RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 ELOBQ15370 118 aa17.17■□□□□ 0.34
TSPAN3-203ENST00000424443 NRACQ8N912 160 aa17.17■□□□□ 0.34
TSPAN3-203ENST00000424443 SUMO2P61956 95 aaKnown RBP17.16■□□□□ 0.34
TSPAN3-203ENST00000424443 GAGE6Q13070 117 aa17.16■□□□□ 0.34
TSPAN3-203ENST00000424443 PRSS29PA6NIE9 313 aa17.16■□□□□ 0.34
TSPAN3-203ENST00000424443 APCSP02743 223 aa17.16■□□□□ 0.34
TSPAN3-203ENST00000424443 ORMDL3Q8N138 153 aa17.16■□□□□ 0.34
TSPAN3-203ENST00000424443 VCYO14598 125 aa17.15■□□□□ 0.34
TSPAN3-203ENST00000424443 POLR2KP53803 58 aaKnown RBP17.15■□□□□ 0.34
TSPAN3-203ENST00000424443 TNFRSF6BO95407 300 aa17.14■□□□□ 0.33
TSPAN3-203ENST00000424443 LAGE3Q14657 143 aa17.14■□□□□ 0.33
TSPAN3-203ENST00000424443 TMEM136Q6ZRR5 245 aa17.14■□□□□ 0.33
TSPAN3-203ENST00000424443 Q9HAA7 133 aa17.14■□□□□ 0.33
TSPAN3-203ENST00000424443 MPV17L2Q567V2 206 aa17.13■□□□□ 0.33
TSPAN3-203ENST00000424443 C20orf78Q9BR46 151 aa17.13■□□□□ 0.33
TSPAN3-203ENST00000424443 KLK12Q9UKR0 248 aa17.13■□□□□ 0.33
TSPAN3-203ENST00000424443 TRBV24-1A0A075B6N3 115 aa17.12■□□□□ 0.33
TSPAN3-203ENST00000424443 TRBV27A0A0K0K1C4 114 aa17.12■□□□□ 0.33
TSPAN3-203ENST00000424443 ATRAIDQ6UW56 229 aa17.12■□□□□ 0.33
TSPAN3-203ENST00000424443 PRELID3AQ96N28 172 aa17.12■□□□□ 0.33
TSPAN3-203ENST00000424443 PHOX2AO14813 284 aa17.11■□□□□ 0.33
TSPAN3-203ENST00000424443 FCER1GP30273 86 aa17.11■□□□□ 0.33
TSPAN3-203ENST00000424443 KIR2DL4Q99706 377 aa17.11■□□□□ 0.33
TSPAN3-203ENST00000424443 TRAV8-3A0A0A6YYJ7 113 aa17.11■□□□□ 0.33
TSPAN3-203ENST00000424443 ANGP03950 147 aaKnown RBP17.11■□□□□ 0.33
TSPAN3-203ENST00000424443 DNAH2Q9P225 4427 aa17.1■□□□□ 0.33
TSPAN3-203ENST00000424443 COX19Q49B96 90 aa17.1■□□□□ 0.33
TSPAN3-203ENST00000424443 Q8N976 141 aa17.1■□□□□ 0.33
TSPAN3-203ENST00000424443 TSHBP01222 138 aa17.09■□□□□ 0.33
TSPAN3-203ENST00000424443 NPYP01303 97 aa17.09■□□□□ 0.33
TSPAN3-203ENST00000424443 HLA-DQA1P01909 254 aa17.09■□□□□ 0.33
TSPAN3-203ENST00000424443 RBX1P62877 108 aa17.09■□□□□ 0.33
TSPAN3-203ENST00000424443 PSCAO43653 123 aa17.08■□□□□ 0.32
TSPAN3-203ENST00000424443 CRPP02741 224 aa17.08■□□□□ 0.32
TSPAN3-203ENST00000424443 UBE2WQ96B02 151 aa17.08■□□□□ 0.32
TSPAN3-203ENST00000424443 GNB1LQ9BYB4 327 aa17.08■□□□□ 0.32
TSPAN3-203ENST00000424443 LAMTOR2Q9Y2Q5 125 aa17.08■□□□□ 0.32
TSPAN3-203ENST00000424443 AMMECR1LQ6DCA0 310 aa17.07■□□□□ 0.32
TSPAN3-203ENST00000424443 RPL32P62910 135 aaKnown RBP17.06■□□□□ 0.32
TSPAN3-203ENST00000424443 DNAH10Q8IVF4 4471 aa17.06■□□□□ 0.32
TSPAN3-203ENST00000424443 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.06■□□□□ 0.32
TSPAN3-203ENST00000424443 IGKV2-29A2NJV5 120 aaPredicted RBP17.06■□□□□ 0.32
TSPAN3-203ENST00000424443 H7C423 109 aa17.06■□□□□ 0.32
TSPAN3-203ENST00000424443 TCAPO15273 167 aa17.06■□□□□ 0.32
TSPAN3-203ENST00000424443 TNP2Q05952 138 aa17.06■□□□□ 0.32
TSPAN3-203ENST00000424443 Q0VG73 95 aa17.06■□□□□ 0.32
TSPAN3-203ENST00000424443 Q6ZRN7 208 aaPredicted RBP17.06■□□□□ 0.32
TSPAN3-203ENST00000424443 RMI2Q96E14 147 aa17.06■□□□□ 0.32
TSPAN3-203ENST00000424443 SMIM2Q9BVW6 85 aa17.06■□□□□ 0.32
TSPAN3-203ENST00000424443 TM2D2Q9BX73 214 aa17.06■□□□□ 0.32
TSPAN3-203ENST00000424443 A0A1B0GUV1 79 aa17.05■□□□□ 0.32
TSPAN3-203ENST00000424443 MT-ND6P03923 174 aa17.04■□□□□ 0.32
TSPAN3-203ENST00000424443 MAP1LC3AQ9H492 121 aa17.04■□□□□ 0.32
TSPAN3-203ENST00000424443 FRAS1Q86XX4 4008 aa17.04■□□□□ 0.32
TSPAN3-203ENST00000424443 TGIF2-C20orf24A0A0A6YYL0 155 aa17.03■□□□□ 0.32
TSPAN3-203ENST00000424443 RNASEKQ6P5S7 137 aaKnown RBP17.03■□□□□ 0.32
TSPAN3-203ENST00000424443 ESDP10768 282 aa17.02■□□□□ 0.32
TSPAN3-203ENST00000424443 COX11Q9Y6N1 276 aa17.02■□□□□ 0.32
TSPAN3-203ENST00000424443 KIAA1644Q3SXP7 199 aa17.01■□□□□ 0.31
TSPAN3-203ENST00000424443 LINC00269Q8N2A0 174 aa17.01■□□□□ 0.31
TSPAN3-203ENST00000424443 IGKV2D-24A0A075B6R9 120 aa17.01■□□□□ 0.31
TSPAN3-203ENST00000424443 LOC389332A0A1B0GUA5 103 aa17.01■□□□□ 0.31
TSPAN3-203ENST00000424443 FGF6P10767 208 aa17.01■□□□□ 0.31
TSPAN3-203ENST00000424443 TMEM101Q96IK0 257 aa17.01■□□□□ 0.31
TSPAN3-203ENST00000424443 IGLV4-60A0A075B6I1 120 aa17■□□□□ 0.31
TSPAN3-203ENST00000424443 EREGO14944 169 aa17■□□□□ 0.31
TSPAN3-203ENST00000424443 RAB5AP20339 215 aa17■□□□□ 0.31
TSPAN3-203ENST00000424443 CLPSL2Q6UWE3 100 aa17■□□□□ 0.31
TSPAN3-203ENST00000424443 C20orf203Q8NBC4 194 aa17■□□□□ 0.31
TSPAN3-203ENST00000424443 TMEM18Q96B42 140 aa17■□□□□ 0.31
TSPAN3-203ENST00000424443 ZNF25P17030 456 aaPredicted RBP16.99■□□□□ 0.31
TSPAN3-203ENST00000424443 SMAGPQ0VAQ4 97 aa16.99■□□□□ 0.31
TSPAN3-203ENST00000424443 FABP9Q0Z7S8 132 aa16.99■□□□□ 0.31
TSPAN3-203ENST00000424443 ENHOQ6UWT2 76 aa16.99■□□□□ 0.31
TSPAN3-203ENST00000424443 MRPL18Q9H0U6 180 aaKnown RBP16.99■□□□□ 0.31
TSPAN3-203ENST00000424443 MIAQ16674 131 aa16.98■□□□□ 0.31
TSPAN3-203ENST00000424443 C1orf43Q9BWL3 253 aa16.98■□□□□ 0.31
TSPAN3-203ENST00000424443 SMCO4Q9NRQ5 59 aa16.98■□□□□ 0.31
TSPAN3-203ENST00000424443 PRSS47A8MTI9 375 aa16.97■□□□□ 0.31
TSPAN3-203ENST00000424443 REG3AQ06141 175 aa16.97■□□□□ 0.31
TSPAN3-203ENST00000424443 PRR34Q9NV39 138 aa16.96■□□□□ 0.31
TSPAN3-203ENST00000424443 TRAPPC1Q9Y5R8 145 aa16.96■□□□□ 0.31
TSPAN3-203ENST00000424443 DGAT2L7PQ6IED9 249 aa16.96■□□□□ 0.3
TSPAN3-203ENST00000424443 OR5A1Q8NGJ0 315 aa16.96■□□□□ 0.3
TSPAN3-203ENST00000424443 CBLN2Q8IUK8 224 aa16.95■□□□□ 0.3
TSPAN3-203ENST00000424443 DNAH17Q9UFH2 4485 aa16.94■□□□□ 0.3
TSPAN3-203ENST00000424443 A0A1B0GVY2 172 aa16.94■□□□□ 0.3
TSPAN3-203ENST00000424443 Q8N8P6 123 aa16.94■□□□□ 0.3
TSPAN3-203ENST00000424443 MRPL52Q86TS9 123 aaKnown RBP16.93■□□□□ 0.3
TSPAN3-203ENST00000424443 NXT2Q9NPJ8 142 aaKnown RBP16.93■□□□□ 0.3
TSPAN3-203ENST00000424443 FAT2Q9NYQ8 4349 aa16.92■□□□□ 0.3
TSPAN3-203ENST00000424443 A0A087WTM6 91 aa16.91■□□□□ 0.3
TSPAN3-203ENST00000424443 IGKV3OR2-268A0A0C4DH90 116 aa16.91■□□□□ 0.3
TSPAN3-203ENST00000424443 ALKBH7Q9BT30 221 aaPredicted RBP16.91■□□□□ 0.3
TSPAN3-203ENST00000424443 TRAV8-4A0A0B4J246 113 aa16.91■□□□□ 0.3
TSPAN3-203ENST00000424443 YPEL4Q96NS1 127 aa16.9■□□□□ 0.3
TSPAN3-203ENST00000424443 IGLV10-54A0A075B6I4 117 aa16.89■□□□□ 0.29
TSPAN3-203ENST00000424443 K7EMI3 77 aa16.89■□□□□ 0.29
TSPAN3-203ENST00000424443 IFI27P40305 119 aaPredicted RBP16.89■□□□□ 0.29
TSPAN3-203ENST00000424443 ORMDL2Q53FV1 153 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms