RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 SERTAD4-AS1Q5TG53 156 aa11.09□□□□□ -0.63
HMGN1-204ENST00000380749 AP5S1Q9NUS5 200 aa11.09□□□□□ -0.63
HMGN1-204ENST00000380749 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.09□□□□□ -0.63
HMGN1-204ENST00000380749 TAGLN2P37802 199 aaKnown RBP11.08□□□□□ -0.64
HMGN1-204ENST00000380749 AMTP48728 403 aa11.08□□□□□ -0.64
HMGN1-204ENST00000380749 IGLV4-60A0A075B6I1 120 aa11.07□□□□□ -0.64
HMGN1-204ENST00000380749 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.07□□□□□ -0.64
HMGN1-204ENST00000380749 C9orf62Q8N4C0 152 aa11.07□□□□□ -0.64
HMGN1-204ENST00000380749 TWIST1Q15672 202 aa11.06□□□□□ -0.64
HMGN1-204ENST00000380749 SDIM1Q6ZPB5 146 aa11.06□□□□□ -0.64
HMGN1-204ENST00000380749 NUDT10Q8NFP7 164 aa11.06□□□□□ -0.64
HMGN1-204ENST00000380749 NUDT11Q96G61 164 aa11.06□□□□□ -0.64
HMGN1-204ENST00000380749 CNFNQ9BYD5 112 aa11.06□□□□□ -0.64
HMGN1-204ENST00000380749 GFRA4Q9GZZ7 299 aa11.06□□□□□ -0.64
HMGN1-204ENST00000380749 RPP21Q9H633 154 aaKnown RBP11.06□□□□□ -0.64
HMGN1-204ENST00000380749 IGHV3-64A0A075B6Q5 118 aa11.05□□□□□ -0.64
HMGN1-204ENST00000380749 SLC51BQ86UW2 128 aa11.05□□□□□ -0.64
HMGN1-204ENST00000380749 TCTE3Q8IZS6 198 aa11.04□□□□□ -0.64
HMGN1-204ENST00000380749 PANO1I0J062 215 aa11.03□□□□□ -0.64
HMGN1-204ENST00000380749 CIRBPQ14011 172 aaKnown RBP11.03□□□□□ -0.64
HMGN1-204ENST00000380749 SMIM15Q7Z3B0 74 aa11.03□□□□□ -0.64
HMGN1-204ENST00000380749 RNASE7Q9H1E1 156 aaKnown RBP11.03□□□□□ -0.64
HMGN1-204ENST00000380749 UBR4Q5T4S7 5183 aa11.03□□□□□ -0.64
HMGN1-204ENST00000380749 TNXBP22105 4242 aa11.02□□□□□ -0.64
HMGN1-204ENST00000380749 TRAV26-2A0A0B4J265 109 aa11.02□□□□□ -0.65
HMGN1-204ENST00000380749 HNRNPA3P51991 378 aaKnown RBP11.02□□□□□ -0.65
HMGN1-204ENST00000380749 AMMECR1LQ6DCA0 310 aa11.02□□□□□ -0.65
HMGN1-204ENST00000380749 CFAP161Q6P656 301 aa11.02□□□□□ -0.65
HMGN1-204ENST00000380749 GATD1Q8NB37 220 aa11.02□□□□□ -0.65
HMGN1-204ENST00000380749 RNF185Q96GF1 192 aa11.02□□□□□ -0.65
HMGN1-204ENST00000380749 IGKV3OR2-268A0A0C4DH90 116 aa11.01□□□□□ -0.65
HMGN1-204ENST00000380749 K7EN84 100 aa11.01□□□□□ -0.65
HMGN1-204ENST00000380749 NCR2O95944 276 aa11.01□□□□□ -0.65
HMGN1-204ENST00000380749 DPH3Q96FX2 82 aa11.01□□□□□ -0.65
HMGN1-204ENST00000380749 GAGE12HA6NDE8 117 aa11□□□□□ -0.65
HMGN1-204ENST00000380749 APCSP02743 223 aa11□□□□□ -0.65
HMGN1-204ENST00000380749 TEX261Q6UWH6 196 aa11□□□□□ -0.65
HMGN1-204ENST00000380749 OCC1Q8TAD7 63 aa11□□□□□ -0.65
HMGN1-204ENST00000380749 RNASEKQ6P5S7 137 aaKnown RBP10.99□□□□□ -0.65
HMGN1-204ENST00000380749 Q6ZNX1 250 aa10.99□□□□□ -0.65
HMGN1-204ENST00000380749 C15orf56Q8N910 161 aa10.99□□□□□ -0.65
HMGN1-204ENST00000380749 SPACA4Q8TDM5 124 aa10.99□□□□□ -0.65
HMGN1-204ENST00000380749 RPL39LQ96EH5 51 aaKnown RBP10.99□□□□□ -0.65
HMGN1-204ENST00000380749 PLA2G2DQ9UNK4 145 aa10.99□□□□□ -0.65
HMGN1-204ENST00000380749 A0A087WYN8 130 aa10.98□□□□□ -0.65
HMGN1-204ENST00000380749 H7C423 109 aa10.98□□□□□ -0.65
HMGN1-204ENST00000380749 CHTF8P0CG12 524 aa10.98□□□□□ -0.65
HMGN1-204ENST00000380749 GTSF1Q8WW33 167 aa10.98□□□□□ -0.65
HMGN1-204ENST00000380749 SDHAF1A6NFY7 115 aa10.97□□□□□ -0.65
HMGN1-204ENST00000380749 TMEM250H0YL14 139 aa10.97□□□□□ -0.65
HMGN1-204ENST00000380749 GATCO43716 136 aaKnown RBP10.97□□□□□ -0.65
HMGN1-204ENST00000380749 SLPIP03973 132 aa10.97□□□□□ -0.65
HMGN1-204ENST00000380749 CHCHD10Q8WYQ3 142 aaPredicted RBP10.97□□□□□ -0.65
HMGN1-204ENST00000380749 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.96□□□□□ -0.65
HMGN1-204ENST00000380749 IGKV2-29A2NJV5 120 aaPredicted RBP10.96□□□□□ -0.65
HMGN1-204ENST00000380749 A8MWL6 223 aa10.96□□□□□ -0.65
HMGN1-204ENST00000380749 RPS10P46783 165 aaKnown RBP10.96□□□□□ -0.65
HMGN1-204ENST00000380749 FGF6P10767 208 aa10.95□□□□□ -0.66
HMGN1-204ENST00000380749 ZNF25P17030 456 aaPredicted RBP10.95□□□□□ -0.66
HMGN1-204ENST00000380749 HIGD2BQ4VC39 106 aa10.95□□□□□ -0.66
HMGN1-204ENST00000380749 Q6ZRU5 148 aa10.95□□□□□ -0.66
HMGN1-204ENST00000380749 BORCS7Q96B45 105 aa10.95□□□□□ -0.66
HMGN1-204ENST00000380749 BLOC1S1P78537 153 aa10.94□□□□□ -0.66
HMGN1-204ENST00000380749 CT83Q5H943 113 aa10.94□□□□□ -0.66
HMGN1-204ENST00000380749 FAM231DQ6ZW35 169 aa10.94□□□□□ -0.66
HMGN1-204ENST00000380749 C7orf33Q8WU49 177 aa10.94□□□□□ -0.66
HMGN1-204ENST00000380749 BTF3L4Q96K17 158 aa10.94□□□□□ -0.66
HMGN1-204ENST00000380749 PLAC8Q9NZF1 115 aa10.94□□□□□ -0.66
HMGN1-204ENST00000380749 GVQW2A0A096LPI5 108 aaPredicted RBP10.93□□□□□ -0.66
HMGN1-204ENST00000380749 I3L3M4 83 aa10.93□□□□□ -0.66
HMGN1-204ENST00000380749 NDUFS6O75380 124 aaKnown RBP10.93□□□□□ -0.66
HMGN1-204ENST00000380749 PMCHP20382 165 aa10.93□□□□□ -0.66
HMGN1-204ENST00000380749 FOXA3P55318 350 aaPredicted RBP10.93□□□□□ -0.66
HMGN1-204ENST00000380749 COX6A2Q02221 97 aa10.93□□□□□ -0.66
HMGN1-204ENST00000380749 TMEM101Q96IK0 257 aa10.93□□□□□ -0.66
HMGN1-204ENST00000380749 CEBPGP53567 150 aa10.92□□□□□ -0.66
HMGN1-204ENST00000380749 OR5A1Q8NGJ0 315 aa10.92□□□□□ -0.66
HMGN1-204ENST00000380749 TRBV6-5A0A0K0K1A5 114 aa10.91□□□□□ -0.66
HMGN1-204ENST00000380749 ALKAL2Q6UX46 152 aa10.91□□□□□ -0.66
HMGN1-204ENST00000380749 AKAP14Q86UN6 197 aa10.91□□□□□ -0.66
HMGN1-204ENST00000380749 MRAP2Q96G30 205 aa10.91□□□□□ -0.66
HMGN1-204ENST00000380749 PKIGQ9Y2B9 76 aa10.91□□□□□ -0.66
HMGN1-204ENST00000380749 IGKV2-24A0A0C4DH68 120 aa10.9□□□□□ -0.66
HMGN1-204ENST00000380749 PHOX2AO14813 284 aa10.9□□□□□ -0.66
HMGN1-204ENST00000380749 MAJINQ3KP22 176 aa10.9□□□□□ -0.66
HMGN1-204ENST00000380749 ST20Q9HBF5 79 aa10.9□□□□□ -0.66
HMGN1-204ENST00000380749 XCL1P47992 114 aa10.9□□□□□ -0.67
HMGN1-204ENST00000380749 FOXI1Q12951 378 aa10.9□□□□□ -0.67
HMGN1-204ENST00000380749 PRSS3P2Q8NHM4 247 aa10.9□□□□□ -0.67
HMGN1-204ENST00000380749 FAM210AQ96ND0 272 aa10.9□□□□□ -0.67
HMGN1-204ENST00000380749 A0A1B0GUT8 65 aa10.89□□□□□ -0.67
HMGN1-204ENST00000380749 HIGD1CA8MV81 97 aa10.89□□□□□ -0.67
HMGN1-204ENST00000380749 SMIM7Q9BQ49 75 aa10.89□□□□□ -0.67
HMGN1-204ENST00000380749 TMEM242Q9NWH2 141 aa10.89□□□□□ -0.67
HMGN1-204ENST00000380749 FAM231BA6NCW3 169 aa10.88□□□□□ -0.67
HMGN1-204ENST00000380749 TSHBP01222 138 aa10.88□□□□□ -0.67
HMGN1-204ENST00000380749 MT1HL1P0DM35 61 aa10.88□□□□□ -0.67
HMGN1-204ENST00000380749 LYPD6BQ8NI32 183 aa10.88□□□□□ -0.67
HMGN1-204ENST00000380749 TSKUQ8WUA8 353 aa10.88□□□□□ -0.67
HMGN1-204ENST00000380749 EIF5A2Q9GZV4 153 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms