RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 RNF152Q8N8N0 203 aa9.12□□□□□ -0.95
TRAF3-201ENST00000347662 LTBP2Q14767 1821 aa9.12□□□□□ -0.95
TRAF3-201ENST00000347662 RPL39P62891 51 aaKnown RBP9.12□□□□□ -0.95
TRAF3-201ENST00000347662 OBSL1O75147 1896 aa9.12□□□□□ -0.95
TRAF3-201ENST00000347662 H3BUA1 57 aa9.12□□□□□ -0.95
TRAF3-201ENST00000347662 POLQO75417 2590 aa9.12□□□□□ -0.95
TRAF3-201ENST00000347662 G3V4G9 280 aa9.11□□□□□ -0.95
TRAF3-201ENST00000347662 IGF2-ASQ6U949 168 aa9.11□□□□□ -0.95
TRAF3-201ENST00000347662 CTSZQ9UBR2 303 aa9.11□□□□□ -0.95
TRAF3-201ENST00000347662 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.11□□□□□ -0.95
TRAF3-201ENST00000347662 Q8N9L7 120 aa9.11□□□□□ -0.95
TRAF3-201ENST00000347662 FXYD5Q96DB9 178 aa9.11□□□□□ -0.95
TRAF3-201ENST00000347662 Q6ZUT4 128 aa9.11□□□□□ -0.95
TRAF3-201ENST00000347662 C20orf144Q9BQM9 153 aa9.11□□□□□ -0.95
TRAF3-201ENST00000347662 HILS1P60008 231 aa9.1□□□□□ -0.95
TRAF3-201ENST00000347662 C1orf158Q8N1D5 194 aa9.1□□□□□ -0.95
TRAF3-201ENST00000347662 LINC00269Q8N2A0 174 aa9.1□□□□□ -0.95
TRAF3-201ENST00000347662 C20orf197Q8N268 126 aa9.1□□□□□ -0.95
TRAF3-201ENST00000347662 C3orf84H3BNL1 204 aa9.1□□□□□ -0.95
TRAF3-201ENST00000347662 BLCAPP62952 87 aa9.1□□□□□ -0.95
TRAF3-201ENST00000347662 SDIM1Q6ZPB5 146 aa9.1□□□□□ -0.95
TRAF3-201ENST00000347662 RETNLBQ9BQ08 111 aa9.1□□□□□ -0.95
TRAF3-201ENST00000347662 MED14OSP0DP75 135 aa9.1□□□□□ -0.95
TRAF3-201ENST00000347662 AGPAT4-IT1Q9H0P7 198 aa9.09□□□□□ -0.95
TRAF3-201ENST00000347662 LOXL1Q08397 574 aaPredicted RBP9.09□□□□□ -0.95
TRAF3-201ENST00000347662 Q8N1Y9 231 aa9.09□□□□□ -0.95
TRAF3-201ENST00000347662 AJUBAQ96IF1 538 aa9.09□□□□□ -0.95
TRAF3-201ENST00000347662 NCOR1P1Q9H4R4 102 aa9.09□□□□□ -0.95
TRAF3-201ENST00000347662 ZFAND3Q9H8U3 227 aa9.09□□□□□ -0.95
TRAF3-201ENST00000347662 WT1-ASQ06250 92 aa9.09□□□□□ -0.95
TRAF3-201ENST00000347662 Q6ZVH6 145 aa9.09□□□□□ -0.95
TRAF3-201ENST00000347662 PDE6GP18545 87 aa9.08□□□□□ -0.96
TRAF3-201ENST00000347662 KIAA1549LQ6ZVL6 1849 aa9.08□□□□□ -0.96
TRAF3-201ENST00000347662 PIK3CD-AS1Q5SR53 167 aa9.08□□□□□ -0.96
TRAF3-201ENST00000347662 Q8NA96 180 aa9.08□□□□□ -0.96
TRAF3-201ENST00000347662 USP9YO00507 2555 aaPredicted RBP9.08□□□□□ -0.96
TRAF3-201ENST00000347662 WFDC13Q8IUB5 93 aa9.08□□□□□ -0.96
TRAF3-201ENST00000347662 ENHOQ6UWT2 76 aa9.07□□□□□ -0.96
TRAF3-201ENST00000347662 DEFB131BA0A096LNP1 70 aa9.07□□□□□ -0.96
TRAF3-201ENST00000347662 IGLC1P0CG04 106 aa9.07□□□□□ -0.96
TRAF3-201ENST00000347662 NDUFV3P56181 108 aaKnown RBP9.07□□□□□ -0.96
TRAF3-201ENST00000347662 Q6ZS49 121 aa9.06□□□□□ -0.96
TRAF3-201ENST00000347662 PRO3102Q9H379 93 aa9.06□□□□□ -0.96
TRAF3-201ENST00000347662 C15orf65H3BRN8 121 aa9.06□□□□□ -0.96
TRAF3-201ENST00000347662 ODF1Q14990 250 aa9.06□□□□□ -0.96
TRAF3-201ENST00000347662 XAGE1AQ9HD64 81 aa9.06□□□□□ -0.96
TRAF3-201ENST00000347662 DCANP1Q8TF63 244 aa9.06□□□□□ -0.96
TRAF3-201ENST00000347662 KAAG1Q9UBP8 84 aa9.06□□□□□ -0.96
TRAF3-201ENST00000347662 HCFC1P51610 2035 aa9.06□□□□□ -0.96
TRAF3-201ENST00000347662 C2orf70A6NJV1 201 aa9.06□□□□□ -0.96
TRAF3-201ENST00000347662 SLPIP03973 132 aa9.05□□□□□ -0.96
TRAF3-201ENST00000347662 C16orf54Q6UWD8 224 aa9.05□□□□□ -0.96
TRAF3-201ENST00000347662 ODF3L1Q8IXM7 274 aa9.05□□□□□ -0.96
TRAF3-201ENST00000347662 C10orf105Q8TEF2 133 aa9.05□□□□□ -0.96
TRAF3-201ENST00000347662 WFDC2Q14508 124 aa9.05□□□□□ -0.96
TRAF3-201ENST00000347662 REG3AQ06141 175 aa9.05□□□□□ -0.96
TRAF3-201ENST00000347662 SNURFQ9Y675 71 aa9.05□□□□□ -0.96
TRAF3-201ENST00000347662 PRO0255Q9UI72 69 aa9.05□□□□□ -0.96
TRAF3-201ENST00000347662 UFSP1Q6NVU6 142 aa9.04□□□□□ -0.96
TRAF3-201ENST00000347662 COL4A4P53420 1690 aaPredicted RBP9.04□□□□□ -0.96
TRAF3-201ENST00000347662 PRORYQ9H606 182 aa9.04□□□□□ -0.96
TRAF3-201ENST00000347662 FAM30AQ9NZY2 134 aa9.04□□□□□ -0.96
TRAF3-201ENST00000347662 IGKV2-28A0A075B6P5 120 aa9.04□□□□□ -0.96
TRAF3-201ENST00000347662 IGKV2D-28P01615 120 aa9.04□□□□□ -0.96
TRAF3-201ENST00000347662 FAM222AQ5U5X8 452 aa9.04□□□□□ -0.96
TRAF3-201ENST00000347662 ZNF706Q9Y5V0 76 aaPredicted RBP9.04□□□□□ -0.96
TRAF3-201ENST00000347662 LINC00311Q8N616 119 aa9.04□□□□□ -0.96
TRAF3-201ENST00000347662 NFE4Q86UQ8 179 aa9.03□□□□□ -0.96
TRAF3-201ENST00000347662 C4orf3Q8WVX3 66 aa9.03□□□□□ -0.96
TRAF3-201ENST00000347662 ZNF747Q9BV97 191 aa9.03□□□□□ -0.96
TRAF3-201ENST00000347662 DNAH12Q6ZR08 3092 aa9.03□□□□□ -0.96
TRAF3-201ENST00000347662 SPINK1P00995 79 aa9.03□□□□□ -0.96
TRAF3-201ENST00000347662 CIRBP-AS1Q8TBR5 109 aa9.03□□□□□ -0.96
TRAF3-201ENST00000347662 MYCNOSP40205 109 aa9.02□□□□□ -0.96
TRAF3-201ENST00000347662 SPANXB1Q9NS25 103 aaPredicted RBP9.02□□□□□ -0.96
TRAF3-201ENST00000347662 IGHV1-58A0A0C4DH39 117 aa9.02□□□□□ -0.96
TRAF3-201ENST00000347662 ZNF843Q8N446 348 aa9.02□□□□□ -0.97
TRAF3-201ENST00000347662 C11orf53Q8IXP5 236 aa9.02□□□□□ -0.97
TRAF3-201ENST00000347662 C1orf147Q96MC9 270 aaPredicted RBP9.02□□□□□ -0.97
TRAF3-201ENST00000347662 C19orf84I3L1E1 186 aa9.01□□□□□ -0.97
TRAF3-201ENST00000347662 K7EN84 100 aa9.01□□□□□ -0.97
TRAF3-201ENST00000347662 LY6LH3BQJ8 138 aa9.01□□□□□ -0.97
TRAF3-201ENST00000347662 SPATA12Q7Z6I5 190 aa9.01□□□□□ -0.97
TRAF3-201ENST00000347662 SPRY4Q9C004 299 aa9.01□□□□□ -0.97
TRAF3-201ENST00000347662 CEMP1Q6PRD7 247 aaPredicted RBP9.01□□□□□ -0.97
TRAF3-201ENST00000347662 LENEPQ9Y5L5 61 aa9.01□□□□□ -0.97
TRAF3-201ENST00000347662 CCKP06307 115 aa9□□□□□ -0.97
TRAF3-201ENST00000347662 TCL1BO95988 128 aa9□□□□□ -0.97
TRAF3-201ENST00000347662 TET2Q6N021 2002 aaPredicted RBP9□□□□□ -0.97
TRAF3-201ENST00000347662 P0DMU3 169 aa9□□□□□ -0.97
TRAF3-201ENST00000347662 FAM231AP0DMU4 169 aa9□□□□□ -0.97
TRAF3-201ENST00000347662 FAM231CP0DMU5 169 aa9□□□□□ -0.97
TRAF3-201ENST00000347662 ZNF726P1Q15940 193 aa9□□□□□ -0.97
TRAF3-201ENST00000347662 CHCHD10Q8WYQ3 142 aaPredicted RBP9□□□□□ -0.97
TRAF3-201ENST00000347662 A6NDX4 124 aa8.99□□□□□ -0.97
TRAF3-201ENST00000347662 MSRB1Q9NZV6 116 aa8.99□□□□□ -0.97
TRAF3-201ENST00000347662 TRBV6-1A0A0K0K1D8 114 aa8.99□□□□□ -0.97
TRAF3-201ENST00000347662 RPL37AP8A6NKH3 93 aa8.99□□□□□ -0.97
TRAF3-201ENST00000347662 ADCYAP1P18509 176 aa8.99□□□□□ -0.97
TRAF3-201ENST00000347662 DAZAP2Q15038 168 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms