RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 UBE2D3P61077 147 aa10.33□□□□□ -0.76
RPA3-201ENST00000223129 UBE2D2P62837 147 aa10.33□□□□□ -0.76
RPA3-201ENST00000223129 SH2D6Q7Z4S9 175 aa10.33□□□□□ -0.76
RPA3-201ENST00000223129 GNB1LQ9BYB4 327 aa10.33□□□□□ -0.76
RPA3-201ENST00000223129 TNFRSF18Q9Y5U5 241 aa10.33□□□□□ -0.76
RPA3-201ENST00000223129 MRPL51Q4U2R6 128 aaKnown RBP10.32□□□□□ -0.76
RPA3-201ENST00000223129 M0R143 59 aa10.31□□□□□ -0.76
RPA3-201ENST00000223129 EREGO14944 169 aa10.31□□□□□ -0.76
RPA3-201ENST00000223129 NCR2O95944 276 aa10.31□□□□□ -0.76
RPA3-201ENST00000223129 MT-ND6P03923 174 aa10.31□□□□□ -0.76
RPA3-201ENST00000223129 MRPL52Q86TS9 123 aaKnown RBP10.31□□□□□ -0.76
RPA3-201ENST00000223129 GTSF1LQ9H1H1 148 aa10.31□□□□□ -0.76
RPA3-201ENST00000223129 LINC00310P59036 64 aa10.31□□□□□ -0.76
RPA3-201ENST00000223129 DNAJC30Q96LL9 226 aa10.31□□□□□ -0.76
RPA3-201ENST00000223129 SERF1AO75920 110 aa10.3□□□□□ -0.76
RPA3-201ENST00000223129 TEX43Q6ZNM6 134 aa10.3□□□□□ -0.76
RPA3-201ENST00000223129 BAGE3Q86Y29 109 aa10.3□□□□□ -0.76
RPA3-201ENST00000223129 DEFB104AQ8WTQ1 72 aa10.3□□□□□ -0.76
RPA3-201ENST00000223129 MRAP2Q96G30 205 aa10.3□□□□□ -0.76
RPA3-201ENST00000223129 SNHG12Q9BXW3 62 aa10.3□□□□□ -0.76
RPA3-201ENST00000223129 TCAPO15273 167 aa10.29□□□□□ -0.76
RPA3-201ENST00000223129 MRPS16Q9Y3D3 137 aaKnown RBP10.29□□□□□ -0.76
RPA3-201ENST00000223129 OR10J3Q5JRS4 329 aa10.29□□□□□ -0.76
RPA3-201ENST00000223129 TMEM136Q6ZRR5 245 aa10.29□□□□□ -0.76
RPA3-201ENST00000223129 CKS2P33552 79 aa10.28□□□□□ -0.76
RPA3-201ENST00000223129 RYR2Q92736 4967 aa10.28□□□□□ -0.76
RPA3-201ENST00000223129 IGLV2-18A0A075B6J9 118 aa10.28□□□□□ -0.76
RPA3-201ENST00000223129 D6R8Y8 96 aa10.28□□□□□ -0.76
RPA3-201ENST00000223129 UPK3BQ9BT76 320 aa10.28□□□□□ -0.76
RPA3-201ENST00000223129 Q9H8V8 135 aa10.28□□□□□ -0.76
RPA3-201ENST00000223129 TIRAPP58753 221 aa10.27□□□□□ -0.77
RPA3-201ENST00000223129 DAZ4Q86SG3 579 aaKnown RBP10.27□□□□□ -0.77
RPA3-201ENST00000223129 WFDC10BQ8IUB3 73 aa10.27□□□□□ -0.77
RPA3-201ENST00000223129 NRACQ8N912 160 aa10.27□□□□□ -0.77
RPA3-201ENST00000223129 DAZ3Q9NR90 486 aaKnown RBP10.27□□□□□ -0.77
RPA3-201ENST00000223129 LELP1Q5T871 98 aa10.26□□□□□ -0.77
RPA3-201ENST00000223129 MIEN1Q9BRT3 115 aa10.26□□□□□ -0.77
RPA3-201ENST00000223129 SDHAF1A6NFY7 115 aa10.26□□□□□ -0.77
RPA3-201ENST00000223129 HLA-DQA1P01909 254 aa10.26□□□□□ -0.77
RPA3-201ENST00000223129 NTM-AS1Q6ZSK4 140 aa10.26□□□□□ -0.77
RPA3-201ENST00000223129 ST20Q9HBF5 79 aa10.26□□□□□ -0.77
RPA3-201ENST00000223129 RYR3Q15413 4870 aa10.26□□□□□ -0.77
RPA3-201ENST00000223129 TRBV6-5A0A0K0K1A5 114 aa10.25□□□□□ -0.77
RPA3-201ENST00000223129 VAMP8Q9BV40 100 aa10.25□□□□□ -0.77
RPA3-201ENST00000223129 M0R2N4 97 aa10.24□□□□□ -0.77
RPA3-201ENST00000223129 SIVA1O15304 175 aa10.24□□□□□ -0.77
RPA3-201ENST00000223129 KIAA1644Q3SXP7 199 aa10.24□□□□□ -0.77
RPA3-201ENST00000223129 DNAH6Q9C0G6 4158 aa10.24□□□□□ -0.77
RPA3-201ENST00000223129 TRBV6-8A0A0A6YYG3 113 aa10.24□□□□□ -0.77
RPA3-201ENST00000223129 TRAV8-6A0A0B4J262 113 aa10.24□□□□□ -0.77
RPA3-201ENST00000223129 TNFRSF6BO95407 300 aa10.24□□□□□ -0.77
RPA3-201ENST00000223129 NPYP01303 97 aa10.24□□□□□ -0.77
RPA3-201ENST00000223129 ORMDL3Q8N138 153 aa10.24□□□□□ -0.77
RPA3-201ENST00000223129 TMEM70Q9BUB7 260 aa10.24□□□□□ -0.77
RPA3-201ENST00000223129 POLR2KP53803 58 aaKnown RBP10.23□□□□□ -0.77
RPA3-201ENST00000223129 PRELID3AQ96N28 172 aa10.23□□□□□ -0.77
RPA3-201ENST00000223129 PPP1R17O96001 155 aa10.23□□□□□ -0.77
RPA3-201ENST00000223129 APCSP02743 223 aa10.23□□□□□ -0.77
RPA3-201ENST00000223129 PPBPP02775 128 aa10.23□□□□□ -0.77
RPA3-201ENST00000223129 SUMO2P61956 95 aaKnown RBP10.23□□□□□ -0.77
RPA3-201ENST00000223129 PMCHP20382 165 aa10.22□□□□□ -0.77
RPA3-201ENST00000223129 Q8N3U1 123 aa10.22□□□□□ -0.77
RPA3-201ENST00000223129 PAM16Q9Y3D7 125 aa10.22□□□□□ -0.77
RPA3-201ENST00000223129 I3L3M4 83 aa10.21□□□□□ -0.77
RPA3-201ENST00000223129 AMTP48728 403 aa10.21□□□□□ -0.77
RPA3-201ENST00000223129 KRTDAPP60985 99 aa10.21□□□□□ -0.77
RPA3-201ENST00000223129 COTL1Q14019 142 aa10.21□□□□□ -0.77
RPA3-201ENST00000223129 Q8N976 141 aa10.21□□□□□ -0.77
RPA3-201ENST00000223129 TMEM97Q5BJF2 176 aa10.21□□□□□ -0.78
RPA3-201ENST00000223129 TRBV27A0A0K0K1C4 114 aa10.2□□□□□ -0.78
RPA3-201ENST00000223129 C20orf78Q9BR46 151 aa10.2□□□□□ -0.78
RPA3-201ENST00000223129 TRBV25-1A0A075B6N4 114 aa10.19□□□□□ -0.78
RPA3-201ENST00000223129 IGHV1-24A0A0C4DH33 117 aa10.19□□□□□ -0.78
RPA3-201ENST00000223129 NBDYA0A0U1RRE5 68 aa10.19□□□□□ -0.78
RPA3-201ENST00000223129 VCYO14598 125 aa10.19□□□□□ -0.78
RPA3-201ENST00000223129 IGHV3-30P01768 117 aa10.19□□□□□ -0.78
RPA3-201ENST00000223129 IGHV3-33P01772 117 aa10.19□□□□□ -0.78
RPA3-201ENST00000223129 DNAH10OSP0CZ25 163 aa10.19□□□□□ -0.78
RPA3-201ENST00000223129 IGHV3-30-3P0DP02 117 aa10.19□□□□□ -0.78
RPA3-201ENST00000223129 IGHV3-30-5P0DP03 117 aa10.19□□□□□ -0.78
RPA3-201ENST00000223129 CHCHD5Q9BSY4 110 aa10.19□□□□□ -0.78
RPA3-201ENST00000223129 KRTAP1-5Q9BYS1 174 aa10.19□□□□□ -0.78
RPA3-201ENST00000223129 LOC389332A0A1B0GUA5 103 aa10.19□□□□□ -0.78
RPA3-201ENST00000223129 TSHBP01222 138 aa10.19□□□□□ -0.78
RPA3-201ENST00000223129 NIT1Q86X76 327 aa10.19□□□□□ -0.78
RPA3-201ENST00000223129 TMEM262E9PQX1 116 aa10.18□□□□□ -0.78
RPA3-201ENST00000223129 ZNF25P17030 456 aaPredicted RBP10.18□□□□□ -0.78
RPA3-201ENST00000223129 DNAH2Q9P225 4427 aa10.18□□□□□ -0.78
RPA3-201ENST00000223129 G0S2P27469 103 aa10.17□□□□□ -0.78
RPA3-201ENST00000223129 GAGE6Q13070 117 aa10.17□□□□□ -0.78
RPA3-201ENST00000223129 LINC01556Q5JQF7 62 aa10.17□□□□□ -0.78
RPA3-201ENST00000223129 Q6ZR54 194 aa10.17□□□□□ -0.78
RPA3-201ENST00000223129 SMIM2Q9BVW6 85 aa10.17□□□□□ -0.78
RPA3-201ENST00000223129 C18orf32Q8TCD1 76 aa10.17□□□□□ -0.78
RPA3-201ENST00000223129 TMEM243Q9BU79 118 aa10.17□□□□□ -0.78
RPA3-201ENST00000223129 LAMTOR2Q9Y2Q5 125 aa10.17□□□□□ -0.78
RPA3-201ENST00000223129 C3orf79P0CE67 100 aa10.16□□□□□ -0.78
RPA3-201ENST00000223129 SPATA45Q537H7 98 aa10.16□□□□□ -0.78
RPA3-201ENST00000223129 ALKBH7Q9BT30 221 aaPredicted RBP10.16□□□□□ -0.78
RPA3-201ENST00000223129 CHCHD7Q9BUK0 85 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms