RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 PSORS1C2Q9UIG4 136 aa4.26□□□□□ -1.73
H3F3A-201ENST00000366813 MUC21A0A0G2JKD1 596 aa4.25□□□□□ -1.73
H3F3A-201ENST00000366813 H3BQ15 152 aa4.25□□□□□ -1.73
H3F3A-201ENST00000366813 M0R036 132 aa4.25□□□□□ -1.73
H3F3A-201ENST00000366813 PFN1P07737 140 aaKnown RBP4.25□□□□□ -1.73
H3F3A-201ENST00000366813 S100A2P29034 98 aa4.25□□□□□ -1.73
H3F3A-201ENST00000366813 RAB4BP61018 213 aa4.25□□□□□ -1.73
H3F3A-201ENST00000366813 PKIAP61925 76 aa4.25□□□□□ -1.73
H3F3A-201ENST00000366813 NMSQ5H8A3 153 aa4.25□□□□□ -1.73
H3F3A-201ENST00000366813 HIST3H2BBQ8N257 126 aa4.25□□□□□ -1.73
H3F3A-201ENST00000366813 ZNF664Q8N3J9 261 aa4.25□□□□□ -1.73
H3F3A-201ENST00000366813 SPACA4Q8TDM5 124 aa4.25□□□□□ -1.73
H3F3A-201ENST00000366813 ISOC2Q96AB3 205 aa4.25□□□□□ -1.73
H3F3A-201ENST00000366813 UBE2WQ96B02 151 aa4.25□□□□□ -1.73
H3F3A-201ENST00000366813 TVP23CQ96ET8 276 aa4.25□□□□□ -1.73
H3F3A-201ENST00000366813 RNF185Q96GF1 192 aa4.25□□□□□ -1.73
H3F3A-201ENST00000366813 C2orf88Q9BSF0 95 aa4.25□□□□□ -1.73
H3F3A-201ENST00000366813 PSMG3Q9BT73 122 aaPredicted RBP4.25□□□□□ -1.73
H3F3A-201ENST00000366813 EIF5A2Q9GZV4 153 aaKnown RBP4.25□□□□□ -1.73
H3F3A-201ENST00000366813 A0A0G2JRQ6 117 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 AGPAT2O15120 278 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 HIST1H2BKO60814 126 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 HIST1H2BJP06899 126 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 ORM2P19652 201 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 HIST1H2BOP23527 126 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 ATP6V0CP27449 155 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 HIST1H2BBP33778 126 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 TAGLN2P37802 199 aaKnown RBP4.24□□□□□ -1.73
H3F3A-201ENST00000366813 LEPP41159 167 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 HIST1H2BDP58876 126 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 TAS2R30P59541 319 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 HIST1H2BCP62807 126 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 CACNG7P62955 275 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 JOSD1Q15040 202 aaPredicted RBP4.24□□□□□ -1.73
H3F3A-201ENST00000366813 HIST2H2BEQ16778 126 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.24□□□□□ -1.73
H3F3A-201ENST00000366813 Q6ZQT7 251 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 LYZL2Q7Z4W2 148 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 MRPL52Q86TS9 123 aaKnown RBP4.24□□□□□ -1.73
H3F3A-201ENST00000366813 TMEM252Q8N6L7 170 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 HIST1H2BHQ93079 126 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 C14orf144Q96I85 54 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 GPR82Q96P67 336 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 HIST1H2BNQ99877 126 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 HIST1H2BMQ99879 126 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 ACTR3CQ9C0K3 210 aaPredicted RBP4.24□□□□□ -1.73
H3F3A-201ENST00000366813 KLK12Q9UKR0 248 aa4.24□□□□□ -1.73
H3F3A-201ENST00000366813 LSM5Q9Y4Y9 91 aaKnown RBP4.24□□□□□ -1.73
H3F3A-201ENST00000366813 SSPOA2VEC9 5147 aa4.23□□□□□ -1.73
H3F3A-201ENST00000366813 IGSF23A1L1A6 192 aa4.23□□□□□ -1.73
H3F3A-201ENST00000366813 C7orf71A4D174 169 aa4.23□□□□□ -1.73
H3F3A-201ENST00000366813 PPP1R2P9O14990 202 aa4.23□□□□□ -1.73
H3F3A-201ENST00000366813 RPS10P46783 165 aaKnown RBP4.23□□□□□ -1.73
H3F3A-201ENST00000366813 SPCS3P61009 180 aa4.23□□□□□ -1.73
H3F3A-201ENST00000366813 RPL19P84098 196 aaKnown RBP4.23□□□□□ -1.73
H3F3A-201ENST00000366813 SERF2P84101 59 aa4.23□□□□□ -1.73
H3F3A-201ENST00000366813 SELENOHQ8IZQ5 122 aaKnown RBP4.23□□□□□ -1.73
H3F3A-201ENST00000366813 OR2G3Q8NGZ4 309 aa4.23□□□□□ -1.73
H3F3A-201ENST00000366813 LINC00477Q96M19 166 aa4.23□□□□□ -1.73
H3F3A-201ENST00000366813 PFDN5Q99471 154 aa4.23□□□□□ -1.73
H3F3A-201ENST00000366813 ATP5SQ99766 215 aa4.23□□□□□ -1.73
H3F3A-201ENST00000366813 GTSF1LQ9H1H1 148 aa4.23□□□□□ -1.73
H3F3A-201ENST00000366813 SH3BGRL3Q9H299 93 aa4.23□□□□□ -1.73
H3F3A-201ENST00000366813 ANAPC11Q9NYG5 84 aa4.23□□□□□ -1.73
H3F3A-201ENST00000366813 TIMM9Q9Y5J7 89 aa4.23□□□□□ -1.73
H3F3A-201ENST00000366813 C3orf85A0A1B0GTC6 90 aa4.22□□□□□ -1.73
H3F3A-201ENST00000366813 TSTD3H0UI37 97 aa4.22□□□□□ -1.73
H3F3A-201ENST00000366813 TMEM250H0YL14 139 aa4.22□□□□□ -1.73
H3F3A-201ENST00000366813 MPDU1O75352 247 aa4.22□□□□□ -1.73
H3F3A-201ENST00000366813 GCGP01275 180 aa4.22□□□□□ -1.73
H3F3A-201ENST00000366813 TYMSP04818 313 aa4.22□□□□□ -1.73
H3F3A-201ENST00000366813 SLC25A5P05141 298 aaKnown RBP4.22□□□□□ -1.73
H3F3A-201ENST00000366813 CXCL1P09341 107 aa4.22□□□□□ -1.73
H3F3A-201ENST00000366813 BCL2P10415 239 aa4.22□□□□□ -1.73
H3F3A-201ENST00000366813 DDTP30046 118 aa4.22□□□□□ -1.73
H3F3A-201ENST00000366813 RNASE4P34096 147 aaKnown RBP4.22□□□□□ -1.73
H3F3A-201ENST00000366813 AKR1C3P42330 323 aa4.22□□□□□ -1.73
H3F3A-201ENST00000366813 CCL20P78556 96 aa4.22□□□□□ -1.73
H3F3A-201ENST00000366813 TMEM183AQ8IXX5 376 aa4.22□□□□□ -1.73
H3F3A-201ENST00000366813 RNASE11Q8TAA1 199 aaKnown RBP4.22□□□□□ -1.73
H3F3A-201ENST00000366813 Q8TAT8 98 aa4.22□□□□□ -1.73
H3F3A-201ENST00000366813 FAM213BQ8TBF2 198 aa4.22□□□□□ -1.73
H3F3A-201ENST00000366813 BTF3L4Q96K17 158 aa4.22□□□□□ -1.73
H3F3A-201ENST00000366813 SMIM3Q9BZL3 60 aa4.22□□□□□ -1.73
H3F3A-201ENST00000366813 MACF1Q9UPN3 7388 aaKnown RBP4.22□□□□□ -1.73
H3F3A-201ENST00000366813 FAM24AA6NFZ4 105 aa4.21□□□□□ -1.73
H3F3A-201ENST00000366813 CEBPZOSA8MTT3 80 aa4.21□□□□□ -1.73
H3F3A-201ENST00000366813 OR10J4P0C629 311 aa4.21□□□□□ -1.73
H3F3A-201ENST00000366813 TRGC1P0CF51 173 aa4.21□□□□□ -1.73
H3F3A-201ENST00000366813 FGF7P21781 194 aa4.21□□□□□ -1.73
H3F3A-201ENST00000366813 NDUFA6P56556 154 aa4.21□□□□□ -1.73
H3F3A-201ENST00000366813 AKR1C8PQ5T2L2 129 aa4.21□□□□□ -1.73
H3F3A-201ENST00000366813 CYP2G1PQ6ZSU1 146 aa4.21□□□□□ -1.73
H3F3A-201ENST00000366813 STX12Q86Y82 276 aa4.21□□□□□ -1.73
H3F3A-201ENST00000366813 MTURNQ8N3F0 131 aa4.21□□□□□ -1.73
H3F3A-201ENST00000366813 CYB561D1Q8N8Q1 229 aa4.21□□□□□ -1.73
H3F3A-201ENST00000366813 OR4C5Q8NGB2 326 aa4.21□□□□□ -1.73
H3F3A-201ENST00000366813 OR10D4PQ8NGN7 298 aa4.21□□□□□ -1.73
H3F3A-201ENST00000366813 OR5C1Q8NGR4 320 aa4.21□□□□□ -1.73
H3F3A-201ENST00000366813 TP53RKQ96S44 253 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms