RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 H3BRM9 83 aa18.83■□□□□ 0.6
COL13A1-213ENST00000520267 LINC01549A6NIU2 74 aa18.82■□□□□ 0.6
COL13A1-213ENST00000520267 CCL24O00175 119 aa18.82■□□□□ 0.6
COL13A1-213ENST00000520267 RNASE8Q8TDE3 154 aaKnown RBP18.82■□□□□ 0.6
COL13A1-213ENST00000520267 GCSHP23434 173 aa18.81■□□□□ 0.6
COL13A1-213ENST00000520267 JMJD8Q96S16 334 aa18.81■□□□□ 0.6
COL13A1-213ENST00000520267 IGHV3-73A0A0B4J1V6 119 aa18.81■□□□□ 0.6
COL13A1-213ENST00000520267 K7EP13 123 aa18.81■□□□□ 0.6
COL13A1-213ENST00000520267 TMEM141Q96I45 108 aa18.8■□□□□ 0.6
COL13A1-213ENST00000520267 TIMM17AQ99595 171 aa18.8■□□□□ 0.6
COL13A1-213ENST00000520267 CITED2Q99967 270 aaPredicted RBP18.8■□□□□ 0.6
COL13A1-213ENST00000520267 FXYD2P54710 66 aa18.8■□□□□ 0.6
COL13A1-213ENST00000520267 ODF3L2Q3SX64 289 aa18.8■□□□□ 0.6
COL13A1-213ENST00000520267 NF1P21359 2839 aa18.8■□□□□ 0.6
COL13A1-213ENST00000520267 IGLV4-69A0A075B6H9 119 aa18.79■□□□□ 0.6
COL13A1-213ENST00000520267 PROK1P58294 105 aa18.79■□□□□ 0.6
COL13A1-213ENST00000520267 OR11H12B2RN74 326 aa18.79■□□□□ 0.6
COL13A1-213ENST00000520267 PMVKQ15126 192 aa18.79■□□□□ 0.6
COL13A1-213ENST00000520267 OR11H2Q8NH07 326 aa18.79■□□□□ 0.6
COL13A1-213ENST00000520267 ANK3Q12955 4377 aaKnown RBP18.78■□□□□ 0.6
COL13A1-213ENST00000520267 M0R2P5 195 aa18.78■□□□□ 0.6
COL13A1-213ENST00000520267 P0DMU3 169 aa18.78■□□□□ 0.6
COL13A1-213ENST00000520267 FAM231AP0DMU4 169 aa18.78■□□□□ 0.6
COL13A1-213ENST00000520267 FAM231CP0DMU5 169 aa18.78■□□□□ 0.6
COL13A1-213ENST00000520267 NSUN5P1Q3KNT7 163 aa18.78■□□□□ 0.6
COL13A1-213ENST00000520267 OR4C5Q8NGB2 326 aa18.78■□□□□ 0.6
COL13A1-213ENST00000520267 LINC01006Q8NI28 216 aa18.78■□□□□ 0.6
COL13A1-213ENST00000520267 LINC01587Q99440 93 aa18.78■□□□□ 0.6
COL13A1-213ENST00000520267 CST9LQ9H4G1 147 aa18.78■□□□□ 0.6
COL13A1-213ENST00000520267 C9orf118A6NHY6 69 aa18.77■□□□□ 0.6
COL13A1-213ENST00000520267 EMP1P54849 157 aa18.77■□□□□ 0.6
COL13A1-213ENST00000520267 ZNF415Q09FC8 603 aa18.77■□□□□ 0.6
COL13A1-213ENST00000520267 RHOHQ15669 191 aa18.77■□□□□ 0.6
COL13A1-213ENST00000520267 RAB37Q96AX2 223 aa18.77■□□□□ 0.6
COL13A1-213ENST00000520267 WNK1Q9H4A3 2382 aa18.77■□□□□ 0.6
COL13A1-213ENST00000520267 NACAE9PAV3 2078 aa18.77■□□□□ 0.6
COL13A1-213ENST00000520267 E9PLD3 99 aa18.77■□□□□ 0.6
COL13A1-213ENST00000520267 TRAV25A0A0B4J276 109 aa18.76■□□□□ 0.59
COL13A1-213ENST00000520267 C11orf86A6NJI1 115 aa18.76■□□□□ 0.59
COL13A1-213ENST00000520267 RNASE1P07998 156 aaKnown RBP18.76■□□□□ 0.59
COL13A1-213ENST00000520267 NAA38Q9BRA0 125 aaKnown RBP18.76■□□□□ 0.59
COL13A1-213ENST00000520267 ACANP16112 2415 aa18.76■□□□□ 0.59
COL13A1-213ENST00000520267 I3L3M4 83 aa18.76■□□□□ 0.59
COL13A1-213ENST00000520267 UFSP1Q6NVU6 142 aa18.76■□□□□ 0.59
COL13A1-213ENST00000520267 MYMXA0A1B0GTQ4 84 aa18.75■□□□□ 0.59
COL13A1-213ENST00000520267 C11orf72Q8NBR9 251 aa18.75■□□□□ 0.59
COL13A1-213ENST00000520267 PRADC1Q9BSG0 188 aa18.75■□□□□ 0.59
COL13A1-213ENST00000520267 INSP01308 110 aa18.75■□□□□ 0.59
COL13A1-213ENST00000520267 COTL1Q14019 142 aa18.75■□□□□ 0.59
COL13A1-213ENST00000520267 CEND1Q8N111 149 aa18.75■□□□□ 0.59
COL13A1-213ENST00000520267 EDA2RQ9HAV5 297 aa18.75■□□□□ 0.59
COL13A1-213ENST00000520267 H3BUT2 72 aa18.74■□□□□ 0.59
COL13A1-213ENST00000520267 LINC00467Q9BRT7 94 aa18.74■□□□□ 0.59
COL13A1-213ENST00000520267 C16orf95Q9H693 158 aa18.74■□□□□ 0.59
COL13A1-213ENST00000520267 TSSC4Q9Y5U2 329 aaPredicted RBP18.74■□□□□ 0.59
COL13A1-213ENST00000520267 A8MWV9 139 aa18.74■□□□□ 0.59
COL13A1-213ENST00000520267 OPRPNQ99935 248 aaPredicted RBP18.74■□□□□ 0.59
COL13A1-213ENST00000520267 TM2D2Q9BX73 214 aa18.74■□□□□ 0.59
COL13A1-213ENST00000520267 XCL2Q9UBD3 114 aa18.73■□□□□ 0.59
COL13A1-213ENST00000520267 C20orf203Q8NBC4 194 aa18.72■□□□□ 0.59
COL13A1-213ENST00000520267 CLUHP3Q96NS8 147 aa18.72■□□□□ 0.59
COL13A1-213ENST00000520267 ITPR2Q14571 2701 aa18.72■□□□□ 0.59
COL13A1-213ENST00000520267 PIK3CD-AS1Q5SR53 167 aa18.71■□□□□ 0.59
COL13A1-213ENST00000520267 Q6ZSN1 163 aa18.71■□□□□ 0.59
COL13A1-213ENST00000520267 PTH2Q96A98 100 aa18.71■□□□□ 0.59
COL13A1-213ENST00000520267 SMIM13P0DJ93 91 aa18.71■□□□□ 0.59
COL13A1-213ENST00000520267 PAPPA-AS1Q5QFB9 102 aa18.71■□□□□ 0.59
COL13A1-213ENST00000520267 CFAP126Q5VTH2 177 aa18.71■□□□□ 0.59
COL13A1-213ENST00000520267 STHQ8IWL8 128 aa18.71■□□□□ 0.59
COL13A1-213ENST00000520267 MRPL16Q9NX20 251 aaKnown RBP18.7■□□□□ 0.58
COL13A1-213ENST00000520267 Q9UF83 564 aa18.7■□□□□ 0.58
COL13A1-213ENST00000520267 TAL2Q16559 108 aa18.7■□□□□ 0.58
COL13A1-213ENST00000520267 ZNRF2Q8NHG8 242 aa18.7■□□□□ 0.58
COL13A1-213ENST00000520267 K7ERJ3 54 aa18.69■□□□□ 0.58
COL13A1-213ENST00000520267 AZU1P20160 251 aa18.69■□□□□ 0.58
COL13A1-213ENST00000520267 HELZ2Q9BYK8 2649 aaKnown RBP18.69■□□□□ 0.58
COL13A1-213ENST00000520267 HIST1H4GQ99525 98 aa18.68■□□□□ 0.58
COL13A1-213ENST00000520267 C1orf158Q8N1D5 194 aa18.67■□□□□ 0.58
COL13A1-213ENST00000520267 NHP2Q9NX24 153 aaKnown RBP18.67■□□□□ 0.58
COL13A1-213ENST00000520267 TRBV7-3A0A075B6L6 115 aa18.67■□□□□ 0.58
COL13A1-213ENST00000520267 SPXQ9BT56 116 aa18.67■□□□□ 0.58
COL13A1-213ENST00000520267 TNFRSF18Q9Y5U5 241 aa18.67■□□□□ 0.58
COL13A1-213ENST00000520267 ZNF815PA8K554 130 aa18.66■□□□□ 0.58
COL13A1-213ENST00000520267 GAGE10A6NGK3 116 aa18.66■□□□□ 0.58
COL13A1-213ENST00000520267 BEAN1Q3B7T3 259 aa18.66■□□□□ 0.58
COL13A1-213ENST00000520267 PHLDA1Q8WV24 401 aaPredicted RBP18.66■□□□□ 0.58
COL13A1-213ENST00000520267 IGHV3OR16-12A0A075B7B8 117 aa18.65■□□□□ 0.58
COL13A1-213ENST00000520267 TMEM170BQ5T4T1 132 aa18.65■□□□□ 0.58
COL13A1-213ENST00000520267 HERVK_113P61574 105 aa18.65■□□□□ 0.58
COL13A1-213ENST00000520267 PLEKHB2Q96CS7 222 aa18.65■□□□□ 0.58
COL13A1-213ENST00000520267 A0A1W2PPM0 123 aa18.63■□□□□ 0.57
COL13A1-213ENST00000520267 HILS1P60008 231 aa18.63■□□□□ 0.57
COL13A1-213ENST00000520267 ZNF418Q8TF45 676 aaPredicted RBP18.63■□□□□ 0.57
COL13A1-213ENST00000520267 SMR3AQ99954 134 aa18.63■□□□□ 0.57
COL13A1-213ENST00000520267 IGLV4-3A0A075B6K6 122 aa18.63■□□□□ 0.57
COL13A1-213ENST00000520267 SAP30O75446 220 aa18.63■□□□□ 0.57
COL13A1-213ENST00000520267 RS1O15537 224 aa18.62■□□□□ 0.57
COL13A1-213ENST00000520267 MTORP42345 2549 aa18.62■□□□□ 0.57
COL13A1-213ENST00000520267 SCGB2A2Q13296 93 aa18.62■□□□□ 0.57
COL13A1-213ENST00000520267 NFE4Q86UQ8 179 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms