RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 IGLC6P0CF74 106 aa16.65■□□□□ 0.26
NME3-202ENST00000561637 MEF2BQ02080 365 aaPredicted RBP16.65■□□□□ 0.26
NME3-202ENST00000561637 LINC01620Q4KN68 170 aa16.65■□□□□ 0.26
NME3-202ENST00000561637 TOR2AQ5JU69 321 aa16.65■□□□□ 0.26
NME3-202ENST00000561637 EIF5AL1Q6IS14 154 aaKnown RBP16.65■□□□□ 0.26
NME3-202ENST00000561637 Q6ZNX1 250 aa16.65■□□□□ 0.26
NME3-202ENST00000561637 IGKV2D-24A0A075B6R9 120 aa16.64■□□□□ 0.25
NME3-202ENST00000561637 A0A087WX48 190 aa16.64■□□□□ 0.25
NME3-202ENST00000561637 TRBV6-8A0A0A6YYG3 113 aa16.64■□□□□ 0.25
NME3-202ENST00000561637 BCL2P10415 239 aa16.63■□□□□ 0.25
NME3-202ENST00000561637 NTM-AS1Q6ZSK4 140 aa16.63■□□□□ 0.25
NME3-202ENST00000561637 SLC51BQ86UW2 128 aa16.63■□□□□ 0.25
NME3-202ENST00000561637 FER1L6-AS1Q8NA97 138 aa16.63■□□□□ 0.25
NME3-202ENST00000561637 TMEM70Q9BUB7 260 aa16.63■□□□□ 0.25
NME3-202ENST00000561637 MED9Q9NWA0 146 aa16.63■□□□□ 0.25
NME3-202ENST00000561637 HMCN2Q8NDA2 5059 aa16.63■□□□□ 0.25
NME3-202ENST00000561637 hCG_2014768A0A024R1R8 64 aa16.62■□□□□ 0.25
NME3-202ENST00000561637 GNG4P50150 75 aa16.62■□□□□ 0.25
NME3-202ENST00000561637 MPV17L2Q567V2 206 aa16.62■□□□□ 0.25
NME3-202ENST00000561637 AP1S3Q96PC3 154 aa16.62■□□□□ 0.25
NME3-202ENST00000561637 TMEM262E9PQX1 116 aa16.61■□□□□ 0.25
NME3-202ENST00000561637 C9orf62Q8N4C0 152 aa16.61■□□□□ 0.25
NME3-202ENST00000561637 TEX46H3BTG2 121 aa16.6■□□□□ 0.25
NME3-202ENST00000561637 MGPP08493 103 aa16.6■□□□□ 0.25
NME3-202ENST00000561637 C15orf54Q8N8G6 183 aa16.6■□□□□ 0.25
NME3-202ENST00000561637 DAZAP1Q96EP5 407 aaKnown RBP16.6■□□□□ 0.25
NME3-202ENST00000561637 PDE6DO43924 150 aa16.59■□□□□ 0.25
NME3-202ENST00000561637 ENHOQ6UWT2 76 aa16.59■□□□□ 0.25
NME3-202ENST00000561637 Q8N976 141 aa16.59■□□□□ 0.25
NME3-202ENST00000561637 CHCHD7Q9BUK0 85 aa16.59■□□□□ 0.25
NME3-202ENST00000561637 KRTAP29-1A8MX34 341 aaPredicted RBP16.58■□□□□ 0.24
NME3-202ENST00000561637 IFNA1P01562 189 aa16.58■□□□□ 0.24
NME3-202ENST00000561637 SMIM17P0DL12 118 aa16.58■□□□□ 0.24
NME3-202ENST00000561637 SUMO4Q6EEV6 95 aa16.58■□□□□ 0.24
NME3-202ENST00000561637 RMI2Q96E14 147 aa16.58■□□□□ 0.24
NME3-202ENST00000561637 CHCHD5Q9BSY4 110 aa16.58■□□□□ 0.24
NME3-202ENST00000561637 P01737 135 aa16.57■□□□□ 0.24
NME3-202ENST00000561637 RPS20P60866 119 aaKnown RBP16.57■□□□□ 0.24
NME3-202ENST00000561637 ATRAIDQ6UW56 229 aa16.57■□□□□ 0.24
NME3-202ENST00000561637 VAX2Q9UIW0 290 aa16.57■□□□□ 0.24
NME3-202ENST00000561637 M0QY20 66 aa16.56■□□□□ 0.24
NME3-202ENST00000561637 KCNIP4Q6PIL6 250 aa16.56■□□□□ 0.24
NME3-202ENST00000561637 LYZL1Q6UWQ5 148 aa16.56■□□□□ 0.24
NME3-202ENST00000561637 LRP1Q07954 4544 aaKnown RBP16.56■□□□□ 0.24
NME3-202ENST00000561637 GAGE6Q13070 117 aa16.55■□□□□ 0.24
NME3-202ENST00000561637 DEFB104AQ8WTQ1 72 aa16.55■□□□□ 0.24
NME3-202ENST00000561637 COX11Q9Y6N1 276 aa16.55■□□□□ 0.24
NME3-202ENST00000561637 K7EN84 100 aa16.54■□□□□ 0.24
NME3-202ENST00000561637 ANGP03950 147 aaKnown RBP16.54■□□□□ 0.24
NME3-202ENST00000561637 ELOBQ15370 118 aa16.54■□□□□ 0.24
NME3-202ENST00000561637 CLPSL2Q6UWE3 100 aa16.54■□□□□ 0.24
NME3-202ENST00000561637 Q6ZSA8 131 aa16.54■□□□□ 0.24
NME3-202ENST00000561637 AKAP14Q86UN6 197 aa16.54■□□□□ 0.24
NME3-202ENST00000561637 NUDT10Q8NFP7 164 aa16.54■□□□□ 0.24
NME3-202ENST00000561637 SMIM12Q96EX1 92 aa16.54■□□□□ 0.24
NME3-202ENST00000561637 NUDT11Q96G61 164 aa16.54■□□□□ 0.24
NME3-202ENST00000561637 CACNG7P62955 275 aa16.53■□□□□ 0.24
NME3-202ENST00000561637 ALKAL2Q6UX46 152 aa16.53■□□□□ 0.24
NME3-202ENST00000561637 RNASE7Q9H1E1 156 aaKnown RBP16.53■□□□□ 0.24
NME3-202ENST00000561637 NKX2-5P52952 324 aaPredicted RBP16.51■□□□□ 0.23
NME3-202ENST00000561637 RBX1P62877 108 aa16.51■□□□□ 0.23
NME3-202ENST00000561637 OCC1Q8TAD7 63 aa16.51■□□□□ 0.23
NME3-202ENST00000561637 CRPP02741 224 aa16.5■□□□□ 0.23
NME3-202ENST00000561637 Q0VG73 95 aa16.5■□□□□ 0.23
NME3-202ENST00000561637 C1orf43Q9BWL3 253 aa16.5■□□□□ 0.23
NME3-202ENST00000561637 NTF3P20783 257 aa16.49■□□□□ 0.23
NME3-202ENST00000561637 CTRLP40313 264 aa16.49■□□□□ 0.23
NME3-202ENST00000561637 SERTAD4-AS1Q5TG53 156 aa16.48■□□□□ 0.23
NME3-202ENST00000561637 XKRY2A2RUG3 117 aa16.47■□□□□ 0.23
NME3-202ENST00000561637 F2Z2F3 143 aa16.47■□□□□ 0.23
NME3-202ENST00000561637 IQCJQ1A5X6 159 aa16.47■□□□□ 0.23
NME3-202ENST00000561637 LINC00269Q8N2A0 174 aa16.47■□□□□ 0.23
NME3-202ENST00000561637 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.47■□□□□ 0.23
NME3-202ENST00000561637 RPP21Q9H633 154 aaKnown RBP16.47■□□□□ 0.23
NME3-202ENST00000561637 TRBV25-1A0A075B6N4 114 aa16.46■□□□□ 0.23
NME3-202ENST00000561637 HLA-DQA1P01909 254 aa16.46■□□□□ 0.23
NME3-202ENST00000561637 KRTAP26-1Q6PEX3 210 aa16.46■□□□□ 0.23
NME3-202ENST00000561637 RASL11AQ6T310 242 aa16.46■□□□□ 0.23
NME3-202ENST00000561637 DPH3P1Q9H4G8 78 aa16.46■□□□□ 0.23
NME3-202ENST00000561637 FAT3Q8TDW7 4589 aa16.45■□□□□ 0.22
NME3-202ENST00000561637 IGHV1-24A0A0C4DH33 117 aa16.45■□□□□ 0.22
NME3-202ENST00000561637 PLA2G1BP04054 148 aaKnown RBP16.45■□□□□ 0.22
NME3-202ENST00000561637 FOXA3P55318 350 aaPredicted RBP16.45■□□□□ 0.22
NME3-202ENST00000561637 TMEM97Q5BJF2 176 aa16.45■□□□□ 0.22
NME3-202ENST00000561637 SCXQ7RTU7 201 aa16.45■□□□□ 0.22
NME3-202ENST00000561637 GTSF1Q8WW33 167 aa16.45■□□□□ 0.22
NME3-202ENST00000561637 GFRA4Q9GZZ7 299 aa16.45■□□□□ 0.22
NME3-202ENST00000561637 BIN3Q9NQY0 253 aa16.45■□□□□ 0.22
NME3-202ENST00000561637 PRR34Q9NV39 138 aa16.45■□□□□ 0.22
NME3-202ENST00000561637 TRAV26-2A0A0B4J265 109 aa16.44■□□□□ 0.22
NME3-202ENST00000561637 USP17L23D6RBM5 183 aa16.44■□□□□ 0.22
NME3-202ENST00000561637 H7C1H1 209 aa16.44■□□□□ 0.22
NME3-202ENST00000561637 TRGC1P0CF51 173 aa16.44■□□□□ 0.22
NME3-202ENST00000561637 TAGLN2P37802 199 aaKnown RBP16.44■□□□□ 0.22
NME3-202ENST00000561637 TWIST1Q15672 202 aa16.43■□□□□ 0.22
NME3-202ENST00000561637 LINC00528Q8N1L1 170 aa16.43■□□□□ 0.22
NME3-202ENST00000561637 CNFNQ9BYD5 112 aa16.43■□□□□ 0.22
NME3-202ENST00000561637 A0A1B0GVG6 124 aa16.42■□□□□ 0.22
NME3-202ENST00000561637 PKIAP61925 76 aa16.42■□□□□ 0.22
NME3-202ENST00000561637 MIAQ16674 131 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms