RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 RBX1P62877 108 aa10.05□□□□□ -0.8
DDX55-202ENST00000354291 SUMO4Q6EEV6 95 aa10.05□□□□□ -0.8
DDX55-202ENST00000354291 WDR73Q6P4I2 378 aa10.05□□□□□ -0.8
DDX55-202ENST00000354291 C9orf62Q8N4C0 152 aa10.05□□□□□ -0.8
DDX55-202ENST00000354291 PRR34Q9NV39 138 aa10.05□□□□□ -0.8
DDX55-202ENST00000354291 A0A0J9YXV3 536 aa10.04□□□□□ -0.8
DDX55-202ENST00000354291 GAGE6Q13070 117 aa10.04□□□□□ -0.8
DDX55-202ENST00000354291 RASL11AQ6T310 242 aa10.04□□□□□ -0.8
DDX55-202ENST00000354291 NUDT10Q8NFP7 164 aa10.04□□□□□ -0.8
DDX55-202ENST00000354291 NUDT11Q96G61 164 aa10.04□□□□□ -0.8
DDX55-202ENST00000354291 A0A087WYN8 130 aa10.03□□□□□ -0.8
DDX55-202ENST00000354291 PHOX2AO14813 284 aa10.03□□□□□ -0.8
DDX55-202ENST00000354291 NKX2-5P52952 324 aaPredicted RBP10.03□□□□□ -0.8
DDX55-202ENST00000354291 KRTAP10-8P60410 259 aa10.03□□□□□ -0.8
DDX55-202ENST00000354291 LINC00269Q8N2A0 174 aa10.03□□□□□ -0.8
DDX55-202ENST00000354291 NIT2Q9NQR4 276 aa10.03□□□□□ -0.8
DDX55-202ENST00000354291 A0A1B0GUV1 79 aa10.01□□□□□ -0.81
DDX55-202ENST00000354291 CTRLP40313 264 aa10.01□□□□□ -0.81
DDX55-202ENST00000354291 TWIST1Q15672 202 aa10.01□□□□□ -0.81
DDX55-202ENST00000354291 Q6ZNX1 250 aa10.01□□□□□ -0.81
DDX55-202ENST00000354291 OCC1Q8TAD7 63 aa10.01□□□□□ -0.81
DDX55-202ENST00000354291 C7orf33Q8WU49 177 aa10.01□□□□□ -0.81
DDX55-202ENST00000354291 PGLYRP4Q96LB8 373 aa10.01□□□□□ -0.81
DDX55-202ENST00000354291 TMEM243Q9BU79 118 aa10.01□□□□□ -0.81
DDX55-202ENST00000354291 CNFNQ9BYD5 112 aa10.01□□□□□ -0.81
DDX55-202ENST00000354291 RPP21Q9H633 154 aaKnown RBP10.01□□□□□ -0.81
DDX55-202ENST00000354291 FAT4Q6V0I7 4981 aa10□□□□□ -0.81
DDX55-202ENST00000354291 CHTF8P0CG12 524 aa10□□□□□ -0.81
DDX55-202ENST00000354291 BLOC1S1P78537 153 aa10□□□□□ -0.81
DDX55-202ENST00000354291 REG3AQ06141 175 aa10□□□□□ -0.81
DDX55-202ENST00000354291 CIRBPQ14011 172 aaKnown RBP10□□□□□ -0.81
DDX55-202ENST00000354291 CLPSL2Q6UWE3 100 aa10□□□□□ -0.81
DDX55-202ENST00000354291 TRAV8-4A0A0B4J246 113 aa9.99□□□□□ -0.81
DDX55-202ENST00000354291 TMEM250H0YL14 139 aa9.99□□□□□ -0.81
DDX55-202ENST00000354291 AKAP14Q86UN6 197 aa9.99□□□□□ -0.81
DDX55-202ENST00000354291 CLRN3Q8NCR9 226 aa9.99□□□□□ -0.81
DDX55-202ENST00000354291 GTSF1Q8WW33 167 aa9.99□□□□□ -0.81
DDX55-202ENST00000354291 RNASE7Q9H1E1 156 aaKnown RBP9.99□□□□□ -0.81
DDX55-202ENST00000354291 K7EN84 100 aa9.98□□□□□ -0.81
DDX55-202ENST00000354291 UBE2L6O14933 153 aa9.98□□□□□ -0.81
DDX55-202ENST00000354291 COTL1Q14019 142 aa9.98□□□□□ -0.81
DDX55-202ENST00000354291 KRTAP26-1Q6PEX3 210 aa9.98□□□□□ -0.81
DDX55-202ENST00000354291 SMIM15Q7Z3B0 74 aa9.98□□□□□ -0.81
DDX55-202ENST00000354291 C20orf203Q8NBC4 194 aa9.98□□□□□ -0.81
DDX55-202ENST00000354291 RNF185Q96GF1 192 aa9.98□□□□□ -0.81
DDX55-202ENST00000354291 ALKAL2Q6UX46 152 aa9.97□□□□□ -0.81
DDX55-202ENST00000354291 IGLV4-60A0A075B6I1 120 aa9.96□□□□□ -0.82
DDX55-202ENST00000354291 IGLV10-54A0A075B6I4 117 aa9.96□□□□□ -0.82
DDX55-202ENST00000354291 IGHV3-64A0A075B6Q5 118 aa9.96□□□□□ -0.82
DDX55-202ENST00000354291 AMTP48728 403 aa9.96□□□□□ -0.82
DDX55-202ENST00000354291 REG3GQ6UW15 175 aa9.96□□□□□ -0.82
DDX55-202ENST00000354291 TEX261Q6UWH6 196 aa9.96□□□□□ -0.82
DDX55-202ENST00000354291 LYPD6BQ8NI32 183 aa9.96□□□□□ -0.82
DDX55-202ENST00000354291 A8MWL6 223 aa9.95□□□□□ -0.82
DDX55-202ENST00000354291 GATCO43716 136 aaKnown RBP9.95□□□□□ -0.82
DDX55-202ENST00000354291 FAM231DQ6ZW35 169 aa9.95□□□□□ -0.82
DDX55-202ENST00000354291 GATD1Q8NB37 220 aa9.95□□□□□ -0.82
DDX55-202ENST00000354291 SPACA4Q8TDM5 124 aa9.95□□□□□ -0.82
DDX55-202ENST00000354291 hDV102S1A0JD36 115 aa9.94□□□□□ -0.82
DDX55-202ENST00000354291 PRR3P79522 188 aaKnown RBP9.94□□□□□ -0.82
DDX55-202ENST00000354291 PLAC8Q9NZF1 115 aa9.94□□□□□ -0.82
DDX55-202ENST00000354291 TRAV26-2A0A0B4J265 109 aa9.93□□□□□ -0.82
DDX55-202ENST00000354291 CNBPP62633 177 aaKnown RBP9.93□□□□□ -0.82
DDX55-202ENST00000354291 GFRA4Q9GZZ7 299 aa9.93□□□□□ -0.82
DDX55-202ENST00000354291 hCG_2014768A0A024R1R8 64 aa9.92□□□□□ -0.82
DDX55-202ENST00000354291 NCR2O95944 276 aa9.92□□□□□ -0.82
DDX55-202ENST00000354291 CEBPGP53567 150 aa9.92□□□□□ -0.82
DDX55-202ENST00000354291 FOXA3P55318 350 aaPredicted RBP9.92□□□□□ -0.82
DDX55-202ENST00000354291 CT83Q5H943 113 aa9.92□□□□□ -0.82
DDX55-202ENST00000354291 SPINK6Q6UWN8 80 aa9.92□□□□□ -0.82
DDX55-202ENST00000354291 AP5S1Q9NUS5 200 aa9.92□□□□□ -0.82
DDX55-202ENST00000354291 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.91□□□□□ -0.82
DDX55-202ENST00000354291 A0A0U1RQV1 116 aa9.91□□□□□ -0.82
DDX55-202ENST00000354291 H7C423 109 aa9.91□□□□□ -0.82
DDX55-202ENST00000354291 NDUFS6O75380 124 aaKnown RBP9.91□□□□□ -0.82
DDX55-202ENST00000354291 BORCS7Q96B45 105 aa9.91□□□□□ -0.82
DDX55-202ENST00000354291 EIF5A2Q9GZV4 153 aaKnown RBP9.91□□□□□ -0.82
DDX55-202ENST00000354291 SLPIP03973 132 aa9.9□□□□□ -0.82
DDX55-202ENST00000354291 AMMECR1LQ6DCA0 310 aa9.9□□□□□ -0.82
DDX55-202ENST00000354291 RPL39LQ96EH5 51 aaKnown RBP9.9□□□□□ -0.82
DDX55-202ENST00000354291 SDHAF1A6NFY7 115 aa9.89□□□□□ -0.83
DDX55-202ENST00000354291 APCSP02743 223 aa9.89□□□□□ -0.83
DDX55-202ENST00000354291 MAJINQ3KP22 176 aa9.89□□□□□ -0.83
DDX55-202ENST00000354291 CFAP161Q6P656 301 aa9.89□□□□□ -0.83
DDX55-202ENST00000354291 SMIM7Q9BQ49 75 aa9.89□□□□□ -0.83
DDX55-202ENST00000354291 RNASEKQ6P5S7 137 aaKnown RBP9.88□□□□□ -0.83
DDX55-202ENST00000354291 FAM210AQ96ND0 272 aa9.88□□□□□ -0.83
DDX55-202ENST00000354291 IGKV3OR2-268A0A0C4DH90 116 aa9.87□□□□□ -0.83
DDX55-202ENST00000354291 TRBV6-5A0A0K0K1A5 114 aa9.87□□□□□ -0.83
DDX55-202ENST00000354291 A0A1B0GUT8 65 aa9.87□□□□□ -0.83
DDX55-202ENST00000354291 FAM231BA6NCW3 169 aa9.87□□□□□ -0.83
DDX55-202ENST00000354291 I3L3M4 83 aa9.87□□□□□ -0.83
DDX55-202ENST00000354291 PMCHP20382 165 aa9.87□□□□□ -0.83
DDX55-202ENST00000354291 COX6A2Q02221 97 aa9.87□□□□□ -0.83
DDX55-202ENST00000354291 LINC01551Q86U37 167 aa9.87□□□□□ -0.83
DDX55-202ENST00000354291 TSKUQ8WUA8 353 aa9.87□□□□□ -0.83
DDX55-202ENST00000354291 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.86□□□□□ -0.83
DDX55-202ENST00000354291 IGKV2-24A0A0C4DH68 120 aa9.86□□□□□ -0.83
DDX55-202ENST00000354291 IGKV2-29A2NJV5 120 aaPredicted RBP9.86□□□□□ -0.83
DDX55-202ENST00000354291 GAGE12HA6NDE8 117 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms