52□□□□□ -1.05
COL18A1-206ENST00000459895 SMCO4Q9NRQ5 59 aa8.52□□□□□ -1.05
COL18A1-206ENST00000459895 UBE2D4Q9Y2X8 147 aa8.52□□□□□ -1.05
COL18A1-206ENST00000459895 IGLV10-54A0A075B6I4 117 aa8.51□□□□□ -1.05
COL18A1-206ENST00000459895 IGKV3OR2-268A0A0C4DH90 116 aa8.51□□□□□ -1.05
COL18A1-206ENST00000459895 LRCOL1A6NCL2 159 aa8.51□□□□□ -1.05
COL18A1-206ENST00000459895 LECT2O14960 151 aa8.51□□□□□ -1.05
COL18A1-206ENST00000459895 FABP9Q0Z7S8 132 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms