RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 TSKUQ8WUA8 353 aa7.52□□□□□ -1.2
NPIPB3-210ENST00000542817 MSRB1Q9NZV6 116 aa7.52□□□□□ -1.2
NPIPB3-210ENST00000542817 PAM16Q9Y3D7 125 aa7.52□□□□□ -1.2
NPIPB3-210ENST00000542817 COX11Q9Y6N1 276 aa7.52□□□□□ -1.2
NPIPB3-210ENST00000542817 RYR2Q92736 4967 aa7.52□□□□□ -1.21
NPIPB3-210ENST00000542817 HYDINQ4G0P3 5121 aa7.52□□□□□ -1.21
NPIPB3-210ENST00000542817 SMIM27A0A1W2PRY6 76 aa7.52□□□□□ -1.21
NPIPB3-210ENST00000542817 CCL25O15444 150 aa7.52□□□□□ -1.21
NPIPB3-210ENST00000542817 RS1O15537 224 aa7.52□□□□□ -1.21
NPIPB3-210ENST00000542817 S100A4P26447 101 aaKnown RBP7.52□□□□□ -1.21
NPIPB3-210ENST00000542817 HNRNPA3P51991 378 aaKnown RBP7.52□□□□□ -1.21
NPIPB3-210ENST00000542817 ZNF876PQ49A33 203 aa7.52□□□□□ -1.21
NPIPB3-210ENST00000542817 PIK3CD-AS1Q5SR53 167 aa7.52□□□□□ -1.21
NPIPB3-210ENST00000542817 LYZL1Q6UWQ5 148 aa7.52□□□□□ -1.21
NPIPB3-210ENST00000542817 STPG4Q8N801 248 aa7.52□□□□□ -1.21
NPIPB3-210ENST00000542817 DNAH6Q9C0G6 4158 aa7.51□□□□□ -1.21
NPIPB3-210ENST00000542817 FAM231BA6NCW3 169 aa7.51□□□□□ -1.21
NPIPB3-210ENST00000542817 A8MWL6 223 aa7.51□□□□□ -1.21
NPIPB3-210ENST00000542817 LINC00315P59091 139 aa7.51□□□□□ -1.21
NPIPB3-210ENST00000542817 DAD1P61803 113 aa7.51□□□□□ -1.21
NPIPB3-210ENST00000542817 CFAP126Q5VTH2 177 aa7.51□□□□□ -1.21
NPIPB3-210ENST00000542817 TMEM136Q6ZRR5 245 aa7.51□□□□□ -1.21
NPIPB3-210ENST00000542817 NUP35Q8NFH5 326 aa7.51□□□□□ -1.21
NPIPB3-210ENST00000542817 ZNF479Q96JC4 524 aa7.51□□□□□ -1.21
NPIPB3-210ENST00000542817 WWC2-AS2Q96NR7 200 aa7.51□□□□□ -1.21
NPIPB3-210ENST00000542817 GFRA4Q9GZZ7 299 aa7.51□□□□□ -1.21
NPIPB3-210ENST00000542817 KIF25-AS1Q9Y6Z4 181 aa7.51□□□□□ -1.21
NPIPB3-210ENST00000542817 RYR3Q15413 4870 aa7.5□□□□□ -1.21
NPIPB3-210ENST00000542817 TRAV9-2A0A087WT02 112 aa7.5□□□□□ -1.21
NPIPB3-210ENST00000542817 TEX48A0A1B0GUV7 120 aa7.5□□□□□ -1.21
NPIPB3-210ENST00000542817 HIGD1CA8MV81 97 aa7.5□□□□□ -1.21
NPIPB3-210ENST00000542817 CRYGDP07320 174 aa7.5□□□□□ -1.21
NPIPB3-210ENST00000542817 FHL2Q14192 279 aa7.5□□□□□ -1.21
NPIPB3-210ENST00000542817 Q6ZN92 141 aa7.5□□□□□ -1.21
NPIPB3-210ENST00000542817 Q6ZSN1 163 aa7.5□□□□□ -1.21
NPIPB3-210ENST00000542817 NIT1Q86X76 327 aa7.5□□□□□ -1.21
NPIPB3-210ENST00000542817 PHLDA3Q9Y5J5 127 aa7.5□□□□□ -1.21
NPIPB3-210ENST00000542817 TRAV4A0A0B4J268 109 aa7.49□□□□□ -1.21
NPIPB3-210ENST00000542817 F2Z2F3 143 aa7.49□□□□□ -1.21
NPIPB3-210ENST00000542817 M0R381 172 aa7.49□□□□□ -1.21
NPIPB3-210ENST00000542817 IGHV3-53P01767 116 aa7.49□□□□□ -1.21
NPIPB3-210ENST00000542817 C3orf79P0CE67 100 aa7.49□□□□□ -1.21
NPIPB3-210ENST00000542817 SMIM15Q7Z3B0 74 aa7.49□□□□□ -1.21
NPIPB3-210ENST00000542817 PHLDA1Q8WV24 401 aaPredicted RBP7.49□□□□□ -1.21
NPIPB3-210ENST00000542817 BORCS7Q96B45 105 aa7.49□□□□□ -1.21
NPIPB3-210ENST00000542817 PGLYRP4Q96LB8 373 aa7.49□□□□□ -1.21
NPIPB3-210ENST00000542817 ALKBH7Q9BT30 221 aaPredicted RBP7.49□□□□□ -1.21
NPIPB3-210ENST00000542817 TPPP3Q9BW30 176 aa7.49□□□□□ -1.21
NPIPB3-210ENST00000542817 DNAH2Q9P225 4427 aa7.49□□□□□ -1.21
NPIPB3-210ENST00000542817 TRGV2A0A075B6R0 118 aa7.48□□□□□ -1.21
NPIPB3-210ENST00000542817 DEFB131BA0A096LNP1 70 aa7.48□□□□□ -1.21
NPIPB3-210ENST00000542817 NTF3P20783 257 aa7.48□□□□□ -1.21
NPIPB3-210ENST00000542817 AMTP48728 403 aa7.48□□□□□ -1.21
NPIPB3-210ENST00000542817 KRTDAPP60985 99 aa7.48□□□□□ -1.21
NPIPB3-210ENST00000542817 MUC7Q8TAX7 377 aa7.48□□□□□ -1.21
NPIPB3-210ENST00000542817 VSIG2Q96IQ7 327 aa7.48□□□□□ -1.21
NPIPB3-210ENST00000542817 Q9UF83 564 aa7.48□□□□□ -1.21
NPIPB3-210ENST00000542817 TRAV10A0A0B4J240 114 aa7.47□□□□□ -1.21
NPIPB3-210ENST00000542817 A0A1B0GXF2 115 aa7.47□□□□□ -1.21
NPIPB3-210ENST00000542817 ATP5G1P05496 136 aa7.47□□□□□ -1.21
NPIPB3-210ENST00000542817 CACNG7P62955 275 aa7.47□□□□□ -1.21
NPIPB3-210ENST00000542817 BATFQ16520 125 aa7.47□□□□□ -1.21
NPIPB3-210ENST00000542817 ST20Q9HBF5 79 aa7.47□□□□□ -1.21
NPIPB3-210ENST00000542817 NAT8BQ9UHF3 227 aa7.47□□□□□ -1.21
NPIPB3-210ENST00000542817 A0A087WWL8 130 aa7.46□□□□□ -1.22
NPIPB3-210ENST00000542817 IGHV3-73A0A0B4J1V6 119 aa7.46□□□□□ -1.22
NPIPB3-210ENST00000542817 A8MWV9 139 aa7.46□□□□□ -1.22
NPIPB3-210ENST00000542817 GATA1P15976 413 aaPredicted RBP7.46□□□□□ -1.22
NPIPB3-210ENST00000542817 PMCHP20382 165 aa7.46□□□□□ -1.22
NPIPB3-210ENST00000542817 EVI2AP22794 236 aa7.46□□□□□ -1.22
NPIPB3-210ENST00000542817 C21orf62-AS1Q17RA5 79 aa7.46□□□□□ -1.22
NPIPB3-210ENST00000542817 SPANXN1Q5VSR9 72 aa7.46□□□□□ -1.22
NPIPB3-210ENST00000542817 ZFAND6Q6FIF0 208 aa7.46□□□□□ -1.22
NPIPB3-210ENST00000542817 CEMP1Q6PRD7 247 aaPredicted RBP7.46□□□□□ -1.22
NPIPB3-210ENST00000542817 ZFP2Q6ZN57 461 aa7.46□□□□□ -1.22
NPIPB3-210ENST00000542817 ATP5L2Q7Z4Y8 100 aa7.46□□□□□ -1.22
NPIPB3-210ENST00000542817 C14orf178Q8N769 122 aaPredicted RBP7.46□□□□□ -1.22
NPIPB3-210ENST00000542817 SYT8Q8NBV8 401 aa7.46□□□□□ -1.22
NPIPB3-210ENST00000542817 OR4C5Q8NGB2 326 aa7.46□□□□□ -1.22
NPIPB3-210ENST00000542817 A0A1B0GUT8 65 aa7.45□□□□□ -1.22
NPIPB3-210ENST00000542817 APCSP02743 223 aa7.45□□□□□ -1.22
NPIPB3-210ENST00000542817 HTN3P15516 51 aa7.45□□□□□ -1.22
NPIPB3-210ENST00000542817 CRYBA4P53673 196 aa7.45□□□□□ -1.22
NPIPB3-210ENST00000542817 CHTOPQ9Y3Y2 248 aaKnown RBP7.45□□□□□ -1.22
NPIPB3-210ENST00000542817 DNAH10Q8IVF4 4471 aa7.44□□□□□ -1.22
NPIPB3-210ENST00000542817 TRAV26-1A0A087WT03 109 aa7.44□□□□□ -1.22
NPIPB3-210ENST00000542817 F5H768 121 aa7.44□□□□□ -1.22
NPIPB3-210ENST00000542817 TWIST1Q15672 202 aa7.44□□□□□ -1.22
NPIPB3-210ENST00000542817 CASC10Q5T4H9 136 aa7.44□□□□□ -1.22
NPIPB3-210ENST00000542817 SLC25A29Q8N8R3 303 aa7.44□□□□□ -1.22
NPIPB3-210ENST00000542817 GATD1Q8NB37 220 aa7.44□□□□□ -1.22
NPIPB3-210ENST00000542817 C18orf32Q8TCD1 76 aa7.44□□□□□ -1.22
NPIPB3-210ENST00000542817 RNF185Q96GF1 192 aa7.44□□□□□ -1.22
NPIPB3-210ENST00000542817 PMCHL2Q9BQD1 86 aa7.44□□□□□ -1.22
NPIPB3-210ENST00000542817 HHLA3Q9XRX5 114 aa7.44□□□□□ -1.22
NPIPB3-210ENST00000542817 LOC100131303A0A0U1RQF7 123 aa7.43□□□□□ -1.22
NPIPB3-210ENST00000542817 GAS8-AS1O95177 125 aa7.43□□□□□ -1.22
NPIPB3-210ENST00000542817 LINC00694P0DN24 101 aa7.43□□□□□ -1.22
NPIPB3-210ENST00000542817 SRIP30626 198 aa7.43□□□□□ -1.22
NPIPB3-210ENST00000542817 CHCHD1Q96BP2 118 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms