RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 TMEM97Q5BJF2 176 aa8.42□□□□□ -1.06
PTPRF-214ENST00000496043 RAB19A4D1S5 217 aa8.41□□□□□ -1.06
PTPRF-214ENST00000496043 RBFOX3A6NFN3 312 aa8.41□□□□□ -1.06
PTPRF-214ENST00000496043 PDE6DO43924 150 aa8.41□□□□□ -1.06
PTPRF-214ENST00000496043 GNG4P50150 75 aa8.41□□□□□ -1.06
PTPRF-214ENST00000496043 PKIAP61925 76 aa8.41□□□□□ -1.06
PTPRF-214ENST00000496043 CENPWQ5EE01 88 aa8.41□□□□□ -1.06
PTPRF-214ENST00000496043 SLC51BQ86UW2 128 aa8.41□□□□□ -1.06
PTPRF-214ENST00000496043 OR2D3Q8NGH3 330 aa8.41□□□□□ -1.06
PTPRF-214ENST00000496043 SMIM12Q96EX1 92 aa8.41□□□□□ -1.06
PTPRF-214ENST00000496043 BIN3Q9NQY0 253 aa8.41□□□□□ -1.06
PTPRF-214ENST00000496043 MED9Q9NWA0 146 aa8.41□□□□□ -1.06
PTPRF-214ENST00000496043 FAM30AQ9NZY2 134 aa8.41□□□□□ -1.06
PTPRF-214ENST00000496043 KIF25-AS1Q9Y6Z4 181 aa8.41□□□□□ -1.06
PTPRF-214ENST00000496043 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.4□□□□□ -1.06
PTPRF-214ENST00000496043 XKRY2A2RUG3 117 aa8.4□□□□□ -1.06
PTPRF-214ENST00000496043 IGLV2-8P01709 118 aa8.4□□□□□ -1.06
PTPRF-214ENST00000496043 GZMBP10144 247 aa8.4□□□□□ -1.06
PTPRF-214ENST00000496043 NKX2-5P52952 324 aaPredicted RBP8.4□□□□□ -1.06
PTPRF-214ENST00000496043 CACNG7P62955 275 aa8.4□□□□□ -1.06
PTPRF-214ENST00000496043 HAMPP81172 84 aa8.4□□□□□ -1.06
PTPRF-214ENST00000496043 MEF2BQ02080 365 aaPredicted RBP8.4□□□□□ -1.06
PTPRF-214ENST00000496043 FER1L6-AS1Q8NA97 138 aa8.4□□□□□ -1.06
PTPRF-214ENST00000496043 DNAJC30Q96LL9 226 aa8.4□□□□□ -1.06
PTPRF-214ENST00000496043 AP1S3Q96PC3 154 aa8.4□□□□□ -1.06
PTPRF-214ENST00000496043 CHCHD5Q9BSY4 110 aa8.4□□□□□ -1.06
PTPRF-214ENST00000496043 TPPP3Q9BW30 176 aa8.4□□□□□ -1.06
PTPRF-214ENST00000496043 C19orf71A6NCJ1 209 aa8.39□□□□□ -1.07
PTPRF-214ENST00000496043 F2Z2F3 143 aa8.39□□□□□ -1.07
PTPRF-214ENST00000496043 P01737 135 aa8.39□□□□□ -1.07
PTPRF-214ENST00000496043 IGLC6P0CF74 106 aa8.39□□□□□ -1.07
PTPRF-214ENST00000496043 ATRAIDQ6UW56 229 aa8.39□□□□□ -1.07
PTPRF-214ENST00000496043 C9orf62Q8N4C0 152 aa8.39□□□□□ -1.07
PTPRF-214ENST00000496043 VAX2Q9UIW0 290 aa8.39□□□□□ -1.07
PTPRF-214ENST00000496043 FAT1Q14517 4588 aa8.39□□□□□ -1.07
PTPRF-214ENST00000496043 H7C1H1 209 aa8.38□□□□□ -1.07
PTPRF-214ENST00000496043 ANGP03950 147 aaKnown RBP8.38□□□□□ -1.07
PTPRF-214ENST00000496043 TAGLN2P37802 199 aaKnown RBP8.38□□□□□ -1.07
PTPRF-214ENST00000496043 ENHOQ6UWT2 76 aa8.38□□□□□ -1.07
PTPRF-214ENST00000496043 C15orf54Q8N8G6 183 aa8.38□□□□□ -1.07
PTPRF-214ENST00000496043 C1orf43Q9BWL3 253 aa8.38□□□□□ -1.07
PTPRF-214ENST00000496043 CRPP02741 224 aa8.37□□□□□ -1.07
PTPRF-214ENST00000496043 MGPP08493 103 aa8.37□□□□□ -1.07
PTPRF-214ENST00000496043 BCL2P10415 239 aa8.37□□□□□ -1.07
PTPRF-214ENST00000496043 C14orf177Q52M58 125 aa8.37□□□□□ -1.07
PTPRF-214ENST00000496043 MPV17L2Q567V2 206 aa8.37□□□□□ -1.07
PTPRF-214ENST00000496043 NTM-AS1Q6ZSK4 140 aa8.37□□□□□ -1.07
PTPRF-214ENST00000496043 TRBV25-1A0A075B6N4 114 aa8.36□□□□□ -1.07
PTPRF-214ENST00000496043 M0QY20 66 aa8.36□□□□□ -1.07
PTPRF-214ENST00000496043 TRGC1P0CF51 173 aa8.36□□□□□ -1.07
PTPRF-214ENST00000496043 WDR73Q6P4I2 378 aa8.36□□□□□ -1.07
PTPRF-214ENST00000496043 LYZL1Q6UWQ5 148 aa8.36□□□□□ -1.07
PTPRF-214ENST00000496043 Q6ZSA8 131 aa8.36□□□□□ -1.07
PTPRF-214ENST00000496043 NUDT10Q8NFP7 164 aa8.36□□□□□ -1.07
PTPRF-214ENST00000496043 NUDT11Q96G61 164 aa8.36□□□□□ -1.07
PTPRF-214ENST00000496043 DNAH8Q96JB1 4490 aa8.35□□□□□ -1.07
PTPRF-214ENST00000496043 TRBV20OR9-2A0A075B6H5 130 aa8.35□□□□□ -1.07
PTPRF-214ENST00000496043 IGHV1-24A0A0C4DH33 117 aa8.35□□□□□ -1.07
PTPRF-214ENST00000496043 NTF3P20783 257 aa8.35□□□□□ -1.07
PTPRF-214ENST00000496043 GAGE6Q13070 117 aa8.35□□□□□ -1.07
PTPRF-214ENST00000496043 RBX1P62877 108 aa8.34□□□□□ -1.07
PTPRF-214ENST00000496043 MIAQ16674 131 aa8.34□□□□□ -1.07
PTPRF-214ENST00000496043 IQCJQ1A5X6 159 aa8.34□□□□□ -1.07
PTPRF-214ENST00000496043 LINC01620Q4KN68 170 aa8.34□□□□□ -1.07
PTPRF-214ENST00000496043 SUMO4Q6EEV6 95 aa8.34□□□□□ -1.07
PTPRF-214ENST00000496043 RASL11AQ6T310 242 aa8.34□□□□□ -1.07
PTPRF-214ENST00000496043 DPH3P1Q9H4G8 78 aa8.34□□□□□ -1.07
PTPRF-214ENST00000496043 NIT2Q9NQR4 276 aa8.34□□□□□ -1.07
PTPRF-214ENST00000496043 PLA2G1BP04054 148 aaKnown RBP8.33□□□□□ -1.08
PTPRF-214ENST00000496043 BLOC1S1P78537 153 aa8.33□□□□□ -1.08
PTPRF-214ENST00000496043 LINC00269Q8N2A0 174 aa8.33□□□□□ -1.08
PTPRF-214ENST00000496043 OCC1Q8TAD7 63 aa8.33□□□□□ -1.08
PTPRF-214ENST00000496043 PRR34Q9NV39 138 aa8.33□□□□□ -1.08
PTPRF-214ENST00000496043 TWIST1Q15672 202 aa8.32□□□□□ -1.08
PTPRF-214ENST00000496043 USP17L23D6RBM5 183 aa8.31□□□□□ -1.08
PTPRF-214ENST00000496043 TMEM243Q9BU79 118 aa8.31□□□□□ -1.08
PTPRF-214ENST00000496043 CHAC1Q9BUX1 264 aa8.31□□□□□ -1.08
PTPRF-214ENST00000496043 RNASE7Q9H1E1 156 aaKnown RBP8.31□□□□□ -1.08
PTPRF-214ENST00000496043 RPP21Q9H633 154 aaKnown RBP8.31□□□□□ -1.08
PTPRF-214ENST00000496043 VPS13BQ7Z7G8 4022 aa8.31□□□□□ -1.08
PTPRF-214ENST00000496043 A0A1B0GUV1 79 aa8.3□□□□□ -1.08
PTPRF-214ENST00000496043 K7EN84 100 aa8.3□□□□□ -1.08
PTPRF-214ENST00000496043 HLA-DQA1P01909 254 aa8.3□□□□□ -1.08
PTPRF-214ENST00000496043 CTRLP40313 264 aa8.3□□□□□ -1.08
PTPRF-214ENST00000496043 DGAT2L7PQ6IED9 249 aa8.3□□□□□ -1.08
PTPRF-214ENST00000496043 LINC00528Q8N1L1 170 aa8.3□□□□□ -1.08
PTPRF-214ENST00000496043 PGLYRP4Q96LB8 373 aa8.3□□□□□ -1.08
PTPRF-214ENST00000496043 TRAV8-4A0A0B4J246 113 aa8.29□□□□□ -1.08
PTPRF-214ENST00000496043 TMEM250H0YL14 139 aa8.29□□□□□ -1.08
PTPRF-214ENST00000496043 GATCO43716 136 aaKnown RBP8.29□□□□□ -1.08
PTPRF-214ENST00000496043 REG3AQ06141 175 aa8.29□□□□□ -1.08
PTPRF-214ENST00000496043 COTL1Q14019 142 aa8.29□□□□□ -1.08
PTPRF-214ENST00000496043 CLPSL2Q6UWE3 100 aa8.29□□□□□ -1.08
PTPRF-214ENST00000496043 ALKAL2Q6UX46 152 aa8.29□□□□□ -1.08
PTPRF-214ENST00000496043 SCXQ7RTU7 201 aa8.29□□□□□ -1.08
PTPRF-214ENST00000496043 SMIM15Q7Z3B0 74 aa8.29□□□□□ -1.08
PTPRF-214ENST00000496043 CNFNQ9BYD5 112 aa8.29□□□□□ -1.08
PTPRF-214ENST00000496043 UBE2L6O14933 153 aa8.28□□□□□ -1.08
PTPRF-214ENST00000496043 PRSS1P07477 247 aa8.28□□□□□ -1.08
PTPRF-214ENST00000496043 KRTAP26-1Q6PEX3 210 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms