RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 IGHV3-30P01768 117 aa9.63□□□□□ -0.87
CTSL-201ENST00000340342 IGHV3-33P01772 117 aa9.63□□□□□ -0.87
CTSL-201ENST00000340342 IGHV3-30-3P0DP02 117 aa9.63□□□□□ -0.87
CTSL-201ENST00000340342 IGHV3-30-5P0DP03 117 aa9.63□□□□□ -0.87
CTSL-201ENST00000340342 LINC01556Q5JQF7 62 aa9.63□□□□□ -0.87
CTSL-201ENST00000340342 NTM-AS1Q6ZSK4 140 aa9.63□□□□□ -0.87
CTSL-201ENST00000340342 DAZ4Q86SG3 579 aaKnown RBP9.63□□□□□ -0.87
CTSL-201ENST00000340342 DAZ3Q9NR90 486 aaKnown RBP9.63□□□□□ -0.87
CTSL-201ENST00000340342 TRAV9-2A0A087WT02 112 aa9.62□□□□□ -0.87
CTSL-201ENST00000340342 TRBV6-8A0A0A6YYG3 113 aa9.62□□□□□ -0.87
CTSL-201ENST00000340342 A0A1B0GVY2 172 aa9.62□□□□□ -0.87
CTSL-201ENST00000340342 SMKR1H3BMG3 65 aa9.62□□□□□ -0.87
CTSL-201ENST00000340342 K7EP13 123 aa9.62□□□□□ -0.87
CTSL-201ENST00000340342 NCR2O95944 276 aa9.62□□□□□ -0.87
CTSL-201ENST00000340342 CKS2P33552 79 aa9.62□□□□□ -0.87
CTSL-201ENST00000340342 HIST1H2BKO60814 126 aa9.61□□□□□ -0.87
CTSL-201ENST00000340342 PPBPP02775 128 aa9.61□□□□□ -0.87
CTSL-201ENST00000340342 HIST1H2BJP06899 126 aa9.61□□□□□ -0.87
CTSL-201ENST00000340342 HIST1H2BOP23527 126 aa9.61□□□□□ -0.87
CTSL-201ENST00000340342 HIST1H2BBP33778 126 aa9.61□□□□□ -0.87
CTSL-201ENST00000340342 HIST1H2BDP58876 126 aa9.61□□□□□ -0.87
CTSL-201ENST00000340342 HIST1H2BCP62807 126 aa9.61□□□□□ -0.87
CTSL-201ENST00000340342 HIST2H2BEQ16778 126 aa9.61□□□□□ -0.87
CTSL-201ENST00000340342 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.61□□□□□ -0.87
CTSL-201ENST00000340342 HIST1H2BHQ93079 126 aa9.61□□□□□ -0.87
CTSL-201ENST00000340342 HIST1H2BNQ99877 126 aa9.61□□□□□ -0.87
CTSL-201ENST00000340342 HIST1H2BMQ99879 126 aa9.61□□□□□ -0.87
CTSL-201ENST00000340342 ALKBH7Q9BT30 221 aaPredicted RBP9.61□□□□□ -0.87
CTSL-201ENST00000340342 D6R8Y8 96 aa9.6□□□□□ -0.87
CTSL-201ENST00000340342 NIT1Q86X76 327 aa9.6□□□□□ -0.87
CTSL-201ENST00000340342 ORMDL3Q8N138 153 aa9.6□□□□□ -0.87
CTSL-201ENST00000340342 MRAP2Q96G30 205 aa9.6□□□□□ -0.87
CTSL-201ENST00000340342 TMA7Q9Y2S6 64 aaKnown RBP9.6□□□□□ -0.87
CTSL-201ENST00000340342 SDHAF1A6NFY7 115 aa9.58□□□□□ -0.88
CTSL-201ENST00000340342 C10orf126Q8N4M7 172 aa9.58□□□□□ -0.88
CTSL-201ENST00000340342 PRELID3AQ96N28 172 aa9.58□□□□□ -0.88
CTSL-201ENST00000340342 CHCHD5Q9BSY4 110 aa9.58□□□□□ -0.88
CTSL-201ENST00000340342 TRBV25-1A0A075B6N4 114 aa9.57□□□□□ -0.88
CTSL-201ENST00000340342 TNP2Q05952 138 aa9.57□□□□□ -0.88
CTSL-201ENST00000340342 TMEM97Q5BJF2 176 aa9.57□□□□□ -0.88
CTSL-201ENST00000340342 NRACQ8N912 160 aa9.57□□□□□ -0.88
CTSL-201ENST00000340342 LAMTOR2Q9Y2Q5 125 aa9.57□□□□□ -0.88
CTSL-201ENST00000340342 IGHV1-24A0A0C4DH33 117 aa9.56□□□□□ -0.88
CTSL-201ENST00000340342 TRBV6-5A0A0K0K1A5 114 aa9.56□□□□□ -0.88
CTSL-201ENST00000340342 TMEM262E9PQX1 116 aa9.56□□□□□ -0.88
CTSL-201ENST00000340342 Q0VG73 95 aa9.56□□□□□ -0.88
CTSL-201ENST00000340342 COTL1Q14019 142 aa9.56□□□□□ -0.88
CTSL-201ENST00000340342 IQCJQ1A5X6 159 aa9.56□□□□□ -0.88
CTSL-201ENST00000340342 MPV17L2Q567V2 206 aa9.56□□□□□ -0.88
CTSL-201ENST00000340342 Q6ZRN7 208 aaPredicted RBP9.56□□□□□ -0.88
CTSL-201ENST00000340342 C18orf32Q8TCD1 76 aa9.56□□□□□ -0.88
CTSL-201ENST00000340342 Q9HAA7 133 aa9.56□□□□□ -0.88
CTSL-201ENST00000340342 ST20Q9HBF5 79 aa9.56□□□□□ -0.88
CTSL-201ENST00000340342 A0A087WX48 190 aa9.56□□□□□ -0.88
CTSL-201ENST00000340342 IBA57-AS1B1ANH7 110 aa9.56□□□□□ -0.88
CTSL-201ENST00000340342 TNFRSF6BO95407 300 aa9.56□□□□□ -0.88
CTSL-201ENST00000340342 PPP1R17O96001 155 aa9.56□□□□□ -0.88
CTSL-201ENST00000340342 NPYP01303 97 aa9.56□□□□□ -0.88
CTSL-201ENST00000340342 GAGE6Q13070 117 aa9.56□□□□□ -0.88
CTSL-201ENST00000340342 NFE4Q86UQ8 179 aa9.56□□□□□ -0.88
CTSL-201ENST00000340342 TMEM70Q9BUB7 260 aa9.56□□□□□ -0.88
CTSL-201ENST00000340342 NDUFA6P56556 154 aa9.55□□□□□ -0.88
CTSL-201ENST00000340342 TMEM243Q9BU79 118 aa9.55□□□□□ -0.88
CTSL-201ENST00000340342 S100A6P06703 90 aa9.54□□□□□ -0.88
CTSL-201ENST00000340342 PMCHP20382 165 aa9.54□□□□□ -0.88
CTSL-201ENST00000340342 AMTP48728 403 aa9.54□□□□□ -0.88
CTSL-201ENST00000340342 POLR2KP53803 58 aaKnown RBP9.54□□□□□ -0.88
CTSL-201ENST00000340342 BAGE3Q86Y29 109 aa9.54□□□□□ -0.88
CTSL-201ENST00000340342 Q8N976 141 aa9.54□□□□□ -0.88
CTSL-201ENST00000340342 MAP1LC3AQ9H492 121 aa9.54□□□□□ -0.88
CTSL-201ENST00000340342 KLK12Q9UKR0 248 aa9.54□□□□□ -0.88
CTSL-201ENST00000340342 I3L3M4 83 aa9.53□□□□□ -0.88
CTSL-201ENST00000340342 TSHBP01222 138 aa9.53□□□□□ -0.88
CTSL-201ENST00000340342 SUMO2P61956 95 aaKnown RBP9.53□□□□□ -0.88
CTSL-201ENST00000340342 COA6Q5JTJ3 125 aaKnown RBP9.53□□□□□ -0.88
CTSL-201ENST00000340342 C20orf78Q9BR46 151 aa9.53□□□□□ -0.88
CTSL-201ENST00000340342 CHCHD7Q9BUK0 85 aa9.53□□□□□ -0.88
CTSL-201ENST00000340342 DNAH5Q8TE73 4624 aa9.53□□□□□ -0.88
CTSL-201ENST00000340342 TRBV27A0A0K0K1C4 114 aa9.52□□□□□ -0.89
CTSL-201ENST00000340342 LOC389332A0A1B0GUA5 103 aa9.52□□□□□ -0.89
CTSL-201ENST00000340342 PRSS47A8MTI9 375 aa9.52□□□□□ -0.89
CTSL-201ENST00000340342 RBX1P62877 108 aa9.52□□□□□ -0.89
CTSL-201ENST00000340342 LAGE3Q14657 143 aa9.52□□□□□ -0.89
CTSL-201ENST00000340342 ANGP03950 147 aaKnown RBP9.51□□□□□ -0.89
CTSL-201ENST00000340342 PRSS3P2Q8NHM4 247 aa9.51□□□□□ -0.89
CTSL-201ENST00000340342 DYNC1H1Q14204 4646 aaKnown RBP9.51□□□□□ -0.89
CTSL-201ENST00000340342 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.5□□□□□ -0.89
CTSL-201ENST00000340342 IGKV2-29A2NJV5 120 aaPredicted RBP9.5□□□□□ -0.89
CTSL-201ENST00000340342 UBE2L6O14933 153 aa9.5□□□□□ -0.89
CTSL-201ENST00000340342 PKIAP61925 76 aa9.5□□□□□ -0.89
CTSL-201ENST00000340342 UBE2WQ96B02 151 aa9.5□□□□□ -0.89
CTSL-201ENST00000340342 IGLV4-60A0A075B6I1 120 aa9.49□□□□□ -0.89
CTSL-201ENST00000340342 VCYO14598 125 aa9.49□□□□□ -0.89
CTSL-201ENST00000340342 SERF1AO75920 110 aa9.49□□□□□ -0.89
CTSL-201ENST00000340342 LINC00614P0C842 121 aa9.49□□□□□ -0.89
CTSL-201ENST00000340342 IFI27P40305 119 aaPredicted RBP9.49□□□□□ -0.89
CTSL-201ENST00000340342 SNRPEP62304 92 aaKnown RBP9.49□□□□□ -0.89
CTSL-201ENST00000340342 RPL32P62910 135 aaKnown RBP9.49□□□□□ -0.89
CTSL-201ENST00000340342 CLPSL2Q6UWE3 100 aa9.49□□□□□ -0.89
CTSL-201ENST00000340342 Q8N8P6 123 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms