RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 LST1O00453 97 aa4.78□□□□□ -1.64
VCAN-203ENST00000343200 UBR5O95071 2799 aaPredicted RBP4.78□□□□□ -1.64
VCAN-203ENST00000343200 SHISA2Q6UWI4 295 aa4.78□□□□□ -1.64
VCAN-203ENST00000343200 THSD7BQ9C0I4 1608 aa4.78□□□□□ -1.64
VCAN-203ENST00000343200 IGKV1-6A0A0C4DH72 117 aa4.77□□□□□ -1.65
VCAN-203ENST00000343200 GATA3P23771 443 aa4.77□□□□□ -1.65
VCAN-203ENST00000343200 DEFB131AP59861 70 aa4.77□□□□□ -1.65
VCAN-203ENST00000343200 NFE4Q86UQ8 179 aa4.77□□□□□ -1.65
VCAN-203ENST00000343200 CELA1Q9UNI1 258 aa4.77□□□□□ -1.65
VCAN-203ENST00000343200 GP9P14770 177 aa4.77□□□□□ -1.65
VCAN-203ENST00000343200 ESM1Q9NQ30 184 aa4.77□□□□□ -1.65
VCAN-203ENST00000343200 H3BUX3 64 aa4.77□□□□□ -1.65
VCAN-203ENST00000343200 H7C423 109 aa4.77□□□□□ -1.65
VCAN-203ENST00000343200 LOXP28300 417 aaPredicted RBP4.77□□□□□ -1.65
VCAN-203ENST00000343200 IGHV3-30P01768 117 aa4.77□□□□□ -1.65
VCAN-203ENST00000343200 IGHV3-30-5P0DP03 117 aa4.77□□□□□ -1.65
VCAN-203ENST00000343200 MED14OSP0DP75 135 aa4.77□□□□□ -1.65
VCAN-203ENST00000343200 GGNQ86UU5 652 aa4.77□□□□□ -1.65
VCAN-203ENST00000343200 SOSTDC1Q6X4U4 206 aa4.77□□□□□ -1.65
VCAN-203ENST00000343200 C5orf24Q7Z6I8 188 aa4.77□□□□□ -1.65
VCAN-203ENST00000343200 Q8TCH9 128 aa4.77□□□□□ -1.65
VCAN-203ENST00000343200 ATP6V0E1O15342 81 aa4.77□□□□□ -1.65
VCAN-203ENST00000343200 SPAG11AQ6PDA7 123 aa4.76□□□□□ -1.65
VCAN-203ENST00000343200 C3orf84H3BNL1 204 aa4.76□□□□□ -1.65
VCAN-203ENST00000343200 IGF1P05019 195 aa4.76□□□□□ -1.65
VCAN-203ENST00000343200 GYPEP15421 78 aa4.76□□□□□ -1.65
VCAN-203ENST00000343200 LMO1P25800 156 aa4.76□□□□□ -1.65
VCAN-203ENST00000343200 Q6ZR03 302 aa4.76□□□□□ -1.65
VCAN-203ENST00000343200 C2orf91Q6ZV80 131 aa4.76□□□□□ -1.65
VCAN-203ENST00000343200 DEFB123Q8N688 67 aa4.76□□□□□ -1.65
VCAN-203ENST00000343200 TRBV7-6A0A0J9YX20 115 aa4.76□□□□□ -1.65
VCAN-203ENST00000343200 EBI3Q14213 229 aa4.76□□□□□ -1.65
VCAN-203ENST00000343200 IGLV10-54A0A075B6I4 117 aa4.76□□□□□ -1.65
VCAN-203ENST00000343200 A0A0J9YXV3 536 aa4.76□□□□□ -1.65
VCAN-203ENST00000343200 PPDPFQ9H3Y8 114 aa4.76□□□□□ -1.65
VCAN-203ENST00000343200 C8orf87E5RJ46 101 aa4.76□□□□□ -1.65
VCAN-203ENST00000343200 GNRH2O43555 120 aa4.76□□□□□ -1.65
VCAN-203ENST00000343200 UNC79Q9P2D8 2635 aa4.76□□□□□ -1.65
VCAN-203ENST00000343200 IGHV3-33P01772 117 aa4.76□□□□□ -1.65
VCAN-203ENST00000343200 FAM27E3Q08E93 113 aa4.76□□□□□ -1.65
VCAN-203ENST00000343200 ESRGQ1W209 222 aa4.76□□□□□ -1.65
VCAN-203ENST00000343200 NEXN-AS1Q8NBZ9 246 aa4.76□□□□□ -1.65
VCAN-203ENST00000343200 APCP25054 2843 aa4.75□□□□□ -1.65
VCAN-203ENST00000343200 IGLV3-9A0A075B6K5 115 aa4.75□□□□□ -1.65
VCAN-203ENST00000343200 Q6ZQT7 251 aa4.75□□□□□ -1.65
VCAN-203ENST00000343200 A0A1B0GXF2 115 aa4.75□□□□□ -1.65
VCAN-203ENST00000343200 UFSP1Q6NVU6 142 aa4.75□□□□□ -1.65
VCAN-203ENST00000343200 H3BUA1 57 aa4.75□□□□□ -1.65
VCAN-203ENST00000343200 PRR20EP86478 221 aa4.75□□□□□ -1.65
VCAN-203ENST00000343200 PRR20CP86479 221 aa4.75□□□□□ -1.65
VCAN-203ENST00000343200 PRR20DP86480 221 aa4.75□□□□□ -1.65
VCAN-203ENST00000343200 PRR20BP86481 221 aa4.75□□□□□ -1.65
VCAN-203ENST00000343200 PRR20AP86496 221 aa4.75□□□□□ -1.65
VCAN-203ENST00000343200 COX17Q14061 63 aa4.75□□□□□ -1.65
VCAN-203ENST00000343200 ZFAND3Q9H8U3 227 aa4.75□□□□□ -1.65
VCAN-203ENST00000343200 TRBV6-1A0A0K0K1D8 114 aa4.75□□□□□ -1.65
VCAN-203ENST00000343200 TMEM254Q8TBM7 123 aa4.75□□□□□ -1.65
VCAN-203ENST00000343200 PLAC8L1A1L4L8 177 aa4.74□□□□□ -1.65
VCAN-203ENST00000343200 B4DSR2 109 aa4.74□□□□□ -1.65
VCAN-203ENST00000343200 LINC00205P59089 165 aa4.74□□□□□ -1.65
VCAN-203ENST00000343200 SAP25Q8TEE9 199 aa4.74□□□□□ -1.65
VCAN-203ENST00000343200 IBA57-AS1B1ANH7 110 aa4.74□□□□□ -1.65
VCAN-203ENST00000343200 C9orf106Q8NAJ2 232 aa4.74□□□□□ -1.65
VCAN-203ENST00000343200 TRBV6-5A0A0K0K1A5 114 aa4.74□□□□□ -1.65
VCAN-203ENST00000343200 IGLV3-12A0A075B6K2 115 aa4.74□□□□□ -1.65
VCAN-203ENST00000343200 UBE2D1P51668 147 aa4.74□□□□□ -1.65
VCAN-203ENST00000343200 SCXQ7RTU7 201 aa4.74□□□□□ -1.65
VCAN-203ENST00000343200 A0A0J9YWU9 116 aa4.74□□□□□ -1.65
VCAN-203ENST00000343200 TGFBR3LH3BV60 316 aa4.74□□□□□ -1.65
VCAN-203ENST00000343200 LINC00311Q8N616 119 aa4.74□□□□□ -1.65
VCAN-203ENST00000343200 TMEM263Q8WUH6 116 aaKnown RBP4.74□□□□□ -1.65
VCAN-203ENST00000343200 SPRR3Q9UBC9 169 aa4.74□□□□□ -1.65
VCAN-203ENST00000343200 RPL28P46779 137 aaKnown RBP4.74□□□□□ -1.65
VCAN-203ENST00000343200 LRCOL1A6NCL2 159 aa4.73□□□□□ -1.65
VCAN-203ENST00000343200 MLANAQ16655 118 aa4.73□□□□□ -1.65
VCAN-203ENST00000343200 C22orf34Q6ZV56 151 aa4.73□□□□□ -1.65
VCAN-203ENST00000343200 LINC00308Q8TCZ7 52 aa4.73□□□□□ -1.65
VCAN-203ENST00000343200 TTTY13Q9BZ97 58 aa4.73□□□□□ -1.65
VCAN-203ENST00000343200 ZNF581Q9P0T4 197 aa4.73□□□□□ -1.65
VCAN-203ENST00000343200 UBE2D3P61077 147 aa4.73□□□□□ -1.65
VCAN-203ENST00000343200 FAM30AQ9NZY2 134 aa4.73□□□□□ -1.65
VCAN-203ENST00000343200 C1orf158Q8N1D5 194 aa4.73□□□□□ -1.65
VCAN-203ENST00000343200 F8WDY8 70 aa4.73□□□□□ -1.65
VCAN-203ENST00000343200 RPP25Q9BUL9 199 aaKnown RBP4.73□□□□□ -1.65
VCAN-203ENST00000343200 DHRS4-AS1Q9P1J3 65 aa4.73□□□□□ -1.65
VCAN-203ENST00000343200 IGKV1OR2-108A0A075B7D4 117 aa4.73□□□□□ -1.65
VCAN-203ENST00000343200 C5orf67F2Z3F1 127 aa4.73□□□□□ -1.65
VCAN-203ENST00000343200 SETXQ7Z333 2677 aaKnown RBP4.73□□□□□ -1.65
VCAN-203ENST00000343200 WT1P19544 449 aaPredicted RBP4.73□□□□□ -1.65
VCAN-203ENST00000343200 ZNF672Q499Z4 452 aaPredicted RBP4.73□□□□□ -1.65
VCAN-203ENST00000343200 U3KQK5 164 aa4.73□□□□□ -1.65
VCAN-203ENST00000343200 A0A0J9YY99 117 aa4.72□□□□□ -1.65
VCAN-203ENST00000343200 LINC01356Q8N9X3 169 aa4.72□□□□□ -1.65
VCAN-203ENST00000343200 C1orf53Q5VUE5 145 aa4.72□□□□□ -1.65
VCAN-203ENST00000343200 C14orf177Q52M58 125 aa4.72□□□□□ -1.65
VCAN-203ENST00000343200 FAM167A-AS1Q96KT0 104 aa4.72□□□□□ -1.65
VCAN-203ENST00000343200 C15orf65H3BRN8 121 aa4.72□□□□□ -1.65
VCAN-203ENST00000343200 C4orf26Q17RF5 130 aa4.72□□□□□ -1.65
VCAN-203ENST00000343200 Q8N6K4 173 aa4.72□□□□□ -1.65
VCAN-203ENST00000343200 HHLA3Q9XRX5 114 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms