RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 SUMO4Q6EEV6 95 aa10.4□□□□□ -0.74
COL18A1-205ENST00000423214 CLRN3Q8NCR9 226 aa10.4□□□□□ -0.74
COL18A1-205ENST00000423214 RPP21Q9H633 154 aaKnown RBP10.4□□□□□ -0.74
COL18A1-205ENST00000423214 PLA2G2DQ9UNK4 145 aa10.4□□□□□ -0.74
COL18A1-205ENST00000423214 hDV102S1A0JD36 115 aa10.39□□□□□ -0.75
COL18A1-205ENST00000423214 TMEM250H0YL14 139 aa10.39□□□□□ -0.75
COL18A1-205ENST00000423214 KRTAP26-1Q6PEX3 210 aa10.39□□□□□ -0.75
COL18A1-205ENST00000423214 TMEM243Q9BU79 118 aa10.39□□□□□ -0.75
COL18A1-205ENST00000423214 EIF5A2Q9GZV4 153 aaKnown RBP10.39□□□□□ -0.75
COL18A1-205ENST00000423214 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.39□□□□□ -0.75
COL18A1-205ENST00000423214 HMCN2Q8NDA2 5059 aa10.38□□□□□ -0.75
COL18A1-205ENST00000423214 TRGC1P0CF51 173 aa10.38□□□□□ -0.75
COL18A1-205ENST00000423214 TWIST1Q15672 202 aa10.38□□□□□ -0.75
COL18A1-205ENST00000423214 TRAV8-4A0A0B4J246 113 aa10.37□□□□□ -0.75
COL18A1-205ENST00000423214 UBE2L6O14933 153 aa10.37□□□□□ -0.75
COL18A1-205ENST00000423214 GATCO43716 136 aaKnown RBP10.37□□□□□ -0.75
COL18A1-205ENST00000423214 CTRLP40313 264 aa10.37□□□□□ -0.75
COL18A1-205ENST00000423214 HNRNPA3P51991 378 aaKnown RBP10.37□□□□□ -0.75
COL18A1-205ENST00000423214 WDR73Q6P4I2 378 aa10.37□□□□□ -0.75
COL18A1-205ENST00000423214 RASL11AQ6T310 242 aa10.37□□□□□ -0.75
COL18A1-205ENST00000423214 GTSF1Q8WW33 167 aa10.37□□□□□ -0.75
COL18A1-205ENST00000423214 DPH3P1Q9H4G8 78 aa10.37□□□□□ -0.75
COL18A1-205ENST00000423214 AP5S1Q9NUS5 200 aa10.37□□□□□ -0.75
COL18A1-205ENST00000423214 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.36□□□□□ -0.75
COL18A1-205ENST00000423214 CNBPP62633 177 aaKnown RBP10.36□□□□□ -0.75
COL18A1-205ENST00000423214 C20orf203Q8NBC4 194 aa10.36□□□□□ -0.75
COL18A1-205ENST00000423214 IGHV3-64A0A075B6Q5 118 aa10.35□□□□□ -0.75
COL18A1-205ENST00000423214 PANO1I0J062 215 aa10.35□□□□□ -0.75
COL18A1-205ENST00000423214 SDIM1Q6ZPB5 146 aa10.35□□□□□ -0.75
COL18A1-205ENST00000423214 FAM210AQ96ND0 272 aa10.35□□□□□ -0.75
COL18A1-205ENST00000423214 SMIM7Q9BQ49 75 aa10.35□□□□□ -0.75
COL18A1-205ENST00000423214 IGLV4-60A0A075B6I1 120 aa10.34□□□□□ -0.75
COL18A1-205ENST00000423214 A0A1B0GUV1 79 aa10.34□□□□□ -0.75
COL18A1-205ENST00000423214 SRP19P09132 144 aaKnown RBP10.34□□□□□ -0.75
COL18A1-205ENST00000423214 AMTP48728 403 aa10.34□□□□□ -0.75
COL18A1-205ENST00000423214 FOXA3P55318 350 aaPredicted RBP10.34□□□□□ -0.75
COL18A1-205ENST00000423214 PGLYRP4Q96LB8 373 aa10.34□□□□□ -0.75
COL18A1-205ENST00000423214 CNFNQ9BYD5 112 aa10.34□□□□□ -0.75
COL18A1-205ENST00000423214 NIT2Q9NQR4 276 aa10.34□□□□□ -0.75
COL18A1-205ENST00000423214 TRAV26-2A0A0B4J265 109 aa10.33□□□□□ -0.76
COL18A1-205ENST00000423214 ZNF727A8MUV8 499 aa10.33□□□□□ -0.76
COL18A1-205ENST00000423214 COTL1Q14019 142 aa10.33□□□□□ -0.76
COL18A1-205ENST00000423214 FAM231DQ6ZW35 169 aa10.33□□□□□ -0.76
COL18A1-205ENST00000423214 DPH3Q96FX2 82 aa10.33□□□□□ -0.76
COL18A1-205ENST00000423214 A8MWL6 223 aa10.32□□□□□ -0.76
COL18A1-205ENST00000423214 CIRBPQ14011 172 aaKnown RBP10.32□□□□□ -0.76
COL18A1-205ENST00000423214 LINC01551Q86U37 167 aa10.32□□□□□ -0.76
COL18A1-205ENST00000423214 GATD1Q8NB37 220 aa10.32□□□□□ -0.76
COL18A1-205ENST00000423214 GFRA4Q9GZZ7 299 aa10.32□□□□□ -0.76
COL18A1-205ENST00000423214 RNF185Q96GF1 192 aa10.31□□□□□ -0.76
COL18A1-205ENST00000423214 CHTF8P0CG12 524 aa10.3□□□□□ -0.76
COL18A1-205ENST00000423214 SMIM15Q7Z3B0 74 aa10.3□□□□□ -0.76
COL18A1-205ENST00000423214 RPL39LQ96EH5 51 aaKnown RBP10.3□□□□□ -0.76
COL18A1-205ENST00000423214 IGKV3OR2-268A0A0C4DH90 116 aa10.29□□□□□ -0.76
COL18A1-205ENST00000423214 NDUFS6O75380 124 aaKnown RBP10.29□□□□□ -0.76
COL18A1-205ENST00000423214 Q6ZRU5 148 aa10.29□□□□□ -0.76
COL18A1-205ENST00000423214 SPACA4Q8TDM5 124 aa10.29□□□□□ -0.76
COL18A1-205ENST00000423214 A0A087WYN8 130 aa10.28□□□□□ -0.76
COL18A1-205ENST00000423214 GAGE12HA6NDE8 117 aa10.28□□□□□ -0.76
COL18A1-205ENST00000423214 C9JQL5 133 aa10.28□□□□□ -0.76
COL18A1-205ENST00000423214 SRSF3P84103 164 aaKnown RBP10.28□□□□□ -0.76
COL18A1-205ENST00000423214 CT83Q5H943 113 aa10.28□□□□□ -0.76
COL18A1-205ENST00000423214 AMMECR1LQ6DCA0 310 aa10.28□□□□□ -0.76
COL18A1-205ENST00000423214 CFAP161Q6P656 301 aa10.28□□□□□ -0.76
COL18A1-205ENST00000423214 TEX261Q6UWH6 196 aa10.28□□□□□ -0.76
COL18A1-205ENST00000423214 UBR4Q5T4S7 5183 aa10.28□□□□□ -0.76
COL18A1-205ENST00000423214 HIGD1CA8MV81 97 aa10.27□□□□□ -0.77
COL18A1-205ENST00000423214 C7orf33Q8WU49 177 aa10.27□□□□□ -0.77
COL18A1-205ENST00000423214 TSKUQ8WUA8 353 aa10.27□□□□□ -0.77
COL18A1-205ENST00000423214 OSTCQ9NRP0 149 aa10.27□□□□□ -0.77
COL18A1-205ENST00000423214 TMEM241Q24JQ0 296 aa10.26□□□□□ -0.77
COL18A1-205ENST00000423214 C15orf56Q8N910 161 aa10.26□□□□□ -0.77
COL18A1-205ENST00000423214 BORCS7Q96B45 105 aa10.26□□□□□ -0.77
COL18A1-205ENST00000423214 A0A1B0GUT8 65 aa10.25□□□□□ -0.77
COL18A1-205ENST00000423214 GAS8-AS1O95177 125 aa10.25□□□□□ -0.77
COL18A1-205ENST00000423214 SLPIP03973 132 aa10.25□□□□□ -0.77
COL18A1-205ENST00000423214 RPL23P62829 140 aaKnown RBP10.25□□□□□ -0.77
COL18A1-205ENST00000423214 HIGD2BQ4VC39 106 aa10.25□□□□□ -0.77
COL18A1-205ENST00000423214 RNASEKQ6P5S7 137 aaKnown RBP10.25□□□□□ -0.77
COL18A1-205ENST00000423214 V9GYV3 84 aa10.25□□□□□ -0.77
COL18A1-205ENST00000423214 PHOX2AO14813 284 aa10.24□□□□□ -0.77
COL18A1-205ENST00000423214 APCSP02743 223 aa10.24□□□□□ -0.77
COL18A1-205ENST00000423214 MT1HL1P0DM35 61 aa10.24□□□□□ -0.77
COL18A1-205ENST00000423214 RPS10P46783 165 aaKnown RBP10.24□□□□□ -0.77
COL18A1-205ENST00000423214 ISOC2Q96AB3 205 aa10.24□□□□□ -0.77
COL18A1-205ENST00000423214 PLAC8Q9NZF1 115 aa10.24□□□□□ -0.77
COL18A1-205ENST00000423214 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.23□□□□□ -0.77
COL18A1-205ENST00000423214 IGKV2-24A0A0C4DH68 120 aa10.23□□□□□ -0.77
COL18A1-205ENST00000423214 IGKV2-29A2NJV5 120 aaPredicted RBP10.23□□□□□ -0.77
COL18A1-205ENST00000423214 NCR2O95944 276 aa10.23□□□□□ -0.77
COL18A1-205ENST00000423214 COX6A2Q02221 97 aa10.23□□□□□ -0.77
COL18A1-205ENST00000423214 PEA15Q15121 130 aa10.23□□□□□ -0.77
COL18A1-205ENST00000423214 ADIRFQ15847 76 aa10.23□□□□□ -0.77
COL18A1-205ENST00000423214 FAM74A3Q4VXF1 159 aa10.23□□□□□ -0.77
COL18A1-205ENST00000423214 CHCHD10Q8WYQ3 142 aaPredicted RBP10.23□□□□□ -0.77
COL18A1-205ENST00000423214 SDHAF1A6NFY7 115 aa10.22□□□□□ -0.77
COL18A1-205ENST00000423214 MAJINQ3KP22 176 aa10.22□□□□□ -0.77
COL18A1-205ENST00000423214 NUP35Q8NFH5 326 aa10.22□□□□□ -0.77
COL18A1-205ENST00000423214 TMEM191AQ9H0A3 160 aa10.22□□□□□ -0.77
COL18A1-205ENST00000423214 NAT8Q9UHE5 227 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms