RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 SRIP30626 198 aa11.11□□□□□ -0.63
TSPAN4-213ENST00000524895 NRACQ8N912 160 aa11.11□□□□□ -0.63
TSPAN4-213ENST00000524895 NIT2Q9NQR4 276 aa11.11□□□□□ -0.63
TSPAN4-213ENST00000524895 TNFRSF6BO95407 300 aa11.1□□□□□ -0.63
TSPAN4-213ENST00000524895 GYPEP15421 78 aa11.1□□□□□ -0.63
TSPAN4-213ENST00000524895 RPL36AP83881 106 aaKnown RBP11.1□□□□□ -0.63
TSPAN4-213ENST00000524895 NEXN-AS1Q8NBZ9 246 aa11.1□□□□□ -0.63
TSPAN4-213ENST00000524895 RPL36ALQ969Q0 106 aaKnown RBP11.1□□□□□ -0.63
TSPAN4-213ENST00000524895 VSIG2Q96IQ7 327 aa11.1□□□□□ -0.63
TSPAN4-213ENST00000524895 DNAJC30Q96LL9 226 aa11.1□□□□□ -0.63
TSPAN4-213ENST00000524895 ALKBH7Q9BT30 221 aaPredicted RBP11.1□□□□□ -0.63
TSPAN4-213ENST00000524895 LAMTOR2Q9Y2Q5 125 aa11.1□□□□□ -0.63
TSPAN4-213ENST00000524895 TNFRSF18Q9Y5U5 241 aa11.1□□□□□ -0.63
TSPAN4-213ENST00000524895 LOC100131303A0A0U1RQF7 123 aa11.09□□□□□ -0.63
TSPAN4-213ENST00000524895 GAGE12JA6NER3 117 aa11.09□□□□□ -0.63
TSPAN4-213ENST00000524895 PHOX2AO14813 284 aa11.09□□□□□ -0.63
TSPAN4-213ENST00000524895 NPYP01303 97 aa11.09□□□□□ -0.63
TSPAN4-213ENST00000524895 GAGE1Q13065 139 aa11.09□□□□□ -0.63
TSPAN4-213ENST00000524895 GAGE4Q13068 117 aa11.09□□□□□ -0.63
TSPAN4-213ENST00000524895 GAGE5Q13069 117 aa11.09□□□□□ -0.63
TSPAN4-213ENST00000524895 GAGE13Q4V321 117 aa11.09□□□□□ -0.63
TSPAN4-213ENST00000524895 ST20Q9HBF5 79 aa11.09□□□□□ -0.63
TSPAN4-213ENST00000524895 Q9UF83 564 aa11.09□□□□□ -0.63
TSPAN4-213ENST00000524895 ZNRF2Q8NHG8 242 aa11.08□□□□□ -0.64
TSPAN4-213ENST00000524895 TRBV7-3A0A075B6L6 115 aa11.07□□□□□ -0.64
TSPAN4-213ENST00000524895 TRBV6-5A0A0K0K1A5 114 aa11.07□□□□□ -0.64
TSPAN4-213ENST00000524895 H3BNG1 76 aa11.07□□□□□ -0.64
TSPAN4-213ENST00000524895 SUMO2P61956 95 aaKnown RBP11.07□□□□□ -0.64
TSPAN4-213ENST00000524895 C20orf78Q9BR46 151 aa11.07□□□□□ -0.64
TSPAN4-213ENST00000524895 MAP1LC3AQ9H492 121 aa11.07□□□□□ -0.64
TSPAN4-213ENST00000524895 ICOSQ9Y6W8 199 aa11.07□□□□□ -0.64
TSPAN4-213ENST00000524895 NUPR2A6NF83 97 aa11.06□□□□□ -0.64
TSPAN4-213ENST00000524895 SDHAF1A6NFY7 115 aa11.06□□□□□ -0.64
TSPAN4-213ENST00000524895 C1orf196B1AJZ1 125 aa11.06□□□□□ -0.64
TSPAN4-213ENST00000524895 TGP01266 2768 aa11.05□□□□□ -0.64
TSPAN4-213ENST00000524895 LOC389332A0A1B0GUA5 103 aa11.05□□□□□ -0.64
TSPAN4-213ENST00000524895 IGLL5B9A064 214 aa11.05□□□□□ -0.64
TSPAN4-213ENST00000524895 UBE2D3P61077 147 aa11.05□□□□□ -0.64
TSPAN4-213ENST00000524895 UBE2D2P62837 147 aa11.05□□□□□ -0.64
TSPAN4-213ENST00000524895 MRPL23Q16540 153 aaKnown RBP11.05□□□□□ -0.64
TSPAN4-213ENST00000524895 CEMP1Q6PRD7 247 aaPredicted RBP11.05□□□□□ -0.64
TSPAN4-213ENST00000524895 WWC2-AS2Q96NR7 200 aa11.05□□□□□ -0.64
TSPAN4-213ENST00000524895 TMEM70Q9BUB7 260 aa11.05□□□□□ -0.64
TSPAN4-213ENST00000524895 NUDT3O95989 172 aa11.04□□□□□ -0.64
TSPAN4-213ENST00000524895 LINC00694P0DN24 101 aa11.04□□□□□ -0.64
TSPAN4-213ENST00000524895 IQCJQ1A5X6 159 aa11.04□□□□□ -0.64
TSPAN4-213ENST00000524895 C18orf32Q8TCD1 76 aa11.04□□□□□ -0.64
TSPAN4-213ENST00000524895 SMIM2Q9BVW6 85 aa11.04□□□□□ -0.64
TSPAN4-213ENST00000524895 A0A096LPF7 62 aa11.03□□□□□ -0.64
TSPAN4-213ENST00000524895 IGHV3-38A0A0C4DH36 116 aa11.03□□□□□ -0.64
TSPAN4-213ENST00000524895 PMCHP20382 165 aa11.03□□□□□ -0.64
TSPAN4-213ENST00000524895 NEGR1Q7Z3B1 354 aa11.03□□□□□ -0.64
TSPAN4-213ENST00000524895 SH2D6Q7Z4S9 175 aa11.03□□□□□ -0.64
TSPAN4-213ENST00000524895 DAZ4Q86SG3 579 aaKnown RBP11.03□□□□□ -0.64
TSPAN4-213ENST00000524895 C15orf53Q8NAA6 179 aa11.03□□□□□ -0.64
TSPAN4-213ENST00000524895 DAZ3Q9NR90 486 aaKnown RBP11.03□□□□□ -0.64
TSPAN4-213ENST00000524895 KLK5Q9Y337 293 aaPredicted RBP11.03□□□□□ -0.64
TSPAN4-213ENST00000524895 I3L3M4 83 aa11.02□□□□□ -0.65
TSPAN4-213ENST00000524895 VCYO14598 125 aa11.02□□□□□ -0.65
TSPAN4-213ENST00000524895 HIST1H2BKO60814 126 aa11.02□□□□□ -0.65
TSPAN4-213ENST00000524895 HIST1H2BJP06899 126 aa11.02□□□□□ -0.65
TSPAN4-213ENST00000524895 HIST1H2BOP23527 126 aa11.02□□□□□ -0.65
TSPAN4-213ENST00000524895 HIST1H2BBP33778 126 aa11.02□□□□□ -0.65
TSPAN4-213ENST00000524895 POLR2KP53803 58 aaKnown RBP11.02□□□□□ -0.65
TSPAN4-213ENST00000524895 HIST1H2BDP58876 126 aa11.02□□□□□ -0.65
TSPAN4-213ENST00000524895 RAB5BP61020 215 aa11.02□□□□□ -0.65
TSPAN4-213ENST00000524895 HIST1H2BCP62807 126 aa11.02□□□□□ -0.65
TSPAN4-213ENST00000524895 RPL32P62910 135 aaKnown RBP11.02□□□□□ -0.65
TSPAN4-213ENST00000524895 HIST2H2BEQ16778 126 aa11.02□□□□□ -0.65
TSPAN4-213ENST00000524895 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.02□□□□□ -0.65
TSPAN4-213ENST00000524895 ATP6V0E2Q8NHE4 81 aa11.02□□□□□ -0.65
TSPAN4-213ENST00000524895 PRSS3P2Q8NHM4 247 aa11.02□□□□□ -0.65
TSPAN4-213ENST00000524895 MUC7Q8TAX7 377 aa11.02□□□□□ -0.65
TSPAN4-213ENST00000524895 HIST1H2BHQ93079 126 aa11.02□□□□□ -0.65
TSPAN4-213ENST00000524895 HIST1H2BNQ99877 126 aa11.02□□□□□ -0.65
TSPAN4-213ENST00000524895 HIST1H2BMQ99879 126 aa11.02□□□□□ -0.65
TSPAN4-213ENST00000524895 TRBV27A0A0K0K1C4 114 aa11.01□□□□□ -0.65
TSPAN4-213ENST00000524895 PRSS47A8MTI9 375 aa11.01□□□□□ -0.65
TSPAN4-213ENST00000524895 ZFAND6Q6FIF0 208 aa11.01□□□□□ -0.65
TSPAN4-213ENST00000524895 KIR2DL4Q99706 377 aa11.01□□□□□ -0.65
TSPAN4-213ENST00000524895 NXT2Q9NPJ8 142 aaKnown RBP11.01□□□□□ -0.65
TSPAN4-213ENST00000524895 IFI27P40305 119 aaPredicted RBP11□□□□□ -0.65
TSPAN4-213ENST00000524895 COTL1Q14019 142 aa11□□□□□ -0.65
TSPAN4-213ENST00000524895 BAGE3Q86Y29 109 aa11□□□□□ -0.65
TSPAN4-213ENST00000524895 Q8N8P6 123 aa11□□□□□ -0.65
TSPAN4-213ENST00000524895 FCER1GP30273 86 aa10.99□□□□□ -0.65
TSPAN4-213ENST00000524895 Q0VG73 95 aa10.99□□□□□ -0.65
TSPAN4-213ENST00000524895 FA2HQ7L5A8 372 aa10.99□□□□□ -0.65
TSPAN4-213ENST00000524895 DEFB104AQ8WTQ1 72 aa10.99□□□□□ -0.65
TSPAN4-213ENST00000524895 DNAH7Q8WXX0 4024 aa10.99□□□□□ -0.65
TSPAN4-213ENST00000524895 IGLV2-18A0A075B6J9 118 aa10.98□□□□□ -0.65
TSPAN4-213ENST00000524895 TCAPO15273 167 aa10.98□□□□□ -0.65
TSPAN4-213ENST00000524895 TSHBP01222 138 aa10.98□□□□□ -0.65
TSPAN4-213ENST00000524895 TMEM97Q5BJF2 176 aa10.98□□□□□ -0.65
TSPAN4-213ENST00000524895 RNASEKQ6P5S7 137 aaKnown RBP10.98□□□□□ -0.65
TSPAN4-213ENST00000524895 GTSF1LQ9H1H1 148 aa10.98□□□□□ -0.65
TSPAN4-213ENST00000524895 AMTP48728 403 aa10.96□□□□□ -0.65
TSPAN4-213ENST00000524895 TCTAP57738 103 aa10.96□□□□□ -0.65
TSPAN4-213ENST00000524895 NIT1Q86X76 327 aa10.96□□□□□ -0.65
TSPAN4-213ENST00000524895 AP5S1Q9NUS5 200 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms