RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 NPYP01303 97 aa12.68□□□□□ -0.38
CLPX-203ENST00000558958 RHOHQ15669 191 aa12.68□□□□□ -0.38
CLPX-203ENST00000558958 OR10J3Q5JRS4 329 aa12.68□□□□□ -0.38
CLPX-203ENST00000558958 DEFB131BA0A096LNP1 70 aa12.67□□□□□ -0.38
CLPX-203ENST00000558958 NEXN-AS1Q8NBZ9 246 aa12.67□□□□□ -0.38
CLPX-203ENST00000558958 VSIG2Q96IQ7 327 aa12.67□□□□□ -0.38
CLPX-203ENST00000558958 PRADC1Q9BSG0 188 aa12.67□□□□□ -0.38
CLPX-203ENST00000558958 TRAV26-1A0A087WT03 109 aa12.66□□□□□ -0.38
CLPX-203ENST00000558958 TRAV10A0A0B4J240 114 aa12.66□□□□□ -0.38
CLPX-203ENST00000558958 TRBV6-5A0A0K0K1A5 114 aa12.66□□□□□ -0.38
CLPX-203ENST00000558958 C1orf196B1AJZ1 125 aa12.66□□□□□ -0.38
CLPX-203ENST00000558958 PAX4O43316 350 aa12.66□□□□□ -0.38
CLPX-203ENST00000558958 LOC100131303A0A0U1RQF7 123 aa12.65□□□□□ -0.38
CLPX-203ENST00000558958 DNAJC30Q96LL9 226 aa12.65□□□□□ -0.38
CLPX-203ENST00000558958 A0A0J9YY99 117 aa12.65□□□□□ -0.38
CLPX-203ENST00000558958 C20orf78Q9BR46 151 aa12.65□□□□□ -0.38
CLPX-203ENST00000558958 ST20Q9HBF5 79 aa12.65□□□□□ -0.38
CLPX-203ENST00000558958 TNFRSF18Q9Y5U5 241 aa12.65□□□□□ -0.38
CLPX-203ENST00000558958 TGP01266 2768 aa12.65□□□□□ -0.39
CLPX-203ENST00000558958 TRBV7-3A0A075B6L6 115 aa12.64□□□□□ -0.39
CLPX-203ENST00000558958 HIST1H2BKO60814 126 aa12.64□□□□□ -0.39
CLPX-203ENST00000558958 HIST1H2BJP06899 126 aa12.64□□□□□ -0.39
CLPX-203ENST00000558958 GYPEP15421 78 aa12.64□□□□□ -0.39
CLPX-203ENST00000558958 HIST1H2BOP23527 126 aa12.64□□□□□ -0.39
CLPX-203ENST00000558958 HIST1H2BBP33778 126 aa12.64□□□□□ -0.39
CLPX-203ENST00000558958 HIST1H2BDP58876 126 aa12.64□□□□□ -0.39
CLPX-203ENST00000558958 SUMO2P61956 95 aaKnown RBP12.64□□□□□ -0.39
CLPX-203ENST00000558958 HIST1H2BCP62807 126 aa12.64□□□□□ -0.39
CLPX-203ENST00000558958 RPL36AP83881 106 aaKnown RBP12.64□□□□□ -0.39
CLPX-203ENST00000558958 HIST2H2BEQ16778 126 aa12.64□□□□□ -0.39
CLPX-203ENST00000558958 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.64□□□□□ -0.39
CLPX-203ENST00000558958 C18orf32Q8TCD1 76 aa12.64□□□□□ -0.39
CLPX-203ENST00000558958 PHLDA1Q8WV24 401 aaPredicted RBP12.64□□□□□ -0.39
CLPX-203ENST00000558958 HIST1H2BHQ93079 126 aa12.64□□□□□ -0.39
CLPX-203ENST00000558958 RPL36ALQ969Q0 106 aaKnown RBP12.64□□□□□ -0.39
CLPX-203ENST00000558958 HIST1H2BNQ99877 126 aa12.64□□□□□ -0.39
CLPX-203ENST00000558958 HIST1H2BMQ99879 126 aa12.64□□□□□ -0.39
CLPX-203ENST00000558958 GAGE12JA6NER3 117 aa12.63□□□□□ -0.39
CLPX-203ENST00000558958 PRSS47A8MTI9 375 aa12.63□□□□□ -0.39
CLPX-203ENST00000558958 GAGE1Q13065 139 aa12.63□□□□□ -0.39
CLPX-203ENST00000558958 GAGE4Q13068 117 aa12.63□□□□□ -0.39
CLPX-203ENST00000558958 GAGE5Q13069 117 aa12.63□□□□□ -0.39
CLPX-203ENST00000558958 GAGE13Q4V321 117 aa12.63□□□□□ -0.39
CLPX-203ENST00000558958 ZNRF2Q8NHG8 242 aa12.63□□□□□ -0.39
CLPX-203ENST00000558958 MAP1LC3AQ9H492 121 aa12.63□□□□□ -0.39
CLPX-203ENST00000558958 SDHAF1A6NFY7 115 aa12.62□□□□□ -0.39
CLPX-203ENST00000558958 H3BNG1 76 aa12.62□□□□□ -0.39
CLPX-203ENST00000558958 LINC00694P0DN24 101 aa12.62□□□□□ -0.39
CLPX-203ENST00000558958 POLR2KP53803 58 aaKnown RBP12.62□□□□□ -0.39
CLPX-203ENST00000558958 TMEM70Q9BUB7 260 aa12.62□□□□□ -0.39
CLPX-203ENST00000558958 LOC389332A0A1B0GUA5 103 aa12.61□□□□□ -0.39
CLPX-203ENST00000558958 UBE2D3P61077 147 aa12.61□□□□□ -0.39
CLPX-203ENST00000558958 UBE2D2P62837 147 aa12.61□□□□□ -0.39
CLPX-203ENST00000558958 RPL32P62910 135 aaKnown RBP12.61□□□□□ -0.39
CLPX-203ENST00000558958 IQCJQ1A5X6 159 aa12.61□□□□□ -0.39
CLPX-203ENST00000558958 RAB5BP61020 215 aa12.6□□□□□ -0.39
CLPX-203ENST00000558958 Q0VG73 95 aa12.6□□□□□ -0.39
CLPX-203ENST00000558958 SMIM2Q9BVW6 85 aa12.6□□□□□ -0.39
CLPX-203ENST00000558958 DYNC2H1Q8NCM8 4307 aaKnown RBP12.6□□□□□ -0.39
CLPX-203ENST00000558958 TRBV27A0A0K0K1C4 114 aa12.59□□□□□ -0.39
CLPX-203ENST00000558958 IGLV2-18A0A075B6J9 118 aa12.59□□□□□ -0.39
CLPX-203ENST00000558958 VCYO14598 125 aa12.59□□□□□ -0.39
CLPX-203ENST00000558958 IFI27P40305 119 aaPredicted RBP12.59□□□□□ -0.39
CLPX-203ENST00000558958 MRPL23Q16540 153 aaKnown RBP12.59□□□□□ -0.39
CLPX-203ENST00000558958 NEGR1Q7Z3B1 354 aa12.59□□□□□ -0.39
CLPX-203ENST00000558958 ICOSQ9Y6W8 199 aa12.59□□□□□ -0.39
CLPX-203ENST00000558958 PMCHP20382 165 aa12.58□□□□□ -0.4
CLPX-203ENST00000558958 DAZ4Q86SG3 579 aaKnown RBP12.58□□□□□ -0.4
CLPX-203ENST00000558958 Q8N8P6 123 aa12.58□□□□□ -0.4
CLPX-203ENST00000558958 PRSS3P2Q8NHM4 247 aa12.58□□□□□ -0.4
CLPX-203ENST00000558958 NXT2Q9NPJ8 142 aaKnown RBP12.58□□□□□ -0.4
CLPX-203ENST00000558958 DAZ3Q9NR90 486 aaKnown RBP12.58□□□□□ -0.4
CLPX-203ENST00000558958 A0A096LPF7 62 aa12.57□□□□□ -0.4
CLPX-203ENST00000558958 I3L3M4 83 aa12.57□□□□□ -0.4
CLPX-203ENST00000558958 IGHV3-38A0A0C4DH36 116 aa12.56□□□□□ -0.4
CLPX-203ENST00000558958 CEMP1Q6PRD7 247 aaPredicted RBP12.56□□□□□ -0.4
CLPX-203ENST00000558958 BAGE3Q86Y29 109 aa12.56□□□□□ -0.4
CLPX-203ENST00000558958 ATP6V0E2Q8NHE4 81 aa12.56□□□□□ -0.4
CLPX-203ENST00000558958 URB1-AS1Q96HZ7 61 aa12.56□□□□□ -0.4
CLPX-203ENST00000558958 CSMD3Q7Z407 3707 aa12.56□□□□□ -0.4
CLPX-203ENST00000558958 SH2D6Q7Z4S9 175 aa12.55□□□□□ -0.4
CLPX-203ENST00000558958 NIT1Q86X76 327 aa12.55□□□□□ -0.4
CLPX-203ENST00000558958 KIR2DL4Q99706 377 aa12.55□□□□□ -0.4
CLPX-203ENST00000558958 LINC01546A6NGU7 62 aa12.54□□□□□ -0.4
CLPX-203ENST00000558958 IGLL5B9A064 214 aa12.54□□□□□ -0.4
CLPX-203ENST00000558958 NUDT3O95989 172 aa12.54□□□□□ -0.4
CLPX-203ENST00000558958 LINC00614P0C842 121 aa12.54□□□□□ -0.4
CLPX-203ENST00000558958 C15orf53Q8NAA6 179 aa12.54□□□□□ -0.4
CLPX-203ENST00000558958 NUPR2A6NF83 97 aa12.53□□□□□ -0.4
CLPX-203ENST00000558958 TCAPO15273 167 aa12.53□□□□□ -0.4
CLPX-203ENST00000558958 TSHBP01222 138 aa12.53□□□□□ -0.4
CLPX-203ENST00000558958 LINC00310P59036 64 aa12.53□□□□□ -0.4
CLPX-203ENST00000558958 COA6Q5JTJ3 125 aaKnown RBP12.53□□□□□ -0.4
CLPX-203ENST00000558958 FA2HQ7L5A8 372 aa12.53□□□□□ -0.4
CLPX-203ENST00000558958 DEFB104AQ8WTQ1 72 aa12.53□□□□□ -0.4
CLPX-203ENST00000558958 NDUFA6P56556 154 aa12.53□□□□□ -0.4
CLPX-203ENST00000558958 COTL1Q14019 142 aa12.53□□□□□ -0.4
CLPX-203ENST00000558958 RNASEKQ6P5S7 137 aaKnown RBP12.53□□□□□ -0.4
CLPX-203ENST00000558958 WWC2-AS2Q96NR7 200 aa12.53□□□□□ -0.4
CLPX-203ENST00000558958 GTSF1LQ9H1H1 148 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms