RNA–Protein interactions for RNA: ENST00000602710.5

UBE2E3-209, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-209ENST00000602710 TNFRSF6BO95407 300 aa13.35□□□□□ -0.27
UBE2E3-209ENST00000602710 OR10J3Q5JRS4 329 aa13.35□□□□□ -0.27
UBE2E3-209ENST00000602710 NEXN-AS1Q8NBZ9 246 aa13.35□□□□□ -0.27
UBE2E3-209ENST00000602710 NIT2Q9NQR4 276 aa13.35□□□□□ -0.27
UBE2E3-209ENST00000602710 TRAV10A0A0B4J240 114 aa13.34□□□□□ -0.27
UBE2E3-209ENST00000602710 RHOHQ15669 191 aa13.34□□□□□ -0.27
UBE2E3-209ENST00000602710 PHLDA1Q8WV24 401 aaPredicted RBP13.33□□□□□ -0.28
UBE2E3-209ENST00000602710 PRADC1Q9BSG0 188 aa13.33□□□□□ -0.28
UBE2E3-209ENST00000602710 TGP01266 2768 aa13.33□□□□□ -0.28
UBE2E3-209ENST00000602710 GAGE12JA6NER3 117 aa13.32□□□□□ -0.28
UBE2E3-209ENST00000602710 GYPEP15421 78 aa13.32□□□□□ -0.28
UBE2E3-209ENST00000602710 GAGE1Q13065 139 aa13.32□□□□□ -0.28
UBE2E3-209ENST00000602710 GAGE4Q13068 117 aa13.32□□□□□ -0.28
UBE2E3-209ENST00000602710 GAGE5Q13069 117 aa13.32□□□□□ -0.28
UBE2E3-209ENST00000602710 GAGE13Q4V321 117 aa13.32□□□□□ -0.28
UBE2E3-209ENST00000602710 TRBV10-1A0A0K0K1A3 114 aa13.32□□□□□ -0.28
UBE2E3-209ENST00000602710 ZNRF2Q8NHG8 242 aa13.32□□□□□ -0.28
UBE2E3-209ENST00000602710 TNFRSF18Q9Y5U5 241 aa13.31□□□□□ -0.28
UBE2E3-209ENST00000602710 TRBV7-3A0A075B6L6 115 aa13.3□□□□□ -0.28
UBE2E3-209ENST00000602710 TRBV6-5A0A0K0K1A5 114 aa13.3□□□□□ -0.28
UBE2E3-209ENST00000602710 LOC389332A0A1B0GUA5 103 aa13.3□□□□□ -0.28
UBE2E3-209ENST00000602710 PPP1R17O96001 155 aa13.3□□□□□ -0.28
UBE2E3-209ENST00000602710 IQCJQ1A5X6 159 aa13.3□□□□□ -0.28
UBE2E3-209ENST00000602710 DNAJC30Q96LL9 226 aa13.3□□□□□ -0.28
UBE2E3-209ENST00000602710 ST20Q9HBF5 79 aa13.3□□□□□ -0.28
UBE2E3-209ENST00000602710 LAMTOR2Q9Y2Q5 125 aa13.3□□□□□ -0.28
UBE2E3-209ENST00000602710 C1orf196B1AJZ1 125 aa13.29□□□□□ -0.28
UBE2E3-209ENST00000602710 SUMO2P61956 95 aaKnown RBP13.29□□□□□ -0.28
UBE2E3-209ENST00000602710 RPL36AP83881 106 aaKnown RBP13.29□□□□□ -0.28
UBE2E3-209ENST00000602710 NEGR1Q7Z3B1 354 aa13.29□□□□□ -0.28
UBE2E3-209ENST00000602710 C18orf32Q8TCD1 76 aa13.29□□□□□ -0.28
UBE2E3-209ENST00000602710 DEFB104AQ8WTQ1 72 aa13.29□□□□□ -0.28
UBE2E3-209ENST00000602710 RPL36ALQ969Q0 106 aaKnown RBP13.29□□□□□ -0.28
UBE2E3-209ENST00000602710 SDHAF1A6NFY7 115 aa13.28□□□□□ -0.28
UBE2E3-209ENST00000602710 HIST1H2BKO60814 126 aa13.28□□□□□ -0.28
UBE2E3-209ENST00000602710 HIST1H2BJP06899 126 aa13.28□□□□□ -0.28
UBE2E3-209ENST00000602710 HIST1H2BOP23527 126 aa13.28□□□□□ -0.28
UBE2E3-209ENST00000602710 HIST1H2BBP33778 126 aa13.28□□□□□ -0.28
UBE2E3-209ENST00000602710 HIST1H2BDP58876 126 aa13.28□□□□□ -0.28
UBE2E3-209ENST00000602710 HIST1H2BCP62807 126 aa13.28□□□□□ -0.28
UBE2E3-209ENST00000602710 HIST2H2BEQ16778 126 aa13.28□□□□□ -0.28
UBE2E3-209ENST00000602710 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.28□□□□□ -0.28
UBE2E3-209ENST00000602710 HIST1H2BHQ93079 126 aa13.28□□□□□ -0.28
UBE2E3-209ENST00000602710 HIST1H2BNQ99877 126 aa13.28□□□□□ -0.28
UBE2E3-209ENST00000602710 HIST1H2BMQ99879 126 aa13.28□□□□□ -0.28
UBE2E3-209ENST00000602710 C20orf78Q9BR46 151 aa13.28□□□□□ -0.28
UBE2E3-209ENST00000602710 POLR2KP53803 58 aaKnown RBP13.28□□□□□ -0.28
UBE2E3-209ENST00000602710 TMEM70Q9BUB7 260 aa13.28□□□□□ -0.28
UBE2E3-209ENST00000602710 MAP1LC3AQ9H492 121 aa13.28□□□□□ -0.28
UBE2E3-209ENST00000602710 A0A096LPF7 62 aa13.27□□□□□ -0.29
UBE2E3-209ENST00000602710 IGHV3-38A0A0C4DH36 116 aa13.27□□□□□ -0.29
UBE2E3-209ENST00000602710 LINC00694P0DN24 101 aa13.27□□□□□ -0.29
UBE2E3-209ENST00000602710 UBE2D3P61077 147 aa13.27□□□□□ -0.29
UBE2E3-209ENST00000602710 UBE2D2P62837 147 aa13.27□□□□□ -0.29
UBE2E3-209ENST00000602710 PRSS47A8MTI9 375 aa13.25□□□□□ -0.29
UBE2E3-209ENST00000602710 IGLL5B9A064 214 aa13.25□□□□□ -0.29
UBE2E3-209ENST00000602710 H3BNG1 76 aa13.25□□□□□ -0.29
UBE2E3-209ENST00000602710 IFI27P40305 119 aaPredicted RBP13.25□□□□□ -0.29
UBE2E3-209ENST00000602710 SMIM2Q9BVW6 85 aa13.25□□□□□ -0.29
UBE2E3-209ENST00000602710 ICOSQ9Y6W8 199 aa13.25□□□□□ -0.29
UBE2E3-209ENST00000602710 IGLV2-18A0A075B6J9 118 aa13.24□□□□□ -0.29
UBE2E3-209ENST00000602710 NUDT3O95989 172 aa13.24□□□□□ -0.29
UBE2E3-209ENST00000602710 MRPL23Q16540 153 aaKnown RBP13.24□□□□□ -0.29
UBE2E3-209ENST00000602710 CEMP1Q6PRD7 247 aaPredicted RBP13.24□□□□□ -0.29
UBE2E3-209ENST00000602710 VCYO14598 125 aa13.24□□□□□ -0.29
UBE2E3-209ENST00000602710 PRSS3P2Q8NHM4 247 aa13.24□□□□□ -0.29
UBE2E3-209ENST00000602710 TRBV27A0A0K0K1C4 114 aa13.23□□□□□ -0.29
UBE2E3-209ENST00000602710 PMCHP20382 165 aa13.23□□□□□ -0.29
UBE2E3-209ENST00000602710 RAB5BP61020 215 aa13.23□□□□□ -0.29
UBE2E3-209ENST00000602710 RPL32P62910 135 aaKnown RBP13.23□□□□□ -0.29
UBE2E3-209ENST00000602710 Q0VG73 95 aa13.23□□□□□ -0.29
UBE2E3-209ENST00000602710 ATP6V0E2Q8NHE4 81 aa13.23□□□□□ -0.29
UBE2E3-209ENST00000602710 URB1-AS1Q96HZ7 61 aa13.23□□□□□ -0.29
UBE2E3-209ENST00000602710 I3L3M4 83 aa13.22□□□□□ -0.29
UBE2E3-209ENST00000602710 DAZ4Q86SG3 579 aaKnown RBP13.22□□□□□ -0.29
UBE2E3-209ENST00000602710 NIT1Q86X76 327 aa13.22□□□□□ -0.29
UBE2E3-209ENST00000602710 Q8N8P6 123 aa13.22□□□□□ -0.29
UBE2E3-209ENST00000602710 DAZ3Q9NR90 486 aaKnown RBP13.22□□□□□ -0.29
UBE2E3-209ENST00000602710 TCAPO15273 167 aa13.21□□□□□ -0.29
UBE2E3-209ENST00000602710 ZFAND6Q6FIF0 208 aa13.21□□□□□ -0.29
UBE2E3-209ENST00000602710 BAGE3Q86Y29 109 aa13.21□□□□□ -0.29
UBE2E3-209ENST00000602710 WWC2-AS2Q96NR7 200 aa13.21□□□□□ -0.29
UBE2E3-209ENST00000602710 NXT2Q9NPJ8 142 aaKnown RBP13.21□□□□□ -0.29
UBE2E3-209ENST00000602710 TSHBP01222 138 aa13.2□□□□□ -0.3
UBE2E3-209ENST00000602710 NUPR2A6NF83 97 aa13.2□□□□□ -0.3
UBE2E3-209ENST00000602710 NDUFA6P56556 154 aa13.2□□□□□ -0.3
UBE2E3-209ENST00000602710 MUC7Q8TAX7 377 aa13.2□□□□□ -0.3
UBE2E3-209ENST00000602710 LINC00614P0C842 121 aa13.19□□□□□ -0.3
UBE2E3-209ENST00000602710 LINC00310P59036 64 aa13.19□□□□□ -0.3
UBE2E3-209ENST00000602710 RNASEKQ6P5S7 137 aaKnown RBP13.19□□□□□ -0.3
UBE2E3-209ENST00000602710 NTM-AS1Q6ZSK4 140 aa13.19□□□□□ -0.3
UBE2E3-209ENST00000602710 FA2HQ7L5A8 372 aa13.19□□□□□ -0.3
UBE2E3-209ENST00000602710 C15orf53Q8NAA6 179 aa13.19□□□□□ -0.3
UBE2E3-209ENST00000602710 KIR2DL4Q99706 377 aa13.19□□□□□ -0.3
UBE2E3-209ENST00000602710 DNAH7Q8WXX0 4024 aa13.19□□□□□ -0.3
UBE2E3-209ENST00000602710 NUPR1O60356 82 aa13.18□□□□□ -0.3
UBE2E3-209ENST00000602710 SERF1AO75920 110 aa13.18□□□□□ -0.3
UBE2E3-209ENST00000602710 COTL1Q14019 142 aa13.18□□□□□ -0.3
UBE2E3-209ENST00000602710 GTSF1LQ9H1H1 148 aa13.18□□□□□ -0.3
UBE2E3-209ENST00000602710 TMA7Q9Y2S6 64 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms