RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 P0DMU3 169 aa13.01□□□□□ -0.33
MCF2L-230ENST00000491028 FAM231AP0DMU4 169 aa13.01□□□□□ -0.33
MCF2L-230ENST00000491028 FAM231CP0DMU5 169 aa13.01□□□□□ -0.33
MCF2L-230ENST00000491028 GYPEP15421 78 aa13.01□□□□□ -0.33
MCF2L-230ENST00000491028 RPS10P46783 165 aaKnown RBP13.01□□□□□ -0.33
MCF2L-230ENST00000491028 FABP9Q0Z7S8 132 aa13.01□□□□□ -0.33
MCF2L-230ENST00000491028 NEXN-AS1Q8NBZ9 246 aa13.01□□□□□ -0.33
MCF2L-230ENST00000491028 ICOSQ9Y6W8 199 aa13.01□□□□□ -0.33
MCF2L-230ENST00000491028 TRBV6-5A0A0K0K1A5 114 aa13□□□□□ -0.33
MCF2L-230ENST00000491028 LOC100131303A0A0U1RQF7 123 aa13□□□□□ -0.33
MCF2L-230ENST00000491028 SMKR1H3BMG3 65 aa13□□□□□ -0.33
MCF2L-230ENST00000491028 PHOX2AO14813 284 aa13□□□□□ -0.33
MCF2L-230ENST00000491028 OR10J3Q5JRS4 329 aa13□□□□□ -0.33
MCF2L-230ENST00000491028 LAMTOR2Q9Y2Q5 125 aa13□□□□□ -0.33
MCF2L-230ENST00000491028 TRBV7-3A0A075B6L6 115 aa12.99□□□□□ -0.33
MCF2L-230ENST00000491028 IGLL5B9A064 214 aa12.99□□□□□ -0.33
MCF2L-230ENST00000491028 LINC00694P0DN24 101 aa12.99□□□□□ -0.33
MCF2L-230ENST00000491028 MRPL23Q16540 153 aaKnown RBP12.99□□□□□ -0.33
MCF2L-230ENST00000491028 SH2D6Q7Z4S9 175 aa12.99□□□□□ -0.33
MCF2L-230ENST00000491028 NRACQ8N912 160 aa12.99□□□□□ -0.33
MCF2L-230ENST00000491028 RPL39LQ96EH5 51 aaKnown RBP12.99□□□□□ -0.33
MCF2L-230ENST00000491028 PRELID3AQ96N28 172 aa12.99□□□□□ -0.33
MCF2L-230ENST00000491028 TNFRSF18Q9Y5U5 241 aa12.99□□□□□ -0.33
MCF2L-230ENST00000491028 GAGE12JA6NER3 117 aa12.98□□□□□ -0.33
MCF2L-230ENST00000491028 GAS8-AS1O95177 125 aa12.98□□□□□ -0.33
MCF2L-230ENST00000491028 TCTAP57738 103 aa12.98□□□□□ -0.33
MCF2L-230ENST00000491028 GAGE1Q13065 139 aa12.98□□□□□ -0.33
MCF2L-230ENST00000491028 GAGE4Q13068 117 aa12.98□□□□□ -0.33
MCF2L-230ENST00000491028 GAGE5Q13069 117 aa12.98□□□□□ -0.33
MCF2L-230ENST00000491028 KIAA1644Q3SXP7 199 aa12.98□□□□□ -0.33
MCF2L-230ENST00000491028 GAGE13Q4V321 117 aa12.98□□□□□ -0.33
MCF2L-230ENST00000491028 ZNRF2Q8NHG8 242 aa12.98□□□□□ -0.33
MCF2L-230ENST00000491028 Q9UF83 564 aa12.98□□□□□ -0.33
MCF2L-230ENST00000491028 A0A096LPF7 62 aa12.97□□□□□ -0.33
MCF2L-230ENST00000491028 TNFRSF6BO95407 300 aa12.97□□□□□ -0.33
MCF2L-230ENST00000491028 SRIP30626 198 aa12.97□□□□□ -0.33
MCF2L-230ENST00000491028 UBE2D3P61077 147 aa12.97□□□□□ -0.33
MCF2L-230ENST00000491028 UBE2D2P62837 147 aa12.97□□□□□ -0.33
MCF2L-230ENST00000491028 NUDT3O95989 172 aa12.96□□□□□ -0.33
MCF2L-230ENST00000491028 NPYP01303 97 aa12.96□□□□□ -0.33
MCF2L-230ENST00000491028 C20orf78Q9BR46 151 aa12.96□□□□□ -0.33
MCF2L-230ENST00000491028 ALKBH7Q9BT30 221 aaPredicted RBP12.96□□□□□ -0.33
MCF2L-230ENST00000491028 ST20Q9HBF5 79 aa12.96□□□□□ -0.33
MCF2L-230ENST00000491028 C3orf84H3BNL1 204 aa12.95□□□□□ -0.34
MCF2L-230ENST00000491028 TRGC2P03986 189 aa12.95□□□□□ -0.34
MCF2L-230ENST00000491028 SUMO2P61956 95 aaKnown RBP12.95□□□□□ -0.34
MCF2L-230ENST00000491028 ZFAND6Q6FIF0 208 aa12.95□□□□□ -0.34
MCF2L-230ENST00000491028 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.95□□□□□ -0.34
MCF2L-230ENST00000491028 DNAH7Q8WXX0 4024 aa12.94□□□□□ -0.34
MCF2L-230ENST00000491028 SDHAF1A6NFY7 115 aa12.94□□□□□ -0.34
MCF2L-230ENST00000491028 RPL32P62910 135 aaKnown RBP12.94□□□□□ -0.34
MCF2L-230ENST00000491028 NEGR1Q7Z3B1 354 aa12.94□□□□□ -0.34
MCF2L-230ENST00000491028 DAZ4Q86SG3 579 aaKnown RBP12.94□□□□□ -0.34
MCF2L-230ENST00000491028 ATP6V0E2Q8NHE4 81 aa12.94□□□□□ -0.34
MCF2L-230ENST00000491028 DAZ3Q9NR90 486 aaKnown RBP12.94□□□□□ -0.34
MCF2L-230ENST00000491028 PRSS47A8MTI9 375 aa12.93□□□□□ -0.34
MCF2L-230ENST00000491028 TMEM70Q9BUB7 260 aa12.93□□□□□ -0.34
MCF2L-230ENST00000491028 MAP1LC3AQ9H492 121 aa12.93□□□□□ -0.34
MCF2L-230ENST00000491028 APLNQ9ULZ1 77 aa12.93□□□□□ -0.34
MCF2L-230ENST00000491028 POLR2KP53803 58 aaKnown RBP12.92□□□□□ -0.34
MCF2L-230ENST00000491028 TRBV27A0A0K0K1C4 114 aa12.91□□□□□ -0.34
MCF2L-230ENST00000491028 TMEM97Q5BJF2 176 aa12.91□□□□□ -0.34
MCF2L-230ENST00000491028 SMIM2Q9BVW6 85 aa12.91□□□□□ -0.34
MCF2L-230ENST00000491028 VCYO14598 125 aa12.9□□□□□ -0.34
MCF2L-230ENST00000491028 TIRAPP58753 221 aa12.9□□□□□ -0.34
MCF2L-230ENST00000491028 GTSF1LQ9H1H1 148 aa12.9□□□□□ -0.34
MCF2L-230ENST00000491028 I3L3M4 83 aa12.89□□□□□ -0.35
MCF2L-230ENST00000491028 PMCHP20382 165 aa12.89□□□□□ -0.35
MCF2L-230ENST00000491028 CASC10Q5T4H9 136 aa12.89□□□□□ -0.35
MCF2L-230ENST00000491028 IGHV3-38A0A0C4DH36 116 aa12.88□□□□□ -0.35
MCF2L-230ENST00000491028 COTL1Q14019 142 aa12.88□□□□□ -0.35
MCF2L-230ENST00000491028 KIR2DL4Q99706 377 aa12.88□□□□□ -0.35
MCF2L-230ENST00000491028 NXT2Q9NPJ8 142 aaKnown RBP12.88□□□□□ -0.35
MCF2L-230ENST00000491028 DYNC2H1Q8NCM8 4307 aaKnown RBP12.88□□□□□ -0.35
MCF2L-230ENST00000491028 TCAPO15273 167 aa12.87□□□□□ -0.35
MCF2L-230ENST00000491028 LYPD5Q6UWN5 251 aa12.87□□□□□ -0.35
MCF2L-230ENST00000491028 C18orf32Q8TCD1 76 aa12.87□□□□□ -0.35
MCF2L-230ENST00000491028 IGLV2-18A0A075B6J9 118 aa12.86□□□□□ -0.35
MCF2L-230ENST00000491028 LOC389332A0A1B0GUA5 103 aa12.86□□□□□ -0.35
MCF2L-230ENST00000491028 Q8N8P6 123 aa12.86□□□□□ -0.35
MCF2L-230ENST00000491028 STARD9Q9P2P6 4700 aa12.85□□□□□ -0.35
MCF2L-230ENST00000491028 K7EMI3 77 aa12.85□□□□□ -0.35
MCF2L-230ENST00000491028 CCL18P55774 89 aa12.85□□□□□ -0.35
MCF2L-230ENST00000491028 ESRGQ1W209 222 aa12.85□□□□□ -0.35
MCF2L-230ENST00000491028 LELP1Q5T871 98 aa12.85□□□□□ -0.35
MCF2L-230ENST00000491028 CSMD3Q7Z407 3707 aa12.85□□□□□ -0.35
MCF2L-230ENST00000491028 TRBV6-8A0A0A6YYG3 113 aa12.84□□□□□ -0.35
MCF2L-230ENST00000491028 C1orf196B1AJZ1 125 aa12.84□□□□□ -0.35
MCF2L-230ENST00000491028 TSHBP01222 138 aa12.84□□□□□ -0.35
MCF2L-230ENST00000491028 FCER1GP30273 86 aa12.84□□□□□ -0.35
MCF2L-230ENST00000491028 IQCJQ1A5X6 159 aa12.84□□□□□ -0.35
MCF2L-230ENST00000491028 PRSS3P2Q8NHM4 247 aa12.84□□□□□ -0.35
MCF2L-230ENST00000491028 TRBV25-1A0A075B6N4 114 aa12.83□□□□□ -0.36
MCF2L-230ENST00000491028 IGHV1-24A0A0C4DH33 117 aa12.83□□□□□ -0.36
MCF2L-230ENST00000491028 IFI27P40305 119 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-230ENST00000491028 Q0VG73 95 aa12.83□□□□□ -0.36
MCF2L-230ENST00000491028 NTM-AS1Q6ZSK4 140 aa12.83□□□□□ -0.36
MCF2L-230ENST00000491028 AMTP48728 403 aa12.82□□□□□ -0.36
MCF2L-230ENST00000491028 RAB5BP61020 215 aa12.82□□□□□ -0.36
MCF2L-230ENST00000491028 MRPS16Q9Y3D3 137 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms