RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 NEXN-AS1Q8NBZ9 246 aa17.31■□□□□ 0.36
LDLRAD3-203ENST00000528989 OR10J3Q5JRS4 329 aa17.31■□□□□ 0.36
LDLRAD3-203ENST00000528989 DEFB104AQ8WTQ1 72 aa17.31■□□□□ 0.36
LDLRAD3-203ENST00000528989 NIT2Q9NQR4 276 aa17.31■□□□□ 0.36
LDLRAD3-203ENST00000528989 H7C1H1 209 aa17.3■□□□□ 0.36
LDLRAD3-203ENST00000528989 PAX4O43316 350 aa17.3■□□□□ 0.36
LDLRAD3-203ENST00000528989 RHOHQ15669 191 aa17.29■□□□□ 0.36
LDLRAD3-203ENST00000528989 IQCJQ1A5X6 159 aa17.29■□□□□ 0.36
LDLRAD3-203ENST00000528989 ZNRF2Q8NHG8 242 aa17.29■□□□□ 0.36
LDLRAD3-203ENST00000528989 LOC389332A0A1B0GUA5 103 aa17.28■□□□□ 0.36
LDLRAD3-203ENST00000528989 GAGE12JA6NER3 117 aa17.28■□□□□ 0.36
LDLRAD3-203ENST00000528989 GAGE1Q13065 139 aa17.28■□□□□ 0.36
LDLRAD3-203ENST00000528989 GAGE4Q13068 117 aa17.28■□□□□ 0.36
LDLRAD3-203ENST00000528989 GAGE5Q13069 117 aa17.28■□□□□ 0.36
LDLRAD3-203ENST00000528989 GAGE13Q4V321 117 aa17.28■□□□□ 0.36
LDLRAD3-203ENST00000528989 HIST1H2BKO60814 126 aa17.27■□□□□ 0.36
LDLRAD3-203ENST00000528989 HIST1H2BJP06899 126 aa17.27■□□□□ 0.36
LDLRAD3-203ENST00000528989 GYPEP15421 78 aa17.27■□□□□ 0.36
LDLRAD3-203ENST00000528989 HIST1H2BOP23527 126 aa17.27■□□□□ 0.36
LDLRAD3-203ENST00000528989 HIST1H2BBP33778 126 aa17.27■□□□□ 0.36
LDLRAD3-203ENST00000528989 HIST1H2BDP58876 126 aa17.27■□□□□ 0.36
LDLRAD3-203ENST00000528989 HIST1H2BCP62807 126 aa17.27■□□□□ 0.36
LDLRAD3-203ENST00000528989 HIST2H2BEQ16778 126 aa17.27■□□□□ 0.36
LDLRAD3-203ENST00000528989 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.27■□□□□ 0.36
LDLRAD3-203ENST00000528989 NEGR1Q7Z3B1 354 aa17.27■□□□□ 0.36
LDLRAD3-203ENST00000528989 HIST1H2BHQ93079 126 aa17.27■□□□□ 0.36
LDLRAD3-203ENST00000528989 HIST1H2BNQ99877 126 aa17.27■□□□□ 0.36
LDLRAD3-203ENST00000528989 HIST1H2BMQ99879 126 aa17.27■□□□□ 0.36
LDLRAD3-203ENST00000528989 PRADC1Q9BSG0 188 aa17.27■□□□□ 0.36
LDLRAD3-203ENST00000528989 C1orf196B1AJZ1 125 aa17.27■□□□□ 0.35
LDLRAD3-203ENST00000528989 C18orf32Q8TCD1 76 aa17.27■□□□□ 0.35
LDLRAD3-203ENST00000528989 PHLDA1Q8WV24 401 aaPredicted RBP17.27■□□□□ 0.35
LDLRAD3-203ENST00000528989 TRAV10A0A0B4J240 114 aa17.26■□□□□ 0.35
LDLRAD3-203ENST00000528989 TNFRSF18Q9Y5U5 241 aa17.26■□□□□ 0.35
LDLRAD3-203ENST00000528989 TRBV10-1A0A0K0K1A3 114 aa17.25■□□□□ 0.35
LDLRAD3-203ENST00000528989 SUMO2P61956 95 aaKnown RBP17.25■□□□□ 0.35
LDLRAD3-203ENST00000528989 ST20Q9HBF5 79 aa17.25■□□□□ 0.35
LDLRAD3-203ENST00000528989 TRBV7-3A0A075B6L6 115 aa17.24■□□□□ 0.35
LDLRAD3-203ENST00000528989 SDHAF1A6NFY7 115 aa17.24■□□□□ 0.35
LDLRAD3-203ENST00000528989 CSMD3Q7Z407 3707 aa17.24■□□□□ 0.35
LDLRAD3-203ENST00000528989 A0A096LPF7 62 aa17.24■□□□□ 0.35
LDLRAD3-203ENST00000528989 IGHV3-38A0A0C4DH36 116 aa17.24■□□□□ 0.35
LDLRAD3-203ENST00000528989 LAMTOR2Q9Y2Q5 125 aa17.24■□□□□ 0.35
LDLRAD3-203ENST00000528989 TRBV6-5A0A0K0K1A5 114 aa17.23■□□□□ 0.35
LDLRAD3-203ENST00000528989 TMEM70Q9BUB7 260 aa17.23■□□□□ 0.35
LDLRAD3-203ENST00000528989 PPP1R17O96001 155 aa17.22■□□□□ 0.35
LDLRAD3-203ENST00000528989 IFI27P40305 119 aaPredicted RBP17.22■□□□□ 0.35
LDLRAD3-203ENST00000528989 POLR2KP53803 58 aaKnown RBP17.22■□□□□ 0.35
LDLRAD3-203ENST00000528989 RPL36AP83881 106 aaKnown RBP17.22■□□□□ 0.35
LDLRAD3-203ENST00000528989 RPL36ALQ969Q0 106 aaKnown RBP17.22■□□□□ 0.35
LDLRAD3-203ENST00000528989 DNAH7Q8WXX0 4024 aa17.22■□□□□ 0.35
LDLRAD3-203ENST00000528989 C20orf78Q9BR46 151 aa17.22■□□□□ 0.35
LDLRAD3-203ENST00000528989 MAP1LC3AQ9H492 121 aa17.22■□□□□ 0.35
LDLRAD3-203ENST00000528989 DNAJC30Q96LL9 226 aa17.21■□□□□ 0.35
LDLRAD3-203ENST00000528989 UBE2D3P61077 147 aa17.2■□□□□ 0.34
LDLRAD3-203ENST00000528989 UBE2D2P62837 147 aa17.2■□□□□ 0.34
LDLRAD3-203ENST00000528989 LINC00694P0DN24 101 aa17.19■□□□□ 0.34
LDLRAD3-203ENST00000528989 URB1-AS1Q96HZ7 61 aa17.19■□□□□ 0.34
LDLRAD3-203ENST00000528989 IGLV2-18A0A075B6J9 118 aa17.18■□□□□ 0.34
LDLRAD3-203ENST00000528989 PRSS47A8MTI9 375 aa17.18■□□□□ 0.34
LDLRAD3-203ENST00000528989 IGLL5B9A064 214 aa17.18■□□□□ 0.34
LDLRAD3-203ENST00000528989 SMIM2Q9BVW6 85 aa17.18■□□□□ 0.34
LDLRAD3-203ENST00000528989 NUDT3O95989 172 aa17.18■□□□□ 0.34
LDLRAD3-203ENST00000528989 RAB5BP61020 215 aa17.18■□□□□ 0.34
LDLRAD3-203ENST00000528989 PRSS3P2Q8NHM4 247 aa17.18■□□□□ 0.34
LDLRAD3-203ENST00000528989 TMA7Q9Y2S6 64 aaKnown RBP17.18■□□□□ 0.34
LDLRAD3-203ENST00000528989 TRBV27A0A0K0K1C4 114 aa17.17■□□□□ 0.34
LDLRAD3-203ENST00000528989 TCAPO15273 167 aa17.17■□□□□ 0.34
LDLRAD3-203ENST00000528989 Q0VG73 95 aa17.17■□□□□ 0.34
LDLRAD3-203ENST00000528989 NIT1Q86X76 327 aa17.16■□□□□ 0.34
LDLRAD3-203ENST00000528989 BAGE3Q86Y29 109 aa17.16■□□□□ 0.34
LDLRAD3-203ENST00000528989 VCYO14598 125 aa17.16■□□□□ 0.34
LDLRAD3-203ENST00000528989 ICOSQ9Y6W8 199 aa17.16■□□□□ 0.34
LDLRAD3-203ENST00000528989 H3BNG1 76 aa17.15■□□□□ 0.34
LDLRAD3-203ENST00000528989 NUPR1O60356 82 aa17.15■□□□□ 0.34
LDLRAD3-203ENST00000528989 PMCHP20382 165 aa17.15■□□□□ 0.34
LDLRAD3-203ENST00000528989 MRPL23Q16540 153 aaKnown RBP17.15■□□□□ 0.34
LDLRAD3-203ENST00000528989 ATP6V0E2Q8NHE4 81 aa17.15■□□□□ 0.34
LDLRAD3-203ENST00000528989 I3L3M4 83 aa17.14■□□□□ 0.33
LDLRAD3-203ENST00000528989 NDUFA6P56556 154 aa17.14■□□□□ 0.33
LDLRAD3-203ENST00000528989 LINC00310P59036 64 aa17.14■□□□□ 0.33
LDLRAD3-203ENST00000528989 Q8N8P6 123 aa17.14■□□□□ 0.33
LDLRAD3-203ENST00000528989 CEMP1Q6PRD7 247 aaPredicted RBP17.14■□□□□ 0.33
LDLRAD3-203ENST00000528989 LINC00614P0C842 121 aa17.13■□□□□ 0.33
LDLRAD3-203ENST00000528989 RPL32P62910 135 aaKnown RBP17.13■□□□□ 0.33
LDLRAD3-203ENST00000528989 DAZ4Q86SG3 579 aaKnown RBP17.13■□□□□ 0.33
LDLRAD3-203ENST00000528989 DAZ3Q9NR90 486 aaKnown RBP17.13■□□□□ 0.33
LDLRAD3-203ENST00000528989 SERF1AO75920 110 aa17.12■□□□□ 0.33
LDLRAD3-203ENST00000528989 TSHBP01222 138 aa17.12■□□□□ 0.33
LDLRAD3-203ENST00000528989 RNASEKQ6P5S7 137 aaKnown RBP17.12■□□□□ 0.33
LDLRAD3-203ENST00000528989 NTM-AS1Q6ZSK4 140 aa17.12■□□□□ 0.33
LDLRAD3-203ENST00000528989 NXT2Q9NPJ8 142 aaKnown RBP17.12■□□□□ 0.33
LDLRAD3-203ENST00000528989 ZFAND6Q6FIF0 208 aa17.12■□□□□ 0.33
LDLRAD3-203ENST00000528989 STARD9Q9P2P6 4700 aa17.11■□□□□ 0.33
LDLRAD3-203ENST00000528989 KIR2DL4Q99706 377 aa17.11■□□□□ 0.33
LDLRAD3-203ENST00000528989 FA2HQ7L5A8 372 aa17.1■□□□□ 0.33
LDLRAD3-203ENST00000528989 DYNC2H1Q8NCM8 4307 aaKnown RBP17.1■□□□□ 0.33
LDLRAD3-203ENST00000528989 PMCHL1Q16048 86 aa17.1■□□□□ 0.33
LDLRAD3-203ENST00000528989 WWC2-AS2Q96NR7 200 aa17.09■□□□□ 0.33
LDLRAD3-203ENST00000528989 COTL1Q14019 142 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms