RNA–Protein interactions for RNA: ENST00000424643.3

SDCBPP2-201, Transcript of syndecan binding protein pseudogene 2, humanhuman

BASIC

Gene SDCBPP2, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP2-201ENST00000424643 HIST1H1AQ02539 215 aaPredicted RBP2.65□□□□□ -1.99
SDCBPP2-201ENST00000424643 SLAQ13239 276 aa2.65□□□□□ -1.99
SDCBPP2-201ENST00000424643 RBMY1FQ15415 496 aaKnown RBP2.65□□□□□ -1.99
SDCBPP2-201ENST00000424643 FAM162BQ5T6X4 162 aa2.65□□□□□ -1.99
SDCBPP2-201ENST00000424643 FOXI2Q6ZQN5 318 aa2.65□□□□□ -1.99
SDCBPP2-201ENST00000424643 NUP35Q8NFH5 326 aa2.65□□□□□ -1.99
SDCBPP2-201ENST00000424643 Q8TAT8 98 aa2.65□□□□□ -1.99
SDCBPP2-201ENST00000424643 LINC00467Q9BRT7 94 aa2.65□□□□□ -1.99
SDCBPP2-201ENST00000424643 RPP21Q9H633 154 aaKnown RBP2.65□□□□□ -1.99
SDCBPP2-201ENST00000424643 BIN3Q9NQY0 253 aa2.65□□□□□ -1.99
SDCBPP2-201ENST00000424643 HLA-DRB4X5D2U9 266 aa2.65□□□□□ -1.99
SDCBPP2-201ENST00000424643 IGKV3-7A0A075B6H7 116 aa2.64□□□□□ -1.99
SDCBPP2-201ENST00000424643 SMIM26A0A096LP01 95 aa2.64□□□□□ -1.99
SDCBPP2-201ENST00000424643 IGHV3OR16-9A0A0B4J2B5 98 aa2.64□□□□□ -1.99
SDCBPP2-201ENST00000424643 A0A1B0GVX0 72 aa2.64□□□□□ -1.99
SDCBPP2-201ENST00000424643 OR4C46A6NHA9 309 aa2.64□□□□□ -1.99
SDCBPP2-201ENST00000424643 A8MWL6 223 aa2.64□□□□□ -1.99
SDCBPP2-201ENST00000424643 SNAI2O43623 268 aa2.64□□□□□ -1.99
SDCBPP2-201ENST00000424643 GATCO43716 136 aaKnown RBP2.64□□□□□ -1.99
SDCBPP2-201ENST00000424643 ZNF688P0C7X2 276 aa2.64□□□□□ -1.99
SDCBPP2-201ENST00000424643 SNRPD3P62318 126 aaKnown RBP2.64□□□□□ -1.99
SDCBPP2-201ENST00000424643 RPL19P84098 196 aaKnown RBP2.64□□□□□ -1.99
SDCBPP2-201ENST00000424643 SMUG1Q53HV7 270 aa2.64□□□□□ -1.99
SDCBPP2-201ENST00000424643 PSMG4Q5JS54 123 aa2.64□□□□□ -1.99
SDCBPP2-201ENST00000424643 ACTL10Q5JWF8 245 aa2.64□□□□□ -1.99
SDCBPP2-201ENST00000424643 TMEM78Q5T7P6 136 aa2.64□□□□□ -1.99
SDCBPP2-201ENST00000424643 RASL11AQ6T310 242 aa2.64□□□□□ -1.99
SDCBPP2-201ENST00000424643 TMEM136Q6ZRR5 245 aa2.64□□□□□ -1.99
SDCBPP2-201ENST00000424643 ATP5L2Q7Z4Y8 100 aa2.64□□□□□ -1.99
SDCBPP2-201ENST00000424643 ZNF738Q8NE65 137 aa2.64□□□□□ -1.99
SDCBPP2-201ENST00000424643 BTF3L4Q96K17 158 aa2.64□□□□□ -1.99
SDCBPP2-201ENST00000424643 GNB1LQ9BYB4 327 aa2.64□□□□□ -1.99
SDCBPP2-201ENST00000424643 PKD1L1Q8TDX9 2849 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 IGLV1-50A0A075B6I6 118 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 ZNF705GA8MUZ8 300 aaPredicted RBP2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 HIGD1CA8MV81 97 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 HIST1H2BKO60814 126 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 P01737 135 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 PRB2P02812 416 aaPredicted RBP2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 TRGC2P03986 189 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 HIST1H2BJP06899 126 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 CD7P09564 240 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 OR5AL1P0C617 328 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 GZMBP10144 247 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 MGST1P10620 155 aaKnown RBP2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 RNASE3P12724 160 aaKnown RBP2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 HIST1H2BOP23527 126 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 HIST1H2BBP33778 126 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 CMC4P56277 68 aaPredicted RBP2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 HIST1H2BDP58876 126 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 LINC00315P59091 139 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 DEFB131AP59861 70 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 KRTAP12-2P59991 146 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 HIST1H2BCP62807 126 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 DEFA6Q01524 100 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 HIST2H2BEQ16778 126 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 DEFB116Q30KQ4 102 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 KRTAP11-1Q8IUC1 163 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 C1orf158Q8N1D5 194 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 C15orf56Q8N910 161 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 OR2D3Q8NGH3 330 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 FRZBQ92765 325 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 HIST1H2BHQ93079 126 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 PTH2Q96A98 100 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 HIST1H2BNQ99877 126 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 HIST1H2BMQ99879 126 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 C20orf144Q9BQM9 153 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 NAT8BQ9UHF3 227 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 URGCP-MRPS24S4R325 110 aa2.63□□□□□ -1.99
SDCBPP2-201ENST00000424643 TRAV21A0A0B4J279 112 aa2.62□□□□□ -1.99
SDCBPP2-201ENST00000424643 LOC105371267A0A1B0GV96 52 aa2.62□□□□□ -1.99
SDCBPP2-201ENST00000424643 C7orf71A4D174 169 aa2.62□□□□□ -1.99
SDCBPP2-201ENST00000424643 TMEM189A5PLL7 270 aa2.62□□□□□ -1.99
SDCBPP2-201ENST00000424643 KNCNA6PVL3 124 aa2.62□□□□□ -1.99
SDCBPP2-201ENST00000424643 F2Z2F3 143 aa2.62□□□□□ -1.99
SDCBPP2-201ENST00000424643 GNRH2O43555 120 aa2.62□□□□□ -1.99
SDCBPP2-201ENST00000424643 GPX1P07203 203 aa2.62□□□□□ -1.99
SDCBPP2-201ENST00000424643 ARMS2P0C7Q2 107 aa2.62□□□□□ -1.99
SDCBPP2-201ENST00000424643 S100PP25815 95 aa2.62□□□□□ -1.99
SDCBPP2-201ENST00000424643 RPS20P60866 119 aaKnown RBP2.62□□□□□ -1.99
SDCBPP2-201ENST00000424643 COX19Q49B96 90 aa2.62□□□□□ -1.99
SDCBPP2-201ENST00000424643 LYZL1Q6UWQ5 148 aa2.62□□□□□ -1.99
SDCBPP2-201ENST00000424643 DEFB125Q8N687 156 aa2.62□□□□□ -1.99
SDCBPP2-201ENST00000424643 DYNLRB2Q8TF09 96 aa2.62□□□□□ -1.99
SDCBPP2-201ENST00000424643 CAMK2N2Q96S95 79 aa2.62□□□□□ -1.99
SDCBPP2-201ENST00000424643 NDFIP1Q9BT67 221 aa2.62□□□□□ -1.99
SDCBPP2-201ENST00000424643 MAP1LC3CQ9BXW4 147 aa2.62□□□□□ -1.99
SDCBPP2-201ENST00000424643 U3KQK5 164 aa2.62□□□□□ -1.99
SDCBPP2-201ENST00000424643 VWFP04275 2813 aa2.61□□□□□ -1.99
SDCBPP2-201ENST00000424643 NACAE9PAV3 2078 aa2.61□□□□□ -1.99
SDCBPP2-201ENST00000424643 IGLV4-69A0A075B6H9 119 aa2.61□□□□□ -1.99
SDCBPP2-201ENST00000424643 TRAV12-3A0A0B4J271 114 aa2.61□□□□□ -1.99
SDCBPP2-201ENST00000424643 A0A1B0GUT8 65 aa2.61□□□□□ -1.99
SDCBPP2-201ENST00000424643 A0A1B0GW15 77 aa2.61□□□□□ -1.99
SDCBPP2-201ENST00000424643 OR11H12B2RN74 326 aa2.61□□□□□ -1.99
SDCBPP2-201ENST00000424643 M0R2Z0 102 aa2.61□□□□□ -1.99
SDCBPP2-201ENST00000424643 HLA-DQA1P01909 254 aa2.61□□□□□ -1.99
SDCBPP2-201ENST00000424643 MT-ND6P03923 174 aa2.61□□□□□ -1.99
SDCBPP2-201ENST00000424643 TRGC1P0CF51 173 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms