RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 KIR2DL5BQ8NHK3 375 aa12.34□□□□□ -0.43
RGP1-201ENST00000378078 IGHV1-58A0A0C4DH39 117 aa12.34□□□□□ -0.43
RGP1-201ENST00000378078 CXCL5P42830 114 aa12.34□□□□□ -0.43
RGP1-201ENST00000378078 LOC100131303A0A0U1RQF7 123 aa12.34□□□□□ -0.43
RGP1-201ENST00000378078 FAM30AQ9NZY2 134 aa12.34□□□□□ -0.43
RGP1-201ENST00000378078 FRMD6-AS1P0C7T7 363 aa12.33□□□□□ -0.43
RGP1-201ENST00000378078 C20orf173Q96LM9 149 aa12.33□□□□□ -0.43
RGP1-201ENST00000378078 IGLV2-11P01706 119 aa12.33□□□□□ -0.44
RGP1-201ENST00000378078 CIRBP-AS1Q8TBR5 109 aa12.33□□□□□ -0.44
RGP1-201ENST00000378078 CLUHP3Q96NS8 147 aa12.33□□□□□ -0.44
RGP1-201ENST00000378078 MED12LQ86YW9 2145 aa12.33□□□□□ -0.44
RGP1-201ENST00000378078 A6NDX4 124 aa12.33□□□□□ -0.44
RGP1-201ENST00000378078 GDF5OSQ5U4N7 250 aa12.33□□□□□ -0.44
RGP1-201ENST00000378078 LENEPQ9Y5L5 61 aa12.32□□□□□ -0.44
RGP1-201ENST00000378078 MED14OSP0DP75 135 aa12.32□□□□□ -0.44
RGP1-201ENST00000378078 BBC3Q96PG8 261 aaPredicted RBP12.32□□□□□ -0.44
RGP1-201ENST00000378078 NOTCH3Q9UM47 2321 aa12.32□□□□□ -0.44
RGP1-201ENST00000378078 JMJD7-PLA2G4BH0Y9G9 81 aa12.32□□□□□ -0.44
RGP1-201ENST00000378078 LOXL1Q08397 574 aaPredicted RBP12.32□□□□□ -0.44
RGP1-201ENST00000378078 A0A0J9YX75 114 aa12.31□□□□□ -0.44
RGP1-201ENST00000378078 SNURFQ9Y675 71 aa12.31□□□□□ -0.44
RGP1-201ENST00000378078 ZNF843Q8N446 348 aa12.31□□□□□ -0.44
RGP1-201ENST00000378078 LY6LH3BQJ8 138 aa12.3□□□□□ -0.44
RGP1-201ENST00000378078 FAM236DA0A1B0GTK5 79 aa12.3□□□□□ -0.44
RGP1-201ENST00000378078 FAM236CP0DP71 79 aa12.3□□□□□ -0.44
RGP1-201ENST00000378078 TEN1Q86WV5 123 aa12.3□□□□□ -0.44
RGP1-201ENST00000378078 Q8N976 141 aa12.29□□□□□ -0.44
RGP1-201ENST00000378078 A0A1W2PNU3 283 aaPredicted RBP12.29□□□□□ -0.44
RGP1-201ENST00000378078 ZFAND3Q9H8U3 227 aa12.29□□□□□ -0.44
RGP1-201ENST00000378078 INSL3P51460 131 aa12.29□□□□□ -0.44
RGP1-201ENST00000378078 A8MZ25 164 aa12.29□□□□□ -0.44
RGP1-201ENST00000378078 ODF3L1Q8IXM7 274 aa12.29□□□□□ -0.44
RGP1-201ENST00000378078 KIAA1549LQ6ZVL6 1849 aa12.29□□□□□ -0.44
RGP1-201ENST00000378078 PLAC8L1A1L4L8 177 aa12.28□□□□□ -0.44
RGP1-201ENST00000378078 TCL1BO95988 128 aa12.28□□□□□ -0.44
RGP1-201ENST00000378078 PRORYQ9H606 182 aa12.28□□□□□ -0.44
RGP1-201ENST00000378078 COL4A3Q01955 1670 aa12.28□□□□□ -0.44
RGP1-201ENST00000378078 NDUFV3P56181 108 aaKnown RBP12.28□□□□□ -0.44
RGP1-201ENST00000378078 CCDC140Q96MF4 163 aa12.28□□□□□ -0.44
RGP1-201ENST00000378078 H3BQ85 93 aa12.28□□□□□ -0.44
RGP1-201ENST00000378078 UFSP1Q6NVU6 142 aa12.28□□□□□ -0.44
RGP1-201ENST00000378078 Q6YL49 198 aa12.27□□□□□ -0.44
RGP1-201ENST00000378078 ZNF80P51504 273 aaPredicted RBP12.27□□□□□ -0.44
RGP1-201ENST00000378078 OXLD1Q5BKU9 147 aa12.27□□□□□ -0.45
RGP1-201ENST00000378078 K7EMT4 169 aa12.26□□□□□ -0.45
RGP1-201ENST00000378078 Q6ZVQ6 151 aa12.26□□□□□ -0.45
RGP1-201ENST00000378078 E9PLD3 99 aa12.26□□□□□ -0.45
RGP1-201ENST00000378078 DAZAP2Q15038 168 aaPredicted RBP12.26□□□□□ -0.45
RGP1-201ENST00000378078 POU2AF1Q16633 256 aa12.26□□□□□ -0.45
RGP1-201ENST00000378078 MIAQ16674 131 aa12.25□□□□□ -0.45
RGP1-201ENST00000378078 C20orf197Q8N268 126 aa12.25□□□□□ -0.45
RGP1-201ENST00000378078 Q8NA96 180 aa12.25□□□□□ -0.45
RGP1-201ENST00000378078 SERP1Q9Y6X1 66 aa12.25□□□□□ -0.45
RGP1-201ENST00000378078 NUP210LQ5VU65 1888 aa12.25□□□□□ -0.45
RGP1-201ENST00000378078 NEXN-AS1Q8NBZ9 246 aa12.25□□□□□ -0.45
RGP1-201ENST00000378078 J3KT08 172 aa12.24□□□□□ -0.45
RGP1-201ENST00000378078 DEFB114Q30KQ6 69 aa12.24□□□□□ -0.45
RGP1-201ENST00000378078 FAM167A-AS1Q96KT0 104 aa12.24□□□□□ -0.45
RGP1-201ENST00000378078 TAX1BP3O14907 124 aa12.24□□□□□ -0.45
RGP1-201ENST00000378078 A0A0J9YXY3 114 aa12.24□□□□□ -0.45
RGP1-201ENST00000378078 SPANXDQ9BXN6 97 aa12.24□□□□□ -0.45
RGP1-201ENST00000378078 KIR2DL5BA0A0G2JN68 375 aa12.23□□□□□ -0.45
RGP1-201ENST00000378078 KIR2DL5BA0A0G2JPC4 375 aa12.23□□□□□ -0.45
RGP1-201ENST00000378078 KIR2DL5AQ8N109 375 aa12.23□□□□□ -0.45
RGP1-201ENST00000378078 IGLV3-1P01715 115 aa12.23□□□□□ -0.45
RGP1-201ENST00000378078 KPRPQ5T749 579 aaPredicted RBP12.23□□□□□ -0.45
RGP1-201ENST00000378078 CEP192Q8TEP8 1941 aa12.23□□□□□ -0.45
RGP1-201ENST00000378078 LINC01545Q5VT33 79 aa12.22□□□□□ -0.45
RGP1-201ENST00000378078 SHISA2Q6UWI4 295 aa12.22□□□□□ -0.45
RGP1-201ENST00000378078 SPINK1P00995 79 aa12.22□□□□□ -0.45
RGP1-201ENST00000378078 IL15RAQ13261 267 aa12.22□□□□□ -0.45
RGP1-201ENST00000378078 IGFL2Q6UWQ7 119 aa12.22□□□□□ -0.45
RGP1-201ENST00000378078 CCKP06307 115 aa12.22□□□□□ -0.45
RGP1-201ENST00000378078 PRR15LQ9BU68 103 aa12.22□□□□□ -0.45
RGP1-201ENST00000378078 TRAV10A0A0B4J240 114 aa12.22□□□□□ -0.45
RGP1-201ENST00000378078 ODF1Q14990 250 aa12.22□□□□□ -0.45
RGP1-201ENST00000378078 MSMPQ1L6U9 139 aa12.22□□□□□ -0.45
RGP1-201ENST00000378078 NUPR2A6NF83 97 aa12.21□□□□□ -0.45
RGP1-201ENST00000378078 TP73-AS1Q9UF72 201 aa12.21□□□□□ -0.45
RGP1-201ENST00000378078 LYRM9A8MSI8 78 aa12.21□□□□□ -0.45
RGP1-201ENST00000378078 EXPH5Q8NEV8 1989 aa12.2□□□□□ -0.46
RGP1-201ENST00000378078 Q6ZSV7 163 aa12.2□□□□□ -0.46
RGP1-201ENST00000378078 C20orf203Q8NBC4 194 aa12.2□□□□□ -0.46
RGP1-201ENST00000378078 CDKN2A-AS1Q9UH64 79 aa12.2□□□□□ -0.46
RGP1-201ENST00000378078 SHANK1Q9Y566 2161 aa12.2□□□□□ -0.46
RGP1-201ENST00000378078 SYCNQ0VAF6 134 aa12.2□□□□□ -0.46
RGP1-201ENST00000378078 MALRD1Q5VYJ5 2156 aa12.19□□□□□ -0.46
RGP1-201ENST00000378078 CFAP126Q5VTH2 177 aa12.19□□□□□ -0.46
RGP1-201ENST00000378078 GVINP1Q7Z2Y8 2422 aa12.19□□□□□ -0.46
RGP1-201ENST00000378078 IGLV2-14P01704 120 aa12.19□□□□□ -0.46
RGP1-201ENST00000378078 BRI3O95415 125 aa12.19□□□□□ -0.46
RGP1-201ENST00000378078 IGLC6P0CF74 106 aa12.18□□□□□ -0.46
RGP1-201ENST00000378078 A6NED7 52 aa12.17□□□□□ -0.46
RGP1-201ENST00000378078 C10orf91Q5T1B1 145 aa12.17□□□□□ -0.46
RGP1-201ENST00000378078 DSCAMO60469 2012 aa12.17□□□□□ -0.46
RGP1-201ENST00000378078 TRBV6-8A0A0A6YYG3 113 aa12.17□□□□□ -0.46
RGP1-201ENST00000378078 C6orf99Q4VX62 202 aa12.17□□□□□ -0.46
RGP1-201ENST00000378078 IGLV5-52A0A0A0MRZ9 124 aa12.16□□□□□ -0.46
RGP1-201ENST00000378078 G3V4G9 280 aa12.16□□□□□ -0.46
RGP1-201ENST00000378078 CTRLP40313 264 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms