RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 DEFB104AQ8WTQ1 72 aa9.55□□□□□ -0.88
HSPG2-207ENST00000453796 ISOC2Q96AB3 205 aa9.55□□□□□ -0.88
HSPG2-207ENST00000453796 RPL39LQ96EH5 51 aaKnown RBP9.55□□□□□ -0.88
HSPG2-207ENST00000453796 TMEM243Q9BU79 118 aa9.55□□□□□ -0.88
HSPG2-207ENST00000453796 FAM30AQ9NZY2 134 aa9.55□□□□□ -0.88
HSPG2-207ENST00000453796 A0A1B0GUV1 79 aa9.54□□□□□ -0.88
HSPG2-207ENST00000453796 TMEM241Q24JQ0 296 aa9.54□□□□□ -0.88
HSPG2-207ENST00000453796 Q6ZSA8 131 aa9.54□□□□□ -0.88
HSPG2-207ENST00000453796 SMIM15Q7Z3B0 74 aa9.54□□□□□ -0.88
HSPG2-207ENST00000453796 LINC00269Q8N2A0 174 aa9.54□□□□□ -0.88
HSPG2-207ENST00000453796 IGLV4-60A0A075B6I1 120 aa9.53□□□□□ -0.88
HSPG2-207ENST00000453796 A0A1B0GUT8 65 aa9.53□□□□□ -0.88
HSPG2-207ENST00000453796 COTL1Q14019 142 aa9.53□□□□□ -0.88
HSPG2-207ENST00000453796 CLPSL2Q6UWE3 100 aa9.53□□□□□ -0.88
HSPG2-207ENST00000453796 SMDT1Q9H4I9 107 aa9.53□□□□□ -0.88
HSPG2-207ENST00000453796 VPS13BQ7Z7G8 4022 aa9.53□□□□□ -0.88
HSPG2-207ENST00000453796 TRBV6-5A0A0K0K1A5 114 aa9.52□□□□□ -0.89
HSPG2-207ENST00000453796 GAS8-AS1O95177 125 aa9.52□□□□□ -0.89
HSPG2-207ENST00000453796 HAMPP81172 84 aa9.52□□□□□ -0.89
HSPG2-207ENST00000453796 RNF185Q96GF1 192 aa9.52□□□□□ -0.89
HSPG2-207ENST00000453796 TMEM191AQ9H0A3 160 aa9.52□□□□□ -0.89
HSPG2-207ENST00000453796 NAT8Q9UHE5 227 aa9.52□□□□□ -0.89
HSPG2-207ENST00000453796 EPM2AB3EWF7 344 aa9.51□□□□□ -0.89
HSPG2-207ENST00000453796 AMTP48728 403 aa9.51□□□□□ -0.89
HSPG2-207ENST00000453796 REG3AQ06141 175 aa9.51□□□□□ -0.89
HSPG2-207ENST00000453796 PEA15Q15121 130 aa9.51□□□□□ -0.89
HSPG2-207ENST00000453796 NUP35Q8NFH5 326 aa9.51□□□□□ -0.89
HSPG2-207ENST00000453796 BORCS7Q96B45 105 aa9.51□□□□□ -0.89
HSPG2-207ENST00000453796 SDHAF1A6NFY7 115 aa9.5□□□□□ -0.89
HSPG2-207ENST00000453796 NCR2O95944 276 aa9.5□□□□□ -0.89
HSPG2-207ENST00000453796 HLA-DQA1P01909 254 aa9.5□□□□□ -0.89
HSPG2-207ENST00000453796 RAB4AP20338 218 aa9.5□□□□□ -0.89
HSPG2-207ENST00000453796 ADIRFQ15847 76 aa9.5□□□□□ -0.89
HSPG2-207ENST00000453796 LINC01620Q4KN68 170 aa9.5□□□□□ -0.89
HSPG2-207ENST00000453796 USP17L23D6RBM5 183 aa9.49□□□□□ -0.89
HSPG2-207ENST00000453796 SMR3BP02814 79 aaPredicted RBP9.49□□□□□ -0.89
HSPG2-207ENST00000453796 C14orf177Q52M58 125 aa9.49□□□□□ -0.89
HSPG2-207ENST00000453796 Q5VSD8 79 aa9.49□□□□□ -0.89
HSPG2-207ENST00000453796 TRAV8-4A0A0B4J246 113 aa9.48□□□□□ -0.89
HSPG2-207ENST00000453796 SMIM27A0A1W2PRY6 76 aa9.48□□□□□ -0.89
HSPG2-207ENST00000453796 UBE2L6O14933 153 aa9.48□□□□□ -0.89
HSPG2-207ENST00000453796 AMN1Q8IY45 258 aa9.48□□□□□ -0.89
HSPG2-207ENST00000453796 NAT8BQ9UHF3 227 aa9.48□□□□□ -0.89
HSPG2-207ENST00000453796 IGLV10-54A0A075B6I4 117 aa9.47□□□□□ -0.89
HSPG2-207ENST00000453796 PRSS1P07477 247 aa9.47□□□□□ -0.89
HSPG2-207ENST00000453796 RPS10P46783 165 aaKnown RBP9.47□□□□□ -0.89
HSPG2-207ENST00000453796 POLR2KP53803 58 aaKnown RBP9.47□□□□□ -0.89
HSPG2-207ENST00000453796 RIGQ13278 110 aa9.47□□□□□ -0.89
HSPG2-207ENST00000453796 MRAP2Q96G30 205 aa9.47□□□□□ -0.89
HSPG2-207ENST00000453796 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.46□□□□□ -0.9
HSPG2-207ENST00000453796 IGKV2-29A2NJV5 120 aaPredicted RBP9.46□□□□□ -0.9
HSPG2-207ENST00000453796 H7C423 109 aa9.46□□□□□ -0.9
HSPG2-207ENST00000453796 I3L3M4 83 aa9.46□□□□□ -0.9
HSPG2-207ENST00000453796 APCSP02743 223 aa9.46□□□□□ -0.9
HSPG2-207ENST00000453796 ST20Q9HBF5 79 aa9.46□□□□□ -0.9
HSPG2-207ENST00000453796 TRBV27A0A0K0K1C4 114 aa9.45□□□□□ -0.9
HSPG2-207ENST00000453796 TSHBP01222 138 aa9.45□□□□□ -0.9
HSPG2-207ENST00000453796 ESDP10768 282 aa9.45□□□□□ -0.9
HSPG2-207ENST00000453796 PMCHP20382 165 aa9.45□□□□□ -0.9
HSPG2-207ENST00000453796 DGAT2L7PQ6IED9 249 aa9.44□□□□□ -0.9
HSPG2-207ENST00000453796 NRACQ8N912 160 aa9.44□□□□□ -0.9
HSPG2-207ENST00000453796 SMKR1H3BMG3 65 aa9.43□□□□□ -0.9
HSPG2-207ENST00000453796 FGF6P10767 208 aa9.43□□□□□ -0.9
HSPG2-207ENST00000453796 FAM104BQ5XKR9 115 aa9.43□□□□□ -0.9
HSPG2-207ENST00000453796 SCXQ7RTU7 201 aa9.43□□□□□ -0.9
HSPG2-207ENST00000453796 TMEM242Q9NWH2 141 aa9.43□□□□□ -0.9
HSPG2-207ENST00000453796 FAM229AH3BQW9 127 aa9.42□□□□□ -0.9
HSPG2-207ENST00000453796 ZNF25P17030 456 aaPredicted RBP9.42□□□□□ -0.9
HSPG2-207ENST00000453796 MRPL51Q4U2R6 128 aaKnown RBP9.42□□□□□ -0.9
HSPG2-207ENST00000453796 AMMECR1LQ6DCA0 310 aa9.42□□□□□ -0.9
HSPG2-207ENST00000453796 C9orf163Q8N9P6 203 aa9.42□□□□□ -0.9
HSPG2-207ENST00000453796 CLRN3Q8NCR9 226 aa9.42□□□□□ -0.9
HSPG2-207ENST00000453796 A0A1B0GW15 77 aa9.41□□□□□ -0.9
HSPG2-207ENST00000453796 A0A1B0GXF2 115 aa9.41□□□□□ -0.9
HSPG2-207ENST00000453796 INAFM2P0DMQ5 153 aa9.41□□□□□ -0.9
HSPG2-207ENST00000453796 RNASEKQ6P5S7 137 aaKnown RBP9.41□□□□□ -0.9
HSPG2-207ENST00000453796 CHAC1Q9BUX1 264 aa9.41□□□□□ -0.9
HSPG2-207ENST00000453796 PPP1R17O96001 155 aa9.4□□□□□ -0.9
HSPG2-207ENST00000453796 CAMPP49913 170 aa9.4□□□□□ -0.9
HSPG2-207ENST00000453796 SUMO2P61956 95 aaKnown RBP9.4□□□□□ -0.9
HSPG2-207ENST00000453796 CNBPP62633 177 aaKnown RBP9.4□□□□□ -0.9
HSPG2-207ENST00000453796 MRPL52Q86TS9 123 aaKnown RBP9.4□□□□□ -0.9
HSPG2-207ENST00000453796 OR5A1Q8NGJ0 315 aa9.4□□□□□ -0.9
HSPG2-207ENST00000453796 SRRM2Q9UQ35 2752 aaKnown RBP9.4□□□□□ -0.91
HSPG2-207ENST00000453796 IGKV3OR2-268A0A0C4DH90 116 aa9.39□□□□□ -0.91
HSPG2-207ENST00000453796 GAGE12HA6NDE8 117 aa9.39□□□□□ -0.91
HSPG2-207ENST00000453796 VCYO14598 125 aa9.39□□□□□ -0.91
HSPG2-207ENST00000453796 SLPIP03973 132 aa9.39□□□□□ -0.91
HSPG2-207ENST00000453796 C15orf56Q8N910 161 aa9.39□□□□□ -0.91
HSPG2-207ENST00000453796 CIRBP-AS1Q8TBR5 109 aa9.39□□□□□ -0.91
HSPG2-207ENST00000453796 TRBV24-1A0A075B6N3 115 aa9.38□□□□□ -0.91
HSPG2-207ENST00000453796 C7orf77A4D0Y5 90 aa9.38□□□□□ -0.91
HSPG2-207ENST00000453796 LINC00862A6NCI5 91 aa9.38□□□□□ -0.91
HSPG2-207ENST00000453796 PPP1R2P9O14990 202 aa9.38□□□□□ -0.91
HSPG2-207ENST00000453796 RAB14P61106 215 aa9.38□□□□□ -0.91
HSPG2-207ENST00000453796 HBBP68871 147 aa9.38□□□□□ -0.91
HSPG2-207ENST00000453796 CLLU1Q5K131 121 aa9.38□□□□□ -0.91
HSPG2-207ENST00000453796 MRPL54Q6P161 138 aaKnown RBP9.38□□□□□ -0.91
HSPG2-207ENST00000453796 LINC00528Q8N1L1 170 aa9.38□□□□□ -0.91
HSPG2-207ENST00000453796 CHCHD10Q8WYQ3 142 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms