RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 RBMY1EA6NEQ0 496 aaKnown RBP13.98□□□□□ -0.17
TMEM53-202ENST00000372237 RBMY1DP0C7P1 496 aaKnown RBP13.98□□□□□ -0.17
TMEM53-202ENST00000372237 SCGB1A1P11684 91 aa13.98□□□□□ -0.17
TMEM53-202ENST00000372237 CEMP1Q6PRD7 247 aaPredicted RBP13.98□□□□□ -0.17
TMEM53-202ENST00000372237 LRRC75A-AS1Q8N1F1 130 aa13.98□□□□□ -0.17
TMEM53-202ENST00000372237 TENM4Q6N022 2769 aa13.97□□□□□ -0.17
TMEM53-202ENST00000372237 A8MTW9 85 aa13.97□□□□□ -0.17
TMEM53-202ENST00000372237 MUSTN1Q8IVN3 82 aa13.97□□□□□ -0.17
TMEM53-202ENST00000372237 TMEM61Q8N0U2 210 aa13.97□□□□□ -0.17
TMEM53-202ENST00000372237 PTH2Q96A98 100 aa13.97□□□□□ -0.17
TMEM53-202ENST00000372237 RAX2Q96IS3 184 aa13.97□□□□□ -0.17
TMEM53-202ENST00000372237 IGHV3-30-3P0DP02 117 aa13.97□□□□□ -0.17
TMEM53-202ENST00000372237 IGHV4-31P0DP07 118 aa13.97□□□□□ -0.17
TMEM53-202ENST00000372237 ZNF415Q09FC8 603 aa13.97□□□□□ -0.17
TMEM53-202ENST00000372237 FAM104AQ969W3 186 aa13.97□□□□□ -0.17
TMEM53-202ENST00000372237 TIMM21Q9BVV7 248 aa13.97□□□□□ -0.17
TMEM53-202ENST00000372237 MRPS36P82909 103 aaKnown RBP13.96□□□□□ -0.17
TMEM53-202ENST00000372237 PEMTQ9UBM1 199 aa13.96□□□□□ -0.17
TMEM53-202ENST00000372237 NACAE9PAV3 2078 aa13.96□□□□□ -0.18
TMEM53-202ENST00000372237 CRYBA4P53673 196 aa13.96□□□□□ -0.18
TMEM53-202ENST00000372237 RNASE13Q5GAN3 156 aaKnown RBP13.96□□□□□ -0.18
TMEM53-202ENST00000372237 A0A0J9YXY3 114 aa13.95□□□□□ -0.18
TMEM53-202ENST00000372237 Q9UF83 564 aa13.95□□□□□ -0.18
TMEM53-202ENST00000372237 KHDC1LQ5JSQ8 128 aa13.95□□□□□ -0.18
TMEM53-202ENST00000372237 TMEM263Q8WUH6 116 aaKnown RBP13.95□□□□□ -0.18
TMEM53-202ENST00000372237 A0A0B4J2C4 111 aa13.94□□□□□ -0.18
TMEM53-202ENST00000372237 EIF4EBP3O60516 100 aaPredicted RBP13.94□□□□□ -0.18
TMEM53-202ENST00000372237 IGHV3-33P01772 117 aa13.94□□□□□ -0.18
TMEM53-202ENST00000372237 TEN1Q86WV5 123 aa13.94□□□□□ -0.18
TMEM53-202ENST00000372237 TRAV8-3A0A0A6YYJ7 113 aa13.93□□□□□ -0.18
TMEM53-202ENST00000372237 PIK3CD-AS1Q5SR53 167 aa13.93□□□□□ -0.18
TMEM53-202ENST00000372237 Q6ZSN1 163 aa13.93□□□□□ -0.18
TMEM53-202ENST00000372237 ERG28Q9UKR5 140 aa13.93□□□□□ -0.18
TMEM53-202ENST00000372237 KMT2BQ9UMN6 2715 aaPredicted RBP13.93□□□□□ -0.18
TMEM53-202ENST00000372237 ADARB2-AS1A8MUL3 147 aa13.93□□□□□ -0.18
TMEM53-202ENST00000372237 H7C2G1 150 aa13.93□□□□□ -0.18
TMEM53-202ENST00000372237 DYNLRB2Q8TF09 96 aa13.93□□□□□ -0.18
TMEM53-202ENST00000372237 LINC01587Q99440 93 aa13.93□□□□□ -0.18
TMEM53-202ENST00000372237 MAP6D1Q9H9H5 199 aa13.93□□□□□ -0.18
TMEM53-202ENST00000372237 CR1P17927 2039 aa13.93□□□□□ -0.18
TMEM53-202ENST00000372237 MXRA5Q9NR99 2828 aa13.93□□□□□ -0.18
TMEM53-202ENST00000372237 TEX15Q9BXT5 2789 aa13.93□□□□□ -0.18
TMEM53-202ENST00000372237 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.92□□□□□ -0.18
TMEM53-202ENST00000372237 KRTAP1-3Q8IUG1 177 aa13.92□□□□□ -0.18
TMEM53-202ENST00000372237 Q96MF0 132 aa13.92□□□□□ -0.18
TMEM53-202ENST00000372237 PPDPFLQ8WWR9 84 aa13.92□□□□□ -0.18
TMEM53-202ENST00000372237 CHCHD7Q9BUK0 85 aa13.92□□□□□ -0.18
TMEM53-202ENST00000372237 ZNF469Q96JG9 3925 aaPredicted RBP13.92□□□□□ -0.18
TMEM53-202ENST00000372237 PRRC2AP48634 2157 aaKnown RBP13.91□□□□□ -0.18
TMEM53-202ENST00000372237 SBSPONQ8IVN8 264 aa13.91□□□□□ -0.18
TMEM53-202ENST00000372237 C4orf3Q8WVX3 66 aa13.91□□□□□ -0.18
TMEM53-202ENST00000372237 SPANXA1Q9NS26 97 aa13.91□□□□□ -0.18
TMEM53-202ENST00000372237 UBE2D4Q9Y2X8 147 aa13.91□□□□□ -0.18
TMEM53-202ENST00000372237 IGHV1-58A0A0C4DH39 117 aa13.91□□□□□ -0.18
TMEM53-202ENST00000372237 Q8N2B8 174 aa13.91□□□□□ -0.18
TMEM53-202ENST00000372237 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.9□□□□□ -0.18
TMEM53-202ENST00000372237 IGKV2-29A2NJV5 120 aaPredicted RBP13.9□□□□□ -0.18
TMEM53-202ENST00000372237 Q1RN00 199 aa13.9□□□□□ -0.18
TMEM53-202ENST00000372237 C11orf72Q8NBR9 251 aa13.9□□□□□ -0.18
TMEM53-202ENST00000372237 CARD19Q96LW7 228 aa13.9□□□□□ -0.18
TMEM53-202ENST00000372237 TINCRA0A1B0GVN0 87 aa13.89□□□□□ -0.19
TMEM53-202ENST00000372237 HELZ2Q9BYK8 2649 aaKnown RBP13.89□□□□□ -0.19
TMEM53-202ENST00000372237 IGHV3-38A0A0C4DH36 116 aa13.89□□□□□ -0.19
TMEM53-202ENST00000372237 PRSS2P07478 247 aa13.89□□□□□ -0.19
TMEM53-202ENST00000372237 HIST2H2BCQ6DN03 193 aa13.89□□□□□ -0.19
TMEM53-202ENST00000372237 LITAFQ99732 161 aa13.89□□□□□ -0.19
TMEM53-202ENST00000372237 NDUFA12Q9UI09 145 aa13.89□□□□□ -0.19
TMEM53-202ENST00000372237 INSP01308 110 aa13.88□□□□□ -0.19
TMEM53-202ENST00000372237 IGHV3-53P01767 116 aa13.88□□□□□ -0.19
TMEM53-202ENST00000372237 PLA2G2AP14555 144 aa13.88□□□□□ -0.19
TMEM53-202ENST00000372237 CDIP1Q9H305 208 aa13.88□□□□□ -0.19
TMEM53-202ENST00000372237 CCDC168Q8NDH2 2452 aa13.88□□□□□ -0.19
TMEM53-202ENST00000372237 SLC25A20O43772 301 aa13.87□□□□□ -0.19
TMEM53-202ENST00000372237 ANKRD29Q8N6D5 301 aa13.87□□□□□ -0.19
TMEM53-202ENST00000372237 VSIG2Q96IQ7 327 aa13.87□□□□□ -0.19
TMEM53-202ENST00000372237 DNAJC30Q96LL9 226 aa13.87□□□□□ -0.19
TMEM53-202ENST00000372237 LINC00467Q9BRT7 94 aa13.87□□□□□ -0.19
TMEM53-202ENST00000372237 TLN2Q9Y4G6 2542 aa13.87□□□□□ -0.19
TMEM53-202ENST00000372237 C9JAW5 83 aa13.87□□□□□ -0.19
TMEM53-202ENST00000372237 SPINK8P0C7L1 97 aa13.87□□□□□ -0.19
TMEM53-202ENST00000372237 DEFB114Q30KQ6 69 aa13.87□□□□□ -0.19
TMEM53-202ENST00000372237 HIST2H2BDQ6DRA6 164 aa13.87□□□□□ -0.19
TMEM53-202ENST00000372237 Q6ZUT4 128 aa13.87□□□□□ -0.19
TMEM53-202ENST00000372237 A8MZ25 164 aa13.86□□□□□ -0.19
TMEM53-202ENST00000372237 FHL3Q13643 280 aa13.86□□□□□ -0.19
TMEM53-202ENST00000372237 GEMIN7Q9H840 131 aaKnown RBP13.86□□□□□ -0.19
TMEM53-202ENST00000372237 BEAN1Q3B7T3 259 aa13.85□□□□□ -0.19
TMEM53-202ENST00000372237 J3QKU1 62 aa13.85□□□□□ -0.19
TMEM53-202ENST00000372237 ADAMTSL4-AS1Q5T5F5 129 aa13.85□□□□□ -0.19
TMEM53-202ENST00000372237 ITPR3Q14573 2671 aa13.85□□□□□ -0.19
TMEM53-202ENST00000372237 SPANXDQ9BXN6 97 aa13.84□□□□□ -0.19
TMEM53-202ENST00000372237 SPANXCQ9NY87 97 aa13.84□□□□□ -0.19
TMEM53-202ENST00000372237 RS1O15537 224 aa13.84□□□□□ -0.19
TMEM53-202ENST00000372237 XCL2Q9UBD3 114 aa13.84□□□□□ -0.19
TMEM53-202ENST00000372237 ATXN8Q156A1 80 aa13.82□□□□□ -0.2
TMEM53-202ENST00000372237 WFDC11Q8NEX6 87 aa13.82□□□□□ -0.2
TMEM53-202ENST00000372237 MIAQ16674 131 aa13.82□□□□□ -0.2
TMEM53-202ENST00000372237 IGHV3OR16-12A0A075B7B8 117 aa13.81□□□□□ -0.2
TMEM53-202ENST00000372237 TRBV30A0A0K0K1B3 111 aa13.81□□□□□ -0.2
TMEM53-202ENST00000372237 NPC2P61916 151 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms