RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 B9D2Q9BPU9 175 aa7.71□□□□□ -1.18
TRAPPC4-201ENST00000359005 PMCHL2Q9BQD1 86 aa7.71□□□□□ -1.18
TRAPPC4-201ENST00000359005 UQCR10Q9UDW1 63 aa7.71□□□□□ -1.18
TRAPPC4-201ENST00000359005 TP53TG1Q9Y2A0 90 aa7.71□□□□□ -1.18
TRAPPC4-201ENST00000359005 DPM2O94777 84 aa7.7□□□□□ -1.18
TRAPPC4-201ENST00000359005 IGHV4-30-4P0DP06 118 aa7.7□□□□□ -1.18
TRAPPC4-201ENST00000359005 DDTP30046 118 aa7.7□□□□□ -1.18
TRAPPC4-201ENST00000359005 CRYBA4P53673 196 aa7.7□□□□□ -1.18
TRAPPC4-201ENST00000359005 LINC00173Q6ZV60 143 aa7.7□□□□□ -1.18
TRAPPC4-201ENST00000359005 OR11H2Q8NH07 326 aa7.7□□□□□ -1.18
TRAPPC4-201ENST00000359005 MIEN1Q9BRT3 115 aa7.7□□□□□ -1.18
TRAPPC4-201ENST00000359005 ZMAT4Q9H898 229 aa7.7□□□□□ -1.18
TRAPPC4-201ENST00000359005 A0A087WX48 190 aa7.69□□□□□ -1.18
TRAPPC4-201ENST00000359005 IGKCP01834 107 aa7.69□□□□□ -1.18
TRAPPC4-201ENST00000359005 PRM2P04554 102 aa7.69□□□□□ -1.18
TRAPPC4-201ENST00000359005 MRPL52Q86TS9 123 aaKnown RBP7.69□□□□□ -1.18
TRAPPC4-201ENST00000359005 NEXN-AS1Q8NBZ9 246 aa7.69□□□□□ -1.18
TRAPPC4-201ENST00000359005 RNF183Q96D59 192 aa7.69□□□□□ -1.18
TRAPPC4-201ENST00000359005 F8VRH5 84 aa7.68□□□□□ -1.18
TRAPPC4-201ENST00000359005 TSHBP01222 138 aa7.68□□□□□ -1.18
TRAPPC4-201ENST00000359005 SPART-AS1P0CW21 52 aa7.68□□□□□ -1.18
TRAPPC4-201ENST00000359005 EMP1P54849 157 aa7.68□□□□□ -1.18
TRAPPC4-201ENST00000359005 PMVKQ15126 192 aa7.68□□□□□ -1.18
TRAPPC4-201ENST00000359005 DEFB135Q30KP9 77 aa7.68□□□□□ -1.18
TRAPPC4-201ENST00000359005 CDPF1Q6NVV7 123 aa7.68□□□□□ -1.18
TRAPPC4-201ENST00000359005 C20orf203Q8NBC4 194 aa7.68□□□□□ -1.18
TRAPPC4-201ENST00000359005 ZNF479Q96JC4 524 aa7.68□□□□□ -1.18
TRAPPC4-201ENST00000359005 PRO1933Q9H354 126 aa7.68□□□□□ -1.18
TRAPPC4-201ENST00000359005 SPANXA1Q9NS26 97 aa7.68□□□□□ -1.18
TRAPPC4-201ENST00000359005 CHTOPQ9Y3Y2 248 aaKnown RBP7.68□□□□□ -1.18
TRAPPC4-201ENST00000359005 PYGO1Q9Y3Y4 419 aa7.68□□□□□ -1.18
TRAPPC4-201ENST00000359005 X6R8D5 127 aa7.68□□□□□ -1.18
TRAPPC4-201ENST00000359005 DNAH1Q9P2D7 4330 aa7.68□□□□□ -1.18
TRAPPC4-201ENST00000359005 PLAC8L1A1L4L8 177 aa7.67□□□□□ -1.18
TRAPPC4-201ENST00000359005 ODF1Q14990 250 aa7.67□□□□□ -1.18
TRAPPC4-201ENST00000359005 ATOH7Q8N100 152 aa7.67□□□□□ -1.18
TRAPPC4-201ENST00000359005 LINC00612Q8N6U2 182 aa7.67□□□□□ -1.18
TRAPPC4-201ENST00000359005 ZNRF2Q8NHG8 242 aa7.67□□□□□ -1.18
TRAPPC4-201ENST00000359005 GTSF1LQ9H1H1 148 aa7.67□□□□□ -1.18
TRAPPC4-201ENST00000359005 H7C423 109 aa7.66□□□□□ -1.18
TRAPPC4-201ENST00000359005 DEFB130BP0DP73 79 aa7.66□□□□□ -1.18
TRAPPC4-201ENST00000359005 DEFB130AP0DP74 79 aa7.66□□□□□ -1.18
TRAPPC4-201ENST00000359005 HERVK_113P61574 105 aa7.66□□□□□ -1.18
TRAPPC4-201ENST00000359005 DAD1P61803 113 aa7.66□□□□□ -1.18
TRAPPC4-201ENST00000359005 DGAT2L7PQ6IED9 249 aa7.66□□□□□ -1.18
TRAPPC4-201ENST00000359005 SLC25A34Q6PIV7 304 aa7.66□□□□□ -1.18
TRAPPC4-201ENST00000359005 SLC25A29Q8N8R3 303 aa7.66□□□□□ -1.18
TRAPPC4-201ENST00000359005 C2orf88Q9BSF0 95 aa7.66□□□□□ -1.18
TRAPPC4-201ENST00000359005 TIMM21Q9BVV7 248 aa7.66□□□□□ -1.18
TRAPPC4-201ENST00000359005 VCX2Q9H322 139 aa7.66□□□□□ -1.18
TRAPPC4-201ENST00000359005 HHLA3Q9XRX5 114 aa7.66□□□□□ -1.18
TRAPPC4-201ENST00000359005 RYR2Q92736 4967 aa7.66□□□□□ -1.18
TRAPPC4-201ENST00000359005 IGIPA6NJ69 53 aa7.65□□□□□ -1.18
TRAPPC4-201ENST00000359005 UBE2L6O14933 153 aa7.65□□□□□ -1.18
TRAPPC4-201ENST00000359005 ATP5G1P05496 136 aa7.65□□□□□ -1.18
TRAPPC4-201ENST00000359005 IGLC3P0DOY3 106 aa7.65□□□□□ -1.18
TRAPPC4-201ENST00000359005 LBHQ53QV2 105 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC4-201ENST00000359005 NEGR1Q7Z3B1 354 aa7.65□□□□□ -1.18
TRAPPC4-201ENST00000359005 SH2D6Q7Z4S9 175 aa7.65□□□□□ -1.18
TRAPPC4-201ENST00000359005 SBSPONQ8IVN8 264 aa7.65□□□□□ -1.18
TRAPPC4-201ENST00000359005 BAALCQ8WXS3 180 aa7.65□□□□□ -1.18
TRAPPC4-201ENST00000359005 PRO0255Q9UI72 69 aa7.65□□□□□ -1.18
TRAPPC4-201ENST00000359005 STARD9Q9P2P6 4700 aa7.64□□□□□ -1.19
TRAPPC4-201ENST00000359005 TENM2Q9NT68 2774 aa7.64□□□□□ -1.19
TRAPPC4-201ENST00000359005 IGHV4-28A0A0C4DH34 117 aa7.64□□□□□ -1.19
TRAPPC4-201ENST00000359005 HNRNPA3P51991 378 aaKnown RBP7.64□□□□□ -1.19
TRAPPC4-201ENST00000359005 UBE2D3P61077 147 aa7.64□□□□□ -1.19
TRAPPC4-201ENST00000359005 UBE2D2P62837 147 aa7.64□□□□□ -1.19
TRAPPC4-201ENST00000359005 FAM222AQ5U5X8 452 aa7.64□□□□□ -1.19
TRAPPC4-201ENST00000359005 TMEM101Q96IK0 257 aa7.64□□□□□ -1.19
TRAPPC4-201ENST00000359005 TRBV25-1A0A075B6N4 114 aa7.63□□□□□ -1.19
TRAPPC4-201ENST00000359005 P0DMU3 169 aa7.63□□□□□ -1.19
TRAPPC4-201ENST00000359005 FAM231AP0DMU4 169 aa7.63□□□□□ -1.19
TRAPPC4-201ENST00000359005 FAM231CP0DMU5 169 aa7.63□□□□□ -1.19
TRAPPC4-201ENST00000359005 SEC11AP67812 179 aa7.63□□□□□ -1.19
TRAPPC4-201ENST00000359005 FHL2Q14192 279 aa7.63□□□□□ -1.19
TRAPPC4-201ENST00000359005 Q6ZSN1 163 aa7.63□□□□□ -1.19
TRAPPC4-201ENST00000359005 MRPL35Q9NZE8 188 aaKnown RBP7.63□□□□□ -1.19
TRAPPC4-201ENST00000359005 DKK2Q9UBU2 259 aa7.63□□□□□ -1.19
TRAPPC4-201ENST00000359005 hDV102S1A0JD36 115 aa7.62□□□□□ -1.19
TRAPPC4-201ENST00000359005 GAGE12JA6NER3 117 aa7.62□□□□□ -1.19
TRAPPC4-201ENST00000359005 PRSS29PA6NIE9 313 aa7.62□□□□□ -1.19
TRAPPC4-201ENST00000359005 DLEU1O43261 78 aa7.62□□□□□ -1.19
TRAPPC4-201ENST00000359005 ZNF25P17030 456 aaPredicted RBP7.62□□□□□ -1.19
TRAPPC4-201ENST00000359005 RPL39P62891 51 aaKnown RBP7.62□□□□□ -1.19
TRAPPC4-201ENST00000359005 MRPS36P82909 103 aaKnown RBP7.62□□□□□ -1.19
TRAPPC4-201ENST00000359005 GAGE1Q13065 139 aa7.62□□□□□ -1.19
TRAPPC4-201ENST00000359005 GAGE4Q13068 117 aa7.62□□□□□ -1.19
TRAPPC4-201ENST00000359005 GAGE5Q13069 117 aa7.62□□□□□ -1.19
TRAPPC4-201ENST00000359005 GAGE13Q4V321 117 aa7.62□□□□□ -1.19
TRAPPC4-201ENST00000359005 AMMECR1LQ6DCA0 310 aa7.62□□□□□ -1.19
TRAPPC4-201ENST00000359005 WWC2-AS2Q96NR7 200 aa7.62□□□□□ -1.19
TRAPPC4-201ENST00000359005 TMEM243Q9BU79 118 aa7.62□□□□□ -1.19
TRAPPC4-201ENST00000359005 CST9LQ9H4G1 147 aa7.62□□□□□ -1.19
TRAPPC4-201ENST00000359005 MRPS16Q9Y3D3 137 aaKnown RBP7.62□□□□□ -1.19
TRAPPC4-201ENST00000359005 CSDC2Q9Y534 153 aaKnown RBP7.62□□□□□ -1.19
TRAPPC4-201ENST00000359005 PLECQ15149 4684 aaKnown RBP7.62□□□□□ -1.19
TRAPPC4-201ENST00000359005 CSMD3Q7Z407 3707 aa7.61□□□□□ -1.19
TRAPPC4-201ENST00000359005 M0R143 59 aa7.61□□□□□ -1.19
TRAPPC4-201ENST00000359005 SIVA1O15304 175 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms