RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 AP1S3Q96PC3 154 aa8.03□□□□□ -1.12
LIG1-217ENST00000599165 P01737 135 aa8.02□□□□□ -1.13
LIG1-217ENST00000599165 TAGLN2P37802 199 aaKnown RBP8.02□□□□□ -1.13
LIG1-217ENST00000599165 CTRLP40313 264 aa8.02□□□□□ -1.13
LIG1-217ENST00000599165 SUMO4Q6EEV6 95 aa8.02□□□□□ -1.13
LIG1-217ENST00000599165 ATRAIDQ6UW56 229 aa8.02□□□□□ -1.13
LIG1-217ENST00000599165 LYZL1Q6UWQ5 148 aa8.02□□□□□ -1.13
LIG1-217ENST00000599165 TPPP3Q9BW30 176 aa8.02□□□□□ -1.13
LIG1-217ENST00000599165 RNASE7Q9H1E1 156 aaKnown RBP8.02□□□□□ -1.13
LIG1-217ENST00000599165 KLK12Q9UKR0 248 aa8.02□□□□□ -1.13
LIG1-217ENST00000599165 TRAV8-3A0A0A6YYJ7 113 aa8.01□□□□□ -1.13
LIG1-217ENST00000599165 F5H697 171 aa8.01□□□□□ -1.13
LIG1-217ENST00000599165 LECT2O14960 151 aa8.01□□□□□ -1.13
LIG1-217ENST00000599165 GCSHP23434 173 aa8.01□□□□□ -1.13
LIG1-217ENST00000599165 HAMPP81172 84 aa8.01□□□□□ -1.13
LIG1-217ENST00000599165 MPV17L2Q567V2 206 aa8.01□□□□□ -1.13
LIG1-217ENST00000599165 GTSF1Q8WW33 167 aa8.01□□□□□ -1.13
LIG1-217ENST00000599165 DAZAP1Q96EP5 407 aaKnown RBP8.01□□□□□ -1.13
LIG1-217ENST00000599165 CHCHD7Q9BUK0 85 aa8.01□□□□□ -1.13
LIG1-217ENST00000599165 CNFNQ9BYD5 112 aa8.01□□□□□ -1.13
LIG1-217ENST00000599165 IGLV5-52A0A0A0MRZ9 124 aa8□□□□□ -1.13
LIG1-217ENST00000599165 TMEM250H0YL14 139 aa8□□□□□ -1.13
LIG1-217ENST00000599165 CACNG7P62955 275 aa8□□□□□ -1.13
LIG1-217ENST00000599165 BLOC1S1P78537 153 aa8□□□□□ -1.13
LIG1-217ENST00000599165 ENHOQ6UWT2 76 aa8□□□□□ -1.13
LIG1-217ENST00000599165 NTN5Q8WTR8 489 aaPredicted RBP8□□□□□ -1.13
LIG1-217ENST00000599165 TM2D2Q9BX73 214 aa8□□□□□ -1.13
LIG1-217ENST00000599165 FAM30AQ9NZY2 134 aa8□□□□□ -1.13
LIG1-217ENST00000599165 F2Z2F3 143 aa7.99□□□□□ -1.13
LIG1-217ENST00000599165 MGPP08493 103 aa7.99□□□□□ -1.13
LIG1-217ENST00000599165 NTF3P20783 257 aa7.99□□□□□ -1.13
LIG1-217ENST00000599165 TOR2AQ5JU69 321 aa7.99□□□□□ -1.13
LIG1-217ENST00000599165 BAALCQ8WXS3 180 aa7.99□□□□□ -1.13
LIG1-217ENST00000599165 UBE2WQ96B02 151 aa7.99□□□□□ -1.13
LIG1-217ENST00000599165 RPP21Q9H633 154 aaKnown RBP7.99□□□□□ -1.13
LIG1-217ENST00000599165 VPS13BQ7Z7G8 4022 aa7.98□□□□□ -1.13
LIG1-217ENST00000599165 SMIM17P0DL12 118 aa7.98□□□□□ -1.13
LIG1-217ENST00000599165 WDR73Q6P4I2 378 aa7.98□□□□□ -1.13
LIG1-217ENST00000599165 Q8N976 141 aa7.98□□□□□ -1.13
LIG1-217ENST00000599165 BIN3Q9NQY0 253 aa7.98□□□□□ -1.13
LIG1-217ENST00000599165 URGCP-MRPS24S4R325 110 aa7.98□□□□□ -1.13
LIG1-217ENST00000599165 A0A087WX48 190 aa7.97□□□□□ -1.13
LIG1-217ENST00000599165 XKRY2A2RUG3 117 aa7.97□□□□□ -1.13
LIG1-217ENST00000599165 FOXA3P55318 350 aaPredicted RBP7.97□□□□□ -1.13
LIG1-217ENST00000599165 IQCJQ1A5X6 159 aa7.97□□□□□ -1.13
LIG1-217ENST00000599165 KRTAP26-1Q6PEX3 210 aa7.97□□□□□ -1.13
LIG1-217ENST00000599165 DPH3P1Q9H4G8 78 aa7.97□□□□□ -1.13
LIG1-217ENST00000599165 IGKV2D-24A0A075B6R9 120 aa7.96□□□□□ -1.14
LIG1-217ENST00000599165 SRP19P09132 144 aaKnown RBP7.96□□□□□ -1.14
LIG1-217ENST00000599165 RBX1P62877 108 aa7.96□□□□□ -1.14
LIG1-217ENST00000599165 LINC01620Q4KN68 170 aa7.96□□□□□ -1.14
LIG1-217ENST00000599165 RASL11AQ6T310 242 aa7.96□□□□□ -1.14
LIG1-217ENST00000599165 Q6ZSA8 131 aa7.96□□□□□ -1.14
LIG1-217ENST00000599165 FAM231DQ6ZW35 169 aa7.96□□□□□ -1.14
LIG1-217ENST00000599165 C15orf54Q8N8G6 183 aa7.96□□□□□ -1.14
LIG1-217ENST00000599165 FAM210AQ96ND0 272 aa7.96□□□□□ -1.14
LIG1-217ENST00000599165 CHCHD5Q9BSY4 110 aa7.96□□□□□ -1.14
LIG1-217ENST00000599165 TMEM70Q9BUB7 260 aa7.96□□□□□ -1.14
LIG1-217ENST00000599165 PRR34Q9NV39 138 aa7.96□□□□□ -1.14
LIG1-217ENST00000599165 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.95□□□□□ -1.14
LIG1-217ENST00000599165 TRAV26-2A0A0B4J265 109 aa7.95□□□□□ -1.14
LIG1-217ENST00000599165 TMEM262E9PQX1 116 aa7.95□□□□□ -1.14
LIG1-217ENST00000599165 NDUFS6O75380 124 aaKnown RBP7.95□□□□□ -1.14
LIG1-217ENST00000599165 TRGC1P0CF51 173 aa7.95□□□□□ -1.14
LIG1-217ENST00000599165 GAGE6Q13070 117 aa7.95□□□□□ -1.14
LIG1-217ENST00000599165 GATD1Q8NB37 220 aa7.95□□□□□ -1.14
LIG1-217ENST00000599165 DEFB104AQ8WTQ1 72 aa7.95□□□□□ -1.14
LIG1-217ENST00000599165 FLG2Q5D862 2391 aaPredicted RBP7.95□□□□□ -1.14
LIG1-217ENST00000599165 EPM2AB3EWF7 344 aa7.94□□□□□ -1.14
LIG1-217ENST00000599165 C9JQL5 133 aa7.94□□□□□ -1.14
LIG1-217ENST00000599165 SMR3BP02814 79 aaPredicted RBP7.94□□□□□ -1.14
LIG1-217ENST00000599165 ELOBQ15370 118 aa7.94□□□□□ -1.14
LIG1-217ENST00000599165 TWIST1Q15672 202 aa7.94□□□□□ -1.14
LIG1-217ENST00000599165 TMEM97Q5BJF2 176 aa7.94□□□□□ -1.14
LIG1-217ENST00000599165 LINC01551Q86U37 167 aa7.94□□□□□ -1.14
LIG1-217ENST00000599165 C20orf203Q8NBC4 194 aa7.94□□□□□ -1.14
LIG1-217ENST00000599165 RMI2Q96E14 147 aa7.94□□□□□ -1.14
LIG1-217ENST00000599165 GFRA4Q9GZZ7 299 aa7.94□□□□□ -1.14
LIG1-217ENST00000599165 NIT2Q9NQR4 276 aa7.94□□□□□ -1.14
LIG1-217ENST00000599165 COX11Q9Y6N1 276 aa7.94□□□□□ -1.14
LIG1-217ENST00000599165 MYCBP2O75592 4640 aa7.93□□□□□ -1.14
LIG1-217ENST00000599165 TRBV25-1A0A075B6N4 114 aa7.93□□□□□ -1.14
LIG1-217ENST00000599165 H7C1H1 209 aa7.93□□□□□ -1.14
LIG1-217ENST00000599165 GATCO43716 136 aaKnown RBP7.93□□□□□ -1.14
LIG1-217ENST00000599165 GAS8-AS1O95177 125 aa7.93□□□□□ -1.14
LIG1-217ENST00000599165 ANGP03950 147 aaKnown RBP7.93□□□□□ -1.14
LIG1-217ENST00000599165 CEBPGP53567 150 aa7.93□□□□□ -1.14
LIG1-217ENST00000599165 Q0VG73 95 aa7.93□□□□□ -1.14
LIG1-217ENST00000599165 Q5VSD8 79 aa7.93□□□□□ -1.14
LIG1-217ENST00000599165 CLPSL2Q6UWE3 100 aa7.93□□□□□ -1.14
LIG1-217ENST00000599165 PGLYRP4Q96LB8 373 aa7.93□□□□□ -1.14
LIG1-217ENST00000599165 IGLV4-60A0A075B6I1 120 aa7.92□□□□□ -1.14
LIG1-217ENST00000599165 IGHV1-24A0A0C4DH33 117 aa7.92□□□□□ -1.14
LIG1-217ENST00000599165 SRSF3P84103 164 aaKnown RBP7.92□□□□□ -1.14
LIG1-217ENST00000599165 CT83Q5H943 113 aa7.92□□□□□ -1.14
LIG1-217ENST00000599165 LINC00269Q8N2A0 174 aa7.92□□□□□ -1.14
LIG1-217ENST00000599165 RPL39LQ96EH5 51 aaKnown RBP7.92□□□□□ -1.14
LIG1-217ENST00000599165 SMIM7Q9BQ49 75 aa7.92□□□□□ -1.14
LIG1-217ENST00000599165 EIF5A2Q9GZV4 153 aaKnown RBP7.92□□□□□ -1.14
LIG1-217ENST00000599165 MIAQ16674 131 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms