RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 UBE2D1P51668 147 aa9.65□□□□□ -0.86
CTNS-201ENST00000046640 C9orf85Q96MD7 179 aa9.65□□□□□ -0.86
CTNS-201ENST00000046640 CDIP1Q9H305 208 aa9.65□□□□□ -0.86
CTNS-201ENST00000046640 SPINK8P0C7L1 97 aa9.65□□□□□ -0.86
CTNS-201ENST00000046640 C2CD3Q4AC94 2353 aa9.65□□□□□ -0.86
CTNS-201ENST00000046640 RBMY1BA6NDE4 496 aaKnown RBP9.65□□□□□ -0.87
CTNS-201ENST00000046640 RBMY1EA6NEQ0 496 aaKnown RBP9.65□□□□□ -0.87
CTNS-201ENST00000046640 PPP1R17O96001 155 aa9.65□□□□□ -0.87
CTNS-201ENST00000046640 MT-ATP8P03928 68 aa9.65□□□□□ -0.87
CTNS-201ENST00000046640 RBMY1DP0C7P1 496 aaKnown RBP9.65□□□□□ -0.87
CTNS-201ENST00000046640 C1QTNF4Q9BXJ3 329 aa9.65□□□□□ -0.87
CTNS-201ENST00000046640 Q9UF83 564 aa9.65□□□□□ -0.87
CTNS-201ENST00000046640 J3QQQ9 107 aa9.64□□□□□ -0.87
CTNS-201ENST00000046640 DYNLRB2Q8TF09 96 aa9.64□□□□□ -0.87
CTNS-201ENST00000046640 M0QY20 66 aa9.63□□□□□ -0.87
CTNS-201ENST00000046640 IGHV3-30P01768 117 aa9.63□□□□□ -0.87
CTNS-201ENST00000046640 IGHV3-30-5P0DP03 117 aa9.63□□□□□ -0.87
CTNS-201ENST00000046640 FHL3Q13643 280 aa9.63□□□□□ -0.87
CTNS-201ENST00000046640 CEMP1Q6PRD7 247 aaPredicted RBP9.63□□□□□ -0.87
CTNS-201ENST00000046640 TRPT1Q86TN4 253 aaKnown RBP9.63□□□□□ -0.87
CTNS-201ENST00000046640 IGHV3OR16-12A0A075B7B8 117 aa9.63□□□□□ -0.87
CTNS-201ENST00000046640 NPC2P61916 151 aa9.63□□□□□ -0.87
CTNS-201ENST00000046640 Q6ZSV7 163 aa9.63□□□□□ -0.87
CTNS-201ENST00000046640 AKAP9Q99996 3911 aa9.63□□□□□ -0.87
CTNS-201ENST00000046640 A0A0J9YXV3 536 aa9.62□□□□□ -0.87
CTNS-201ENST00000046640 A4D1N5 150 aa9.62□□□□□ -0.87
CTNS-201ENST00000046640 H3BMM0 161 aa9.62□□□□□ -0.87
CTNS-201ENST00000046640 Q1RN00 199 aa9.62□□□□□ -0.87
CTNS-201ENST00000046640 POM121L12Q8N7R1 296 aa9.62□□□□□ -0.87
CTNS-201ENST00000046640 CARD19Q96LW7 228 aa9.62□□□□□ -0.87
CTNS-201ENST00000046640 SPXQ9BT56 116 aa9.62□□□□□ -0.87
CTNS-201ENST00000046640 XGP55808 180 aa9.61□□□□□ -0.87
CTNS-201ENST00000046640 RNF152Q8N8N0 203 aa9.61□□□□□ -0.87
CTNS-201ENST00000046640 ODF3Q96PU9 254 aa9.61□□□□□ -0.87
CTNS-201ENST00000046640 SLC25A29Q8N8R3 303 aa9.61□□□□□ -0.87
CTNS-201ENST00000046640 ESM1Q9NQ30 184 aa9.61□□□□□ -0.87
CTNS-201ENST00000046640 DNAJC9-AS1A6NH13 148 aa9.61□□□□□ -0.87
CTNS-201ENST00000046640 PAPPA-AS1Q5QFB9 102 aa9.61□□□□□ -0.87
CTNS-201ENST00000046640 TMEM141Q96I45 108 aa9.61□□□□□ -0.87
CTNS-201ENST00000046640 FASNP49327 2511 aaKnown RBP9.6□□□□□ -0.87
CTNS-201ENST00000046640 UBE2D3P61077 147 aa9.6□□□□□ -0.87
CTNS-201ENST00000046640 UBE2D2P62837 147 aa9.6□□□□□ -0.87
CTNS-201ENST00000046640 Q6ZUT4 128 aa9.6□□□□□ -0.87
CTNS-201ENST00000046640 LINC01587Q99440 93 aa9.6□□□□□ -0.87
CTNS-201ENST00000046640 XCL2Q9UBD3 114 aa9.6□□□□□ -0.87
CTNS-201ENST00000046640 PEMTQ9UBM1 199 aa9.6□□□□□ -0.87
CTNS-201ENST00000046640 PRO1854Q9UHT4 67 aa9.6□□□□□ -0.87
CTNS-201ENST00000046640 PRSS2P07478 247 aa9.6□□□□□ -0.87
CTNS-201ENST00000046640 MUSTN1Q8IVN3 82 aa9.6□□□□□ -0.87
CTNS-201ENST00000046640 LRRC75A-AS1Q8N1F1 130 aa9.6□□□□□ -0.87
CTNS-201ENST00000046640 C10orf126Q8N4M7 172 aa9.6□□□□□ -0.87
CTNS-201ENST00000046640 C4orf3Q8WVX3 66 aa9.6□□□□□ -0.87
CTNS-201ENST00000046640 MAP6D1Q9H9H5 199 aa9.6□□□□□ -0.87
CTNS-201ENST00000046640 TRBV27A0A0K0K1C4 114 aa9.59□□□□□ -0.87
CTNS-201ENST00000046640 C9JAW5 83 aa9.59□□□□□ -0.87
CTNS-201ENST00000046640 TIMM17AQ99595 171 aa9.59□□□□□ -0.87
CTNS-201ENST00000046640 SETXQ7Z333 2677 aaKnown RBP9.59□□□□□ -0.87
CTNS-201ENST00000046640 A8MZ25 164 aa9.59□□□□□ -0.87
CTNS-201ENST00000046640 CD28P10747 220 aa9.59□□□□□ -0.87
CTNS-201ENST00000046640 Q8N2B8 174 aa9.59□□□□□ -0.87
CTNS-201ENST00000046640 ANKRD29Q8N6D5 301 aa9.59□□□□□ -0.87
CTNS-201ENST00000046640 RNF183Q96D59 192 aa9.59□□□□□ -0.87
CTNS-201ENST00000046640 HECTD1Q9ULT8 2610 aa9.59□□□□□ -0.87
CTNS-201ENST00000046640 TRGV11A0A075B6L2 103 aa9.58□□□□□ -0.88
CTNS-201ENST00000046640 TRAV8-3A0A0A6YYJ7 113 aa9.58□□□□□ -0.88
CTNS-201ENST00000046640 A8MWV9 139 aa9.58□□□□□ -0.88
CTNS-201ENST00000046640 DEFB114Q30KQ6 69 aa9.58□□□□□ -0.88
CTNS-201ENST00000046640 Q6ZSN1 163 aa9.58□□□□□ -0.88
CTNS-201ENST00000046640 ATP6V0E2Q8NHE4 81 aa9.58□□□□□ -0.88
CTNS-201ENST00000046640 AMELXQ99217 191 aa9.58□□□□□ -0.88
CTNS-201ENST00000046640 VCX2Q9H322 139 aa9.58□□□□□ -0.88
CTNS-201ENST00000046640 PDZD2O15018 2839 aa9.58□□□□□ -0.88
CTNS-201ENST00000046640 EIF4EBP3O60516 100 aaPredicted RBP9.58□□□□□ -0.88
CTNS-201ENST00000046640 IGHV3-38A0A0C4DH36 116 aa9.57□□□□□ -0.88
CTNS-201ENST00000046640 ZNF22P17026 224 aaPredicted RBP9.57□□□□□ -0.88
CTNS-201ENST00000046640 TEN1Q86WV5 123 aa9.57□□□□□ -0.88
CTNS-201ENST00000046640 YAE1D1Q9NRH1 226 aa9.57□□□□□ -0.88
CTNS-201ENST00000046640 TMEM223A0PJW6 202 aa9.56□□□□□ -0.88
CTNS-201ENST00000046640 LYRM7Q5U5X0 104 aa9.56□□□□□ -0.88
CTNS-201ENST00000046640 PPDPFLQ8WWR9 84 aa9.56□□□□□ -0.88
CTNS-201ENST00000046640 CITED2Q99967 270 aaPredicted RBP9.56□□□□□ -0.88
CTNS-201ENST00000046640 UNC79Q9P2D8 2635 aa9.56□□□□□ -0.88
CTNS-201ENST00000046640 TRBV6-5A0A0K0K1A5 114 aa9.56□□□□□ -0.88
CTNS-201ENST00000046640 RHODO00212 210 aa9.56□□□□□ -0.88
CTNS-201ENST00000046640 C20orf203Q8NBC4 194 aa9.56□□□□□ -0.88
CTNS-201ENST00000046640 ERG28Q9UKR5 140 aa9.56□□□□□ -0.88
CTNS-201ENST00000046640 IGLV4-3A0A075B6K6 122 aa9.55□□□□□ -0.88
CTNS-201ENST00000046640 I3L3M4 83 aa9.55□□□□□ -0.88
CTNS-201ENST00000046640 LEPROTO15243 131 aa9.55□□□□□ -0.88
CTNS-201ENST00000046640 SLC25A20O43772 301 aa9.55□□□□□ -0.88
CTNS-201ENST00000046640 CCL24O00175 119 aa9.54□□□□□ -0.88
CTNS-201ENST00000046640 RPL32P62910 135 aaKnown RBP9.54□□□□□ -0.88
CTNS-201ENST00000046640 ODF3L2Q3SX64 289 aa9.54□□□□□ -0.88
CTNS-201ENST00000046640 TNFRSF18Q9Y5U5 241 aa9.54□□□□□ -0.88
CTNS-201ENST00000046640 FN1P02751 2386 aaKnown RBP9.54□□□□□ -0.88
CTNS-201ENST00000046640 IGHV3-33P01772 117 aa9.53□□□□□ -0.88
CTNS-201ENST00000046640 SS18L2Q9UHA2 77 aa9.53□□□□□ -0.88
CTNS-201ENST00000046640 TRBV20-1A0A075B6N2 111 aa9.53□□□□□ -0.88
CTNS-201ENST00000046640 M0R2P5 195 aa9.53□□□□□ -0.88
CTNS-201ENST00000046640 SMR3AQ99954 134 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms