RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 DNAJC30Q96LL9 226 aa9.55□□□□□ -0.88
HMBOX1-213ENST00000560269 NIT2Q9NQR4 276 aa9.55□□□□□ -0.88
HMBOX1-213ENST00000560269 Q9UF83 564 aa9.55□□□□□ -0.88
HMBOX1-213ENST00000560269 DNAH7Q8WXX0 4024 aa9.54□□□□□ -0.88
HMBOX1-213ENST00000560269 TRBV6-5A0A0K0K1A5 114 aa9.54□□□□□ -0.88
HMBOX1-213ENST00000560269 PPP1R17O96001 155 aa9.54□□□□□ -0.88
HMBOX1-213ENST00000560269 RPL39LQ96EH5 51 aaKnown RBP9.54□□□□□ -0.88
HMBOX1-213ENST00000560269 PRELID3AQ96N28 172 aa9.54□□□□□ -0.88
HMBOX1-213ENST00000560269 ALKBH7Q9BT30 221 aaPredicted RBP9.54□□□□□ -0.88
HMBOX1-213ENST00000560269 LAMTOR2Q9Y2Q5 125 aa9.54□□□□□ -0.88
HMBOX1-213ENST00000560269 DYNC2H1Q8NCM8 4307 aaKnown RBP9.53□□□□□ -0.88
HMBOX1-213ENST00000560269 A0A0J9YY99 117 aa9.53□□□□□ -0.88
HMBOX1-213ENST00000560269 LOC100131303A0A0U1RQF7 123 aa9.53□□□□□ -0.88
HMBOX1-213ENST00000560269 TNFRSF6BO95407 300 aa9.53□□□□□ -0.88
HMBOX1-213ENST00000560269 NPYP01303 97 aa9.53□□□□□ -0.88
HMBOX1-213ENST00000560269 OR10J3Q5JRS4 329 aa9.53□□□□□ -0.88
HMBOX1-213ENST00000560269 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.53□□□□□ -0.88
HMBOX1-213ENST00000560269 PRSS47A8MTI9 375 aa9.52□□□□□ -0.89
HMBOX1-213ENST00000560269 LINC00694P0DN24 101 aa9.52□□□□□ -0.89
HMBOX1-213ENST00000560269 GYPEP15421 78 aa9.52□□□□□ -0.89
HMBOX1-213ENST00000560269 RPL36AP83881 106 aaKnown RBP9.52□□□□□ -0.89
HMBOX1-213ENST00000560269 RPL36ALQ969Q0 106 aaKnown RBP9.52□□□□□ -0.89
HMBOX1-213ENST00000560269 WWC2-AS2Q96NR7 200 aa9.52□□□□□ -0.89
HMBOX1-213ENST00000560269 TNFRSF18Q9Y5U5 241 aa9.52□□□□□ -0.89
HMBOX1-213ENST00000560269 TRBV7-3A0A075B6L6 115 aa9.51□□□□□ -0.89
HMBOX1-213ENST00000560269 SRIP30626 198 aa9.51□□□□□ -0.89
HMBOX1-213ENST00000560269 CEMP1Q6PRD7 247 aaPredicted RBP9.51□□□□□ -0.89
HMBOX1-213ENST00000560269 ZNRF2Q8NHG8 242 aa9.51□□□□□ -0.89
HMBOX1-213ENST00000560269 C20orf78Q9BR46 151 aa9.51□□□□□ -0.89
HMBOX1-213ENST00000560269 ST20Q9HBF5 79 aa9.51□□□□□ -0.89
HMBOX1-213ENST00000560269 GAGE12JA6NER3 117 aa9.5□□□□□ -0.89
HMBOX1-213ENST00000560269 NUPR2A6NF83 97 aa9.5□□□□□ -0.89
HMBOX1-213ENST00000560269 POLR2KP53803 58 aaKnown RBP9.5□□□□□ -0.89
HMBOX1-213ENST00000560269 UBE2D3P61077 147 aa9.5□□□□□ -0.89
HMBOX1-213ENST00000560269 SUMO2P61956 95 aaKnown RBP9.5□□□□□ -0.89
HMBOX1-213ENST00000560269 UBE2D2P62837 147 aa9.5□□□□□ -0.89
HMBOX1-213ENST00000560269 RPL32P62910 135 aaKnown RBP9.5□□□□□ -0.89
HMBOX1-213ENST00000560269 GAGE1Q13065 139 aa9.5□□□□□ -0.89
HMBOX1-213ENST00000560269 GAGE4Q13068 117 aa9.5□□□□□ -0.89
HMBOX1-213ENST00000560269 GAGE5Q13069 117 aa9.5□□□□□ -0.89
HMBOX1-213ENST00000560269 GAGE13Q4V321 117 aa9.5□□□□□ -0.89
HMBOX1-213ENST00000560269 ICOSQ9Y6W8 199 aa9.5□□□□□ -0.89
HMBOX1-213ENST00000560269 A0A096LPF7 62 aa9.49□□□□□ -0.89
HMBOX1-213ENST00000560269 SDHAF1A6NFY7 115 aa9.49□□□□□ -0.89
HMBOX1-213ENST00000560269 MRPL23Q16540 153 aaKnown RBP9.49□□□□□ -0.89
HMBOX1-213ENST00000560269 SH2D6Q7Z4S9 175 aa9.49□□□□□ -0.89
HMBOX1-213ENST00000560269 C15orf53Q8NAA6 179 aa9.49□□□□□ -0.89
HMBOX1-213ENST00000560269 MUC7Q8TAX7 377 aa9.49□□□□□ -0.89
HMBOX1-213ENST00000560269 TMEM70Q9BUB7 260 aa9.49□□□□□ -0.89
HMBOX1-213ENST00000560269 TRBV27A0A0K0K1C4 114 aa9.48□□□□□ -0.89
HMBOX1-213ENST00000560269 IGLL5B9A064 214 aa9.48□□□□□ -0.89
HMBOX1-213ENST00000560269 DAZ4Q86SG3 579 aaKnown RBP9.48□□□□□ -0.89
HMBOX1-213ENST00000560269 C18orf32Q8TCD1 76 aa9.48□□□□□ -0.89
HMBOX1-213ENST00000560269 MAP1LC3AQ9H492 121 aa9.48□□□□□ -0.89
HMBOX1-213ENST00000560269 DAZ3Q9NR90 486 aaKnown RBP9.48□□□□□ -0.89
HMBOX1-213ENST00000560269 IGLV2-18A0A075B6J9 118 aa9.47□□□□□ -0.89
HMBOX1-213ENST00000560269 C1orf196B1AJZ1 125 aa9.47□□□□□ -0.89
HMBOX1-213ENST00000560269 VCYO14598 125 aa9.47□□□□□ -0.89
HMBOX1-213ENST00000560269 ATP6V0E2Q8NHE4 81 aa9.47□□□□□ -0.89
HMBOX1-213ENST00000560269 SMIM2Q9BVW6 85 aa9.47□□□□□ -0.89
HMBOX1-213ENST00000560269 KLK5Q9Y337 293 aaPredicted RBP9.47□□□□□ -0.89
HMBOX1-213ENST00000560269 CSMD3Q7Z407 3707 aa9.47□□□□□ -0.89
HMBOX1-213ENST00000560269 STARD9Q9P2P6 4700 aa9.46□□□□□ -0.89
HMBOX1-213ENST00000560269 NUDT3O95989 172 aa9.46□□□□□ -0.9
HMBOX1-213ENST00000560269 NEGR1Q7Z3B1 354 aa9.46□□□□□ -0.9
HMBOX1-213ENST00000560269 NXT2Q9NPJ8 142 aaKnown RBP9.46□□□□□ -0.9
HMBOX1-213ENST00000560269 LOC389332A0A1B0GUA5 103 aa9.45□□□□□ -0.9
HMBOX1-213ENST00000560269 I3L3M4 83 aa9.45□□□□□ -0.9
HMBOX1-213ENST00000560269 HIST1H2BKO60814 126 aa9.45□□□□□ -0.9
HMBOX1-213ENST00000560269 HIST1H2BJP06899 126 aa9.45□□□□□ -0.9
HMBOX1-213ENST00000560269 PMCHP20382 165 aa9.45□□□□□ -0.9
HMBOX1-213ENST00000560269 HIST1H2BOP23527 126 aa9.45□□□□□ -0.9
HMBOX1-213ENST00000560269 HIST1H2BBP33778 126 aa9.45□□□□□ -0.9
HMBOX1-213ENST00000560269 TCTAP57738 103 aa9.45□□□□□ -0.9
HMBOX1-213ENST00000560269 HIST1H2BDP58876 126 aa9.45□□□□□ -0.9
HMBOX1-213ENST00000560269 HIST1H2BCP62807 126 aa9.45□□□□□ -0.9
HMBOX1-213ENST00000560269 Q0VG73 95 aa9.45□□□□□ -0.9
HMBOX1-213ENST00000560269 HIST2H2BEQ16778 126 aa9.45□□□□□ -0.9
HMBOX1-213ENST00000560269 IQCJQ1A5X6 159 aa9.45□□□□□ -0.9
HMBOX1-213ENST00000560269 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.45□□□□□ -0.9
HMBOX1-213ENST00000560269 Q8N8P6 123 aa9.45□□□□□ -0.9
HMBOX1-213ENST00000560269 HIST1H2BHQ93079 126 aa9.45□□□□□ -0.9
HMBOX1-213ENST00000560269 HIST1H2BNQ99877 126 aa9.45□□□□□ -0.9
HMBOX1-213ENST00000560269 HIST1H2BMQ99879 126 aa9.45□□□□□ -0.9
HMBOX1-213ENST00000560269 APLNQ9ULZ1 77 aa9.45□□□□□ -0.9
HMBOX1-213ENST00000560269 PLECQ15149 4684 aaKnown RBP9.44□□□□□ -0.9
HMBOX1-213ENST00000560269 IGHV3-38A0A0C4DH36 116 aa9.44□□□□□ -0.9
HMBOX1-213ENST00000560269 TIRAPP58753 221 aa9.44□□□□□ -0.9
HMBOX1-213ENST00000560269 GTSF1LQ9H1H1 148 aa9.44□□□□□ -0.9
HMBOX1-213ENST00000560269 LINC01546A6NGU7 62 aa9.43□□□□□ -0.9
HMBOX1-213ENST00000560269 TCAPO15273 167 aa9.43□□□□□ -0.9
HMBOX1-213ENST00000560269 TSHBP01222 138 aa9.43□□□□□ -0.9
HMBOX1-213ENST00000560269 IFI27P40305 119 aaPredicted RBP9.43□□□□□ -0.9
HMBOX1-213ENST00000560269 COTL1Q14019 142 aa9.43□□□□□ -0.9
HMBOX1-213ENST00000560269 TMEM97Q5BJF2 176 aa9.43□□□□□ -0.9
HMBOX1-213ENST00000560269 ZFAND6Q6FIF0 208 aa9.43□□□□□ -0.9
HMBOX1-213ENST00000560269 PRSS3P2Q8NHM4 247 aa9.43□□□□□ -0.9
HMBOX1-213ENST00000560269 KIR2DL4Q99706 377 aa9.43□□□□□ -0.9
HMBOX1-213ENST00000560269 K7EMI3 77 aa9.42□□□□□ -0.9
HMBOX1-213ENST00000560269 RAB5BP61020 215 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 213.7 ms