RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 SCP2D1Q9UJQ7 156 aa0.77□□□□□ -2.29
NF1-213ENST00000489712 V9GYV3 84 aa0.77□□□□□ -2.29
NF1-213ENST00000489712 A2ML1A8K2U0 1454 aa0.77□□□□□ -2.29
NF1-213ENST00000489712 BCORL1Q5H9F3 1711 aa0.77□□□□□ -2.29
NF1-213ENST00000489712 LAMB1P07942 1786 aa0.77□□□□□ -2.29
NF1-213ENST00000489712 SPAG17Q6Q759 2223 aa0.76□□□□□ -2.29
NF1-213ENST00000489712 RBBP6Q7Z6E9 1792 aaKnown RBP0.76□□□□□ -2.29
NF1-213ENST00000489712 NWD2Q9ULI1 1742 aa0.76□□□□□ -2.29
NF1-213ENST00000489712 TRAV13-2A0A0B4J235 113 aa0.76□□□□□ -2.29
NF1-213ENST00000489712 SPAARA0A1B0GVQ0 90 aa0.76□□□□□ -2.29
NF1-213ENST00000489712 F2Z2F3 143 aa0.76□□□□□ -2.29
NF1-213ENST00000489712 SSSCA1O60232 199 aa0.76□□□□□ -2.29
NF1-213ENST00000489712 SPINT3P49223 89 aa0.76□□□□□ -2.29
NF1-213ENST00000489712 UBE2D1P51668 147 aa0.76□□□□□ -2.29
NF1-213ENST00000489712 Q8N6K4 173 aa0.76□□□□□ -2.29
NF1-213ENST00000489712 Q8N8P6 123 aa0.76□□□□□ -2.29
NF1-213ENST00000489712 PLAC4Q8WY50 150 aa0.76□□□□□ -2.29
NF1-213ENST00000489712 C12orf57Q99622 126 aa0.76□□□□□ -2.29
NF1-213ENST00000489712 SPTBP11277 2137 aa0.76□□□□□ -2.29
NF1-213ENST00000489712 CITO14578 2027 aa0.76□□□□□ -2.29
NF1-213ENST00000489712 NRXN2Q9P2S2 1712 aa0.75□□□□□ -2.29
NF1-213ENST00000489712 MAPKBP1O60336 1514 aa0.75□□□□□ -2.29
NF1-213ENST00000489712 ASCC3Q8N3C0 2202 aaKnown RBP0.75□□□□□ -2.29
NF1-213ENST00000489712 MED12Q93074 2177 aa0.75□□□□□ -2.29
NF1-213ENST00000489712 HCG22E2RYF7 251 aa0.75□□□□□ -2.29
NF1-213ENST00000489712 SIX6O95475 246 aa0.75□□□□□ -2.29
NF1-213ENST00000489712 IFITM1P13164 125 aa0.75□□□□□ -2.29
NF1-213ENST00000489712 ATP5EP56381 51 aaPredicted RBP0.75□□□□□ -2.29
NF1-213ENST00000489712 ELOF1P60002 83 aaKnown RBP0.75□□□□□ -2.29
NF1-213ENST00000489712 INSL4Q14641 139 aa0.75□□□□□ -2.29
NF1-213ENST00000489712 MYOZ3Q8TDC0 251 aa0.75□□□□□ -2.29
NF1-213ENST00000489712 LINC00312Q9Y6C7 94 aa0.75□□□□□ -2.29
NF1-213ENST00000489712 PARP14Q460N5 1801 aa0.75□□□□□ -2.29
NF1-213ENST00000489712 MUC22E2RYF6 1773 aaPredicted RBP0.75□□□□□ -2.29
NF1-213ENST00000489712 CUL7Q14999 1698 aa0.75□□□□□ -2.29
NF1-213ENST00000489712 UBE2L5PA0A1B0GUS4 154 aa0.74□□□□□ -2.29
NF1-213ENST00000489712 OOSP1A8MZH6 123 aa0.74□□□□□ -2.29
NF1-213ENST00000489712 ATP6V1G2-DDX39BF2Z307 99 aa0.74□□□□□ -2.29
NF1-213ENST00000489712 EDDM3BP56851 147 aa0.74□□□□□ -2.29
NF1-213ENST00000489712 UBE2L3P68036 154 aaKnown RBP0.74□□□□□ -2.29
NF1-213ENST00000489712 SPINK9Q5DT21 86 aa0.74□□□□□ -2.29
NF1-213ENST00000489712 C10orf128Q5T292 105 aa0.74□□□□□ -2.29
NF1-213ENST00000489712 C5orf38Q86SI9 138 aa0.74□□□□□ -2.29
NF1-213ENST00000489712 TTC9CQ8N5M4 171 aa0.74□□□□□ -2.29
NF1-213ENST00000489712 CYP4F30PQ9H0H9 118 aa0.74□□□□□ -2.29
NF1-213ENST00000489712 CPSF1Q10570 1443 aaKnown RBP0.73□□□□□ -2.29
NF1-213ENST00000489712 CASKIN1Q8WXD9 1431 aa0.73□□□□□ -2.29
NF1-213ENST00000489712 TMEM218A2RU14 115 aa0.73□□□□□ -2.29
NF1-213ENST00000489712 RBP2P50120 134 aa0.73□□□□□ -2.29
NF1-213ENST00000489712 ZNF137PP52743 207 aa0.73□□□□□ -2.29
NF1-213ENST00000489712 DCDP81605 110 aaKnown RBP0.73□□□□□ -2.29
NF1-213ENST00000489712 COMMD6Q7Z4G1 85 aa0.73□□□□□ -2.29
NF1-213ENST00000489712 R4GMQ9 66 aa0.73□□□□□ -2.29
NF1-213ENST00000489712 LRRC37A3O60309 1634 aa0.73□□□□□ -2.29
NF1-213ENST00000489712 NRKQ7Z2Y5 1582 aa0.73□□□□□ -2.29
NF1-213ENST00000489712 LAMA4Q16363 1823 aa0.73□□□□□ -2.29
NF1-213ENST00000489712 PHIPQ8WWQ0 1821 aa0.73□□□□□ -2.29
NF1-213ENST00000489712 PPIP5K1Q6PFW1 1433 aa0.72□□□□□ -2.29
NF1-213ENST00000489712 K7EIL1 84 aa0.72□□□□□ -2.29
NF1-213ENST00000489712 LY6G6CO95867 125 aa0.72□□□□□ -2.29
NF1-213ENST00000489712 PPP1R17O96001 155 aa0.72□□□□□ -2.29
NF1-213ENST00000489712 SPINK8P0C7L1 97 aa0.72□□□□□ -2.29
NF1-213ENST00000489712 ACYP2P14621 99 aa0.72□□□□□ -2.29
NF1-213ENST00000489712 RPL37P61927 97 aaKnown RBP0.72□□□□□ -2.29
NF1-213ENST00000489712 HSD52Q0P140 79 aa0.72□□□□□ -2.29
NF1-213ENST00000489712 C6orf52Q5T4I8 152 aa0.72□□□□□ -2.29
NF1-213ENST00000489712 C14orf144Q96I85 54 aa0.72□□□□□ -2.29
NF1-213ENST00000489712 BPESC1Q9GZL8 116 aa0.72□□□□□ -2.29
NF1-213ENST00000489712 PZPP20742 1482 aa0.72□□□□□ -2.29
NF1-213ENST00000489712 ARAP2Q8WZ64 1704 aa0.72□□□□□ -2.29
NF1-213ENST00000489712 QRICH2Q9H0J4 1663 aa0.72□□□□□ -2.29
NF1-213ENST00000489712 PLXNA1Q9UIW2 1896 aa0.71□□□□□ -2.3
NF1-213ENST00000489712 CNTRLQ7Z7A1 2325 aa0.71□□□□□ -2.3
NF1-213ENST00000489712 A0A096LNT2 108 aa0.71□□□□□ -2.3
NF1-213ENST00000489712 KRTAP10-4P60372 401 aaPredicted RBP0.71□□□□□ -2.3
NF1-213ENST00000489712 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.71□□□□□ -2.3
NF1-213ENST00000489712 BAGE3Q86Y29 109 aa0.71□□□□□ -2.3
NF1-213ENST00000489712 SMIM11BQ8TCY0 68 aa0.71□□□□□ -2.3
NF1-213ENST00000489712 PRR15LQ9BU68 103 aa0.71□□□□□ -2.3
NF1-213ENST00000489712 LENEPQ9Y5L5 61 aa0.71□□□□□ -2.3
NF1-213ENST00000489712 MYH8P13535 1937 aa0.71□□□□□ -2.3
NF1-213ENST00000489712 PATJQ8NI35 1801 aa0.71□□□□□ -2.3
NF1-213ENST00000489712 TNS1Q9HBL0 1735 aaKnown RBP0.7□□□□□ -2.3
NF1-213ENST00000489712 ESPL1Q14674 2120 aa0.7□□□□□ -2.3
NF1-213ENST00000489712 COL6A6A6NMZ7 2263 aa0.7□□□□□ -2.3
NF1-213ENST00000489712 TRAV30A0A087WSZ9 112 aa0.7□□□□□ -2.3
NF1-213ENST00000489712 LOC285095A0A1B0GVY8 99 aa0.7□□□□□ -2.3
NF1-213ENST00000489712 H3BQ15 152 aa0.7□□□□□ -2.3
NF1-213ENST00000489712 KRTDAPP60985 99 aa0.7□□□□□ -2.3
NF1-213ENST00000489712 GNG11P61952 73 aa0.7□□□□□ -2.3
NF1-213ENST00000489712 SPAG11BQ08648 103 aa0.7□□□□□ -2.3
NF1-213ENST00000489712 SPAG11AQ6PDA7 123 aa0.7□□□□□ -2.3
NF1-213ENST00000489712 ACBD7Q8N6N7 88 aa0.7□□□□□ -2.3
NF1-213ENST00000489712 MGST2Q99735 147 aa0.7□□□□□ -2.3
NF1-213ENST00000489712 DPH3P1Q9H4G8 78 aa0.7□□□□□ -2.3
NF1-213ENST00000489712 DYNLRB1Q9NP97 96 aa0.7□□□□□ -2.3
NF1-213ENST00000489712 UQCR10Q9UDW1 63 aa0.7□□□□□ -2.3
NF1-213ENST00000489712 AP4S1Q9Y587 144 aa0.7□□□□□ -2.3
NF1-213ENST00000489712 DOCK2Q92608 1830 aa0.7□□□□□ -2.3
NF1-213ENST00000489712 ARFGEF1Q9Y6D6 1849 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms