RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 LINC00269Q8N2A0 174 aa11.55□□□□□ -0.56
MKS1-209ENST00000580127 OR10AG1Q8NH19 301 aa11.55□□□□□ -0.56
MKS1-209ENST00000580127 PRR34Q9NV39 138 aa11.55□□□□□ -0.56
MKS1-209ENST00000580127 OR5AL1P0C617 328 aa11.54□□□□□ -0.56
MKS1-209ENST00000580127 RBX1P62877 108 aa11.54□□□□□ -0.56
MKS1-209ENST00000580127 BAGE2Q86Y30 109 aa11.54□□□□□ -0.56
MKS1-209ENST00000580127 AP5S1Q9NUS5 200 aa11.54□□□□□ -0.56
MKS1-209ENST00000580127 VAX2Q9UIW0 290 aa11.54□□□□□ -0.56
MKS1-209ENST00000580127 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.53□□□□□ -0.56
MKS1-209ENST00000580127 H7C1H1 209 aa11.53□□□□□ -0.56
MKS1-209ENST00000580127 PAGE4O60829 102 aa11.53□□□□□ -0.56
MKS1-209ENST00000580127 PFDN1O60925 122 aa11.53□□□□□ -0.56
MKS1-209ENST00000580127 SSBP4Q9BWG4 385 aaPredicted RBP11.53□□□□□ -0.56
MKS1-209ENST00000580127 TRAV8-4A0A0B4J246 113 aa11.52□□□□□ -0.57
MKS1-209ENST00000580127 IGHV1-24A0A0C4DH33 117 aa11.52□□□□□ -0.57
MKS1-209ENST00000580127 P01737 135 aa11.52□□□□□ -0.57
MKS1-209ENST00000580127 GAGE6Q13070 117 aa11.52□□□□□ -0.57
MKS1-209ENST00000580127 SDIM1Q6ZPB5 146 aa11.52□□□□□ -0.57
MKS1-209ENST00000580127 Q6ZRU5 148 aa11.52□□□□□ -0.57
MKS1-209ENST00000580127 DAZAP1Q96EP5 407 aaKnown RBP11.52□□□□□ -0.57
MKS1-209ENST00000580127 AP1S3Q96PC3 154 aa11.52□□□□□ -0.57
MKS1-209ENST00000580127 SNAI2O43623 268 aa11.51□□□□□ -0.57
MKS1-209ENST00000580127 SSTP61278 116 aa11.51□□□□□ -0.57
MKS1-209ENST00000580127 SFT2D1Q8WV19 159 aa11.51□□□□□ -0.57
MKS1-209ENST00000580127 hDV102S1A0JD36 115 aa11.5□□□□□ -0.57
MKS1-209ENST00000580127 GZMBP10144 247 aa11.5□□□□□ -0.57
MKS1-209ENST00000580127 REG3AQ06141 175 aa11.5□□□□□ -0.57
MKS1-209ENST00000580127 IQCJQ1A5X6 159 aa11.5□□□□□ -0.57
MKS1-209ENST00000580127 NTM-AS1Q6ZSK4 140 aa11.5□□□□□ -0.57
MKS1-209ENST00000580127 DPH3P1Q9H4G8 78 aa11.5□□□□□ -0.57
MKS1-209ENST00000580127 IGHV3-64A0A075B6Q5 118 aa11.49□□□□□ -0.57
MKS1-209ENST00000580127 MUC21A0A0G2JKD1 596 aa11.49□□□□□ -0.57
MKS1-209ENST00000580127 MUC21A0A140T8X8 626 aa11.49□□□□□ -0.57
MKS1-209ENST00000580127 UMAD1C9J7I0 102 aa11.49□□□□□ -0.57
MKS1-209ENST00000580127 CLPSL2Q6UWE3 100 aa11.49□□□□□ -0.57
MKS1-209ENST00000580127 RNF185Q96GF1 192 aa11.49□□□□□ -0.57
MKS1-209ENST00000580127 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.49□□□□□ -0.57
MKS1-209ENST00000580127 ARPC5O15511 151 aa11.48□□□□□ -0.57
MKS1-209ENST00000580127 CNBPP62633 177 aaKnown RBP11.48□□□□□ -0.57
MKS1-209ENST00000580127 TMUB2Q71RG4 321 aa11.48□□□□□ -0.57
MKS1-209ENST00000580127 MLST8Q9BVC4 326 aa11.48□□□□□ -0.57
MKS1-209ENST00000580127 MBD3L1Q8WWY6 194 aa11.47□□□□□ -0.57
MKS1-209ENST00000580127 LRP1Q07954 4544 aaKnown RBP11.47□□□□□ -0.57
MKS1-209ENST00000580127 IGLV10-54A0A075B6I4 117 aa11.46□□□□□ -0.57
MKS1-209ENST00000580127 A0A1B0GUV1 79 aa11.46□□□□□ -0.57
MKS1-209ENST00000580127 RPS20P60866 119 aaKnown RBP11.46□□□□□ -0.57
MKS1-209ENST00000580127 CFAP161Q6P656 301 aa11.46□□□□□ -0.57
MKS1-209ENST00000580127 KRTAP26-1Q6PEX3 210 aa11.46□□□□□ -0.57
MKS1-209ENST00000580127 FAM213BQ8TBF2 198 aa11.46□□□□□ -0.57
MKS1-209ENST00000580127 TMEM243Q9BU79 118 aa11.46□□□□□ -0.57
MKS1-209ENST00000580127 BATF3Q9NR55 127 aa11.46□□□□□ -0.57
MKS1-209ENST00000580127 CYTL1Q9NRR1 136 aa11.46□□□□□ -0.57
MKS1-209ENST00000580127 KIF25-AS1Q9Y6Z4 181 aa11.46□□□□□ -0.57
MKS1-209ENST00000580127 SCO2A0A1W2PP80 73 aa11.45□□□□□ -0.58
MKS1-209ENST00000580127 UBE2L6O14933 153 aa11.45□□□□□ -0.58
MKS1-209ENST00000580127 MGPP08493 103 aa11.45□□□□□ -0.58
MKS1-209ENST00000580127 HNRNPA3P51991 378 aaKnown RBP11.45□□□□□ -0.58
MKS1-209ENST00000580127 CACNG7P62955 275 aa11.45□□□□□ -0.58
MKS1-209ENST00000580127 WDR73Q6P4I2 378 aa11.45□□□□□ -0.58
MKS1-209ENST00000580127 KCNRGQ8N5I3 272 aa11.45□□□□□ -0.58
MKS1-209ENST00000580127 XKRY2A2RUG3 117 aa11.44□□□□□ -0.58
MKS1-209ENST00000580127 M0QY20 66 aa11.44□□□□□ -0.58
MKS1-209ENST00000580127 CIRBPQ14011 172 aaKnown RBP11.44□□□□□ -0.58
MKS1-209ENST00000580127 C7orf33Q8WU49 177 aa11.44□□□□□ -0.58
MKS1-209ENST00000580127 TPPP3Q9BW30 176 aa11.44□□□□□ -0.58
MKS1-209ENST00000580127 F2Z2F3 143 aa11.43□□□□□ -0.58
MKS1-209ENST00000580127 H2AFB1P0C5Y9 115 aa11.43□□□□□ -0.58
MKS1-209ENST00000580127 FER1L6-AS1Q8NA97 138 aa11.43□□□□□ -0.58
MKS1-209ENST00000580127 A0A1B0GV50 99 aa11.42□□□□□ -0.58
MKS1-209ENST00000580127 RPL35P42766 123 aaKnown RBP11.42□□□□□ -0.58
MKS1-209ENST00000580127 SULT1A2P50226 295 aa11.42□□□□□ -0.58
MKS1-209ENST00000580127 RAB5CP51148 216 aa11.42□□□□□ -0.58
MKS1-209ENST00000580127 EIF5AP63241 154 aaKnown RBP11.42□□□□□ -0.58
MKS1-209ENST00000580127 RASL11AQ6T310 242 aa11.42□□□□□ -0.58
MKS1-209ENST00000580127 A0A087WYN8 130 aa11.41□□□□□ -0.58
MKS1-209ENST00000580127 PANO1I0J062 215 aa11.41□□□□□ -0.58
MKS1-209ENST00000580127 TRGC1P0CF51 173 aa11.41□□□□□ -0.58
MKS1-209ENST00000580127 NKX2-5P52952 324 aaPredicted RBP11.41□□□□□ -0.58
MKS1-209ENST00000580127 NIT2Q9NQR4 276 aa11.41□□□□□ -0.58
MKS1-209ENST00000580127 HMCN2Q8NDA2 5059 aa11.4□□□□□ -0.58
MKS1-209ENST00000580127 SUMO4Q6EEV6 95 aa11.4□□□□□ -0.58
MKS1-209ENST00000580127 C20orf203Q8NBC4 194 aa11.4□□□□□ -0.58
MKS1-209ENST00000580127 OR2D3Q8NGH3 330 aa11.4□□□□□ -0.58
MKS1-209ENST00000580127 PGLYRP4Q96LB8 373 aa11.4□□□□□ -0.58
MKS1-209ENST00000580127 BIN3Q9NQY0 253 aa11.4□□□□□ -0.58
MKS1-209ENST00000580127 TEX46H3BTG2 121 aa11.39□□□□□ -0.59
MKS1-209ENST00000580127 COTL1Q14019 142 aa11.39□□□□□ -0.59
MKS1-209ENST00000580127 ZNF345Q14585 488 aa11.39□□□□□ -0.59
MKS1-209ENST00000580127 MANBALQ9NQG1 85 aa11.39□□□□□ -0.59
MKS1-209ENST00000580127 KANTRA0A1W2PQU2 76 aa11.38□□□□□ -0.59
MKS1-209ENST00000580127 MT1HL1P0DM35 61 aa11.38□□□□□ -0.59
MKS1-209ENST00000580127 RPS10P46783 165 aaKnown RBP11.38□□□□□ -0.59
MKS1-209ENST00000580127 UBR4Q5T4S7 5183 aa11.38□□□□□ -0.59
MKS1-209ENST00000580127 IGLV4-60A0A075B6I1 120 aa11.37□□□□□ -0.59
MKS1-209ENST00000580127 IFNA1P01562 189 aa11.37□□□□□ -0.59
MKS1-209ENST00000580127 IGLC6P0CF74 106 aa11.37□□□□□ -0.59
MKS1-209ENST00000580127 AMTP48728 403 aa11.37□□□□□ -0.59
MKS1-209ENST00000580127 SPACA4Q8TDM5 124 aa11.37□□□□□ -0.59
MKS1-209ENST00000580127 SMIM12Q96EX1 92 aa11.37□□□□□ -0.59
MKS1-209ENST00000580127 PLAC8Q9NZF1 115 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms