RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 ODF1Q14990 250 aa4.42□□□□□ -1.7
SRGAP1-201ENST00000355086 ZFAND2AQ8N6M9 145 aa4.41□□□□□ -1.7
SRGAP1-201ENST00000355086 FAM236DA0A1B0GTK5 79 aa4.41□□□□□ -1.7
SRGAP1-201ENST00000355086 FAM236CP0DP71 79 aa4.41□□□□□ -1.7
SRGAP1-201ENST00000355086 HRCT1Q6UXD1 115 aa4.41□□□□□ -1.7
SRGAP1-201ENST00000355086 SPRNQ5BIV9 151 aa4.41□□□□□ -1.7
SRGAP1-201ENST00000355086 HIST2H2BDQ6DRA6 164 aa4.41□□□□□ -1.7
SRGAP1-201ENST00000355086 SPINK6Q6UWN8 80 aa4.41□□□□□ -1.7
SRGAP1-201ENST00000355086 SCXQ7RTU7 201 aa4.41□□□□□ -1.7
SRGAP1-201ENST00000355086 V9GYY9 64 aa4.41□□□□□ -1.7
SRGAP1-201ENST00000355086 NDUFA11Q86Y39 141 aa4.41□□□□□ -1.7
SRGAP1-201ENST00000355086 IGLV3-1P01715 115 aa4.41□□□□□ -1.7
SRGAP1-201ENST00000355086 CTRLP40313 264 aa4.41□□□□□ -1.7
SRGAP1-201ENST00000355086 FAM19A5Q7Z5A7 132 aaPredicted RBP4.41□□□□□ -1.7
SRGAP1-201ENST00000355086 PIK3CD-AS1Q5SR53 167 aa4.41□□□□□ -1.7
SRGAP1-201ENST00000355086 DNAJC9-AS1A6NH13 148 aa4.41□□□□□ -1.7
SRGAP1-201ENST00000355086 TMEM89A2RUT3 159 aa4.41□□□□□ -1.7
SRGAP1-201ENST00000355086 MAP6D1Q9H9H5 199 aa4.41□□□□□ -1.7
SRGAP1-201ENST00000355086 LYRM9A8MSI8 78 aa4.4□□□□□ -1.7
SRGAP1-201ENST00000355086 FAM222AQ5U5X8 452 aa4.4□□□□□ -1.7
SRGAP1-201ENST00000355086 C1orf158Q8N1D5 194 aa4.4□□□□□ -1.7
SRGAP1-201ENST00000355086 TTTY13Q9BZ97 58 aa4.4□□□□□ -1.7
SRGAP1-201ENST00000355086 CDPF1Q6NVV7 123 aa4.4□□□□□ -1.7
SRGAP1-201ENST00000355086 TMEM131Q92545 1883 aa4.4□□□□□ -1.7
SRGAP1-201ENST00000355086 SIPA1L1O43166 1804 aa4.4□□□□□ -1.71
SRGAP1-201ENST00000355086 KIF26AQ9ULI4 1882 aaPredicted RBP4.4□□□□□ -1.71
SRGAP1-201ENST00000355086 A6NED7 52 aa4.4□□□□□ -1.71
SRGAP1-201ENST00000355086 G3V4G9 280 aa4.4□□□□□ -1.71
SRGAP1-201ENST00000355086 CEMP1Q6PRD7 247 aaPredicted RBP4.4□□□□□ -1.71
SRGAP1-201ENST00000355086 CHCHD10Q8WYQ3 142 aaPredicted RBP4.4□□□□□ -1.71
SRGAP1-201ENST00000355086 EML5Q05BV3 1969 aa4.4□□□□□ -1.71
SRGAP1-201ENST00000355086 SLPIP03973 132 aa4.4□□□□□ -1.71
SRGAP1-201ENST00000355086 IGLC6P0CF74 106 aa4.4□□□□□ -1.71
SRGAP1-201ENST00000355086 IGLV2-18A0A075B6J9 118 aa4.4□□□□□ -1.71
SRGAP1-201ENST00000355086 WT1P19544 449 aaPredicted RBP4.4□□□□□ -1.71
SRGAP1-201ENST00000355086 TDRG1Q3Y452 100 aa4.4□□□□□ -1.71
SRGAP1-201ENST00000355086 A0A0J9YX75 114 aa4.4□□□□□ -1.71
SRGAP1-201ENST00000355086 FRMPD3Q5JV73 1810 aa4.4□□□□□ -1.71
SRGAP1-201ENST00000355086 FAM167A-AS1Q96KT0 104 aa4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 PLXNA2O75051 1894 aa4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 IGHV4-30-4P0DP06 118 aa4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 IGHV4-31P0DP07 118 aa4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 ENHOQ6UWT2 76 aa4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 UNQ9165/PRO28630Q6UXU0 137 aa4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 NLRC5Q86WI3 1866 aa4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 MYO9AB2RTY4 2548 aa4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 PTH2Q96A98 100 aa4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 NUPR1O60356 82 aa4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 PATE2Q6UY27 113 aa4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 FN1P02751 2386 aaKnown RBP4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 C3orf84H3BNL1 204 aa4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 ADORA2A-AS1P86434 159 aa4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 DENND4CQ5VZ89 1909 aa4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 PCNX3Q9H6A9 2034 aa4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 ATP5EP2Q5VTU8 51 aa4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 C20orf203Q8NBC4 194 aa4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 ZNF706Q9Y5V0 76 aaPredicted RBP4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 COL4A6Q14031 1691 aa4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 LINC00467Q9BRT7 94 aa4.39□□□□□ -1.71
SRGAP1-201ENST00000355086 Q8N9L7 120 aa4.38□□□□□ -1.71
SRGAP1-201ENST00000355086 ZNF524Q96C55 264 aa4.38□□□□□ -1.71
SRGAP1-201ENST00000355086 TCL1BO95988 128 aa4.38□□□□□ -1.71
SRGAP1-201ENST00000355086 SMIM9A6NGZ8 99 aa4.38□□□□□ -1.71
SRGAP1-201ENST00000355086 UQCRQO14949 82 aa4.38□□□□□ -1.71
SRGAP1-201ENST00000355086 A0A0J9YXY3 114 aa4.38□□□□□ -1.71
SRGAP1-201ENST00000355086 COA6Q5JTJ3 125 aaKnown RBP4.38□□□□□ -1.71
SRGAP1-201ENST00000355086 Q6ZTI0 123 aa4.38□□□□□ -1.71
SRGAP1-201ENST00000355086 IGLV9-49A0A0B4J1Y8 123 aa4.38□□□□□ -1.71
SRGAP1-201ENST00000355086 SPANXB1Q9NS25 103 aaPredicted RBP4.37□□□□□ -1.71
SRGAP1-201ENST00000355086 H7C423 109 aa4.37□□□□□ -1.71
SRGAP1-201ENST00000355086 EXPH5Q8NEV8 1989 aa4.37□□□□□ -1.71
SRGAP1-201ENST00000355086 CCKP06307 115 aa4.37□□□□□ -1.71
SRGAP1-201ENST00000355086 NDUFV3P56181 108 aaKnown RBP4.37□□□□□ -1.71
SRGAP1-201ENST00000355086 PPDPFQ9H3Y8 114 aa4.37□□□□□ -1.71
SRGAP1-201ENST00000355086 NDUFC1O43677 76 aa4.37□□□□□ -1.71
SRGAP1-201ENST00000355086 A6NDX4 124 aa4.37□□□□□ -1.71
SRGAP1-201ENST00000355086 DAZAP2Q15038 168 aaPredicted RBP4.37□□□□□ -1.71
SRGAP1-201ENST00000355086 IGFL2Q6UWQ7 119 aa4.37□□□□□ -1.71
SRGAP1-201ENST00000355086 M0R2N4 97 aa4.37□□□□□ -1.71
SRGAP1-201ENST00000355086 TLN2Q9Y4G6 2542 aa4.37□□□□□ -1.71
SRGAP1-201ENST00000355086 ATP5EP56381 51 aaPredicted RBP4.37□□□□□ -1.71
SRGAP1-201ENST00000355086 XAGE1AQ9HD64 81 aa4.37□□□□□ -1.71
SRGAP1-201ENST00000355086 TP53TG3Q9ULZ0 132 aa4.37□□□□□ -1.71
SRGAP1-201ENST00000355086 IGKV2-28A0A075B6P5 120 aa4.37□□□□□ -1.71
SRGAP1-201ENST00000355086 IGKV2D-28P01615 120 aa4.37□□□□□ -1.71
SRGAP1-201ENST00000355086 ODF3L1Q8IXM7 274 aa4.37□□□□□ -1.71
SRGAP1-201ENST00000355086 Q8N7P7 452 aa4.37□□□□□ -1.71
SRGAP1-201ENST00000355086 UBE2D2P62837 147 aa4.37□□□□□ -1.71
SRGAP1-201ENST00000355086 LY6G6CO95867 125 aa4.36□□□□□ -1.71
SRGAP1-201ENST00000355086 LINC00322Q6ZN03 302 aaPredicted RBP4.36□□□□□ -1.71
SRGAP1-201ENST00000355086 DCANP1Q8TF63 244 aa4.36□□□□□ -1.71
SRGAP1-201ENST00000355086 Q6ZVQ6 151 aa4.36□□□□□ -1.71
SRGAP1-201ENST00000355086 INAFM1C9JVW0 142 aa4.36□□□□□ -1.71
SRGAP1-201ENST00000355086 SNURFQ9Y675 71 aa4.36□□□□□ -1.71
SRGAP1-201ENST00000355086 LINC01548A6NM66 108 aa4.36□□□□□ -1.71
SRGAP1-201ENST00000355086 SYCNQ0VAF6 134 aa4.36□□□□□ -1.71
SRGAP1-201ENST00000355086 ZFAND3Q9H8U3 227 aa4.36□□□□□ -1.71
SRGAP1-201ENST00000355086 IBA57-AS1B1ANH7 110 aa4.36□□□□□ -1.71
SRGAP1-201ENST00000355086 MIFP14174 115 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms