RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 GZMBP10144 247 aa12.22□□□□□ -0.45
PRPF40A-209ENST00000486100 FER1L6-AS1Q8NA97 138 aa12.22□□□□□ -0.45
PRPF40A-209ENST00000486100 AP1S3Q96PC3 154 aa12.22□□□□□ -0.45
PRPF40A-209ENST00000486100 TRBV6-8A0A0A6YYG3 113 aa12.21□□□□□ -0.45
PRPF40A-209ENST00000486100 XKRY2A2RUG3 117 aa12.21□□□□□ -0.45
PRPF40A-209ENST00000486100 RBFOX3A6NFN3 312 aa12.21□□□□□ -0.45
PRPF40A-209ENST00000486100 P01737 135 aa12.21□□□□□ -0.45
PRPF40A-209ENST00000486100 ELOBQ15370 118 aa12.21□□□□□ -0.45
PRPF40A-209ENST00000486100 KCNIP4Q6PIL6 250 aa12.21□□□□□ -0.45
PRPF40A-209ENST00000486100 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.21□□□□□ -0.45
PRPF40A-209ENST00000486100 RMI2Q96E14 147 aa12.21□□□□□ -0.45
PRPF40A-209ENST00000486100 TPPP3Q9BW30 176 aa12.21□□□□□ -0.45
PRPF40A-209ENST00000486100 KLK12Q9UKR0 248 aa12.21□□□□□ -0.45
PRPF40A-209ENST00000486100 CACNG7P62955 275 aa12.2□□□□□ -0.46
PRPF40A-209ENST00000486100 BLOC1S1P78537 153 aa12.2□□□□□ -0.46
PRPF40A-209ENST00000486100 WFDC2Q14508 124 aa12.2□□□□□ -0.46
PRPF40A-209ENST00000486100 ALKAL2Q6UX46 152 aa12.2□□□□□ -0.46
PRPF40A-209ENST00000486100 TMEM262E9PQX1 116 aa12.19□□□□□ -0.46
PRPF40A-209ENST00000486100 F2Z2F3 143 aa12.19□□□□□ -0.46
PRPF40A-209ENST00000486100 EPM2AB3EWF7 344 aa12.18□□□□□ -0.46
PRPF40A-209ENST00000486100 UBE2WQ96B02 151 aa12.18□□□□□ -0.46
PRPF40A-209ENST00000486100 DNAJC30Q96LL9 226 aa12.18□□□□□ -0.46
PRPF40A-209ENST00000486100 IGKV2D-24A0A075B6R9 120 aa12.17□□□□□ -0.46
PRPF40A-209ENST00000486100 TMEM97Q5BJF2 176 aa12.17□□□□□ -0.46
PRPF40A-209ENST00000486100 LYZL1Q6UWQ5 148 aa12.17□□□□□ -0.46
PRPF40A-209ENST00000486100 NUDT10Q8NFP7 164 aa12.17□□□□□ -0.46
PRPF40A-209ENST00000486100 BAALCQ8WXS3 180 aa12.17□□□□□ -0.46
PRPF40A-209ENST00000486100 NUDT11Q96G61 164 aa12.17□□□□□ -0.46
PRPF40A-209ENST00000486100 TMEM70Q9BUB7 260 aa12.17□□□□□ -0.46
PRPF40A-209ENST00000486100 M0QY20 66 aa12.16□□□□□ -0.46
PRPF40A-209ENST00000486100 LECT2O14960 151 aa12.16□□□□□ -0.46
PRPF40A-209ENST00000486100 Q0VG73 95 aa12.16□□□□□ -0.46
PRPF40A-209ENST00000486100 NTM-AS1Q6ZSK4 140 aa12.16□□□□□ -0.46
PRPF40A-209ENST00000486100 H7C1H1 209 aa12.15□□□□□ -0.46
PRPF40A-209ENST00000486100 MGPP08493 103 aa12.15□□□□□ -0.46
PRPF40A-209ENST00000486100 RAB14P61106 215 aa12.15□□□□□ -0.46
PRPF40A-209ENST00000486100 PKIAP61925 76 aa12.15□□□□□ -0.46
PRPF40A-209ENST00000486100 WDR73Q6P4I2 378 aa12.15□□□□□ -0.46
PRPF40A-209ENST00000486100 ATRAIDQ6UW56 229 aa12.15□□□□□ -0.46
PRPF40A-209ENST00000486100 OCC1Q8TAD7 63 aa12.15□□□□□ -0.46
PRPF40A-209ENST00000486100 CHCHD5Q9BSY4 110 aa12.15□□□□□ -0.46
PRPF40A-209ENST00000486100 FAT1Q14517 4588 aa12.15□□□□□ -0.46
PRPF40A-209ENST00000486100 TRGC1P0CF51 173 aa12.14□□□□□ -0.47
PRPF40A-209ENST00000486100 NTF3P20783 257 aa12.14□□□□□ -0.47
PRPF40A-209ENST00000486100 Q8N976 141 aa12.14□□□□□ -0.47
PRPF40A-209ENST00000486100 LYPD6BQ8NI32 183 aa12.14□□□□□ -0.47
PRPF40A-209ENST00000486100 K7EN84 100 aa12.13□□□□□ -0.47
PRPF40A-209ENST00000486100 IFITM2Q01629 132 aa12.13□□□□□ -0.47
PRPF40A-209ENST00000486100 MPV17L2Q567V2 206 aa12.13□□□□□ -0.47
PRPF40A-209ENST00000486100 SUMO4Q6EEV6 95 aa12.13□□□□□ -0.47
PRPF40A-209ENST00000486100 ENHOQ6UWT2 76 aa12.13□□□□□ -0.47
PRPF40A-209ENST00000486100 C15orf54Q8N8G6 183 aa12.13□□□□□ -0.47
PRPF40A-209ENST00000486100 DNAH8Q96JB1 4490 aa12.12□□□□□ -0.47
PRPF40A-209ENST00000486100 TMEM250H0YL14 139 aa12.12□□□□□ -0.47
PRPF40A-209ENST00000486100 FRZBQ92765 325 aa12.12□□□□□ -0.47
PRPF40A-209ENST00000486100 RNASE7Q9H1E1 156 aaKnown RBP12.12□□□□□ -0.47
PRPF40A-209ENST00000486100 DPH3P1Q9H4G8 78 aa12.12□□□□□ -0.47
PRPF40A-209ENST00000486100 RPP21Q9H633 154 aaKnown RBP12.12□□□□□ -0.47
PRPF40A-209ENST00000486100 FAM30AQ9NZY2 134 aa12.12□□□□□ -0.47
PRPF40A-209ENST00000486100 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.11□□□□□ -0.47
PRPF40A-209ENST00000486100 TRBV25-1A0A075B6N4 114 aa12.11□□□□□ -0.47
PRPF40A-209ENST00000486100 SMR3BP02814 79 aaPredicted RBP12.11□□□□□ -0.47
PRPF40A-209ENST00000486100 ANGP03950 147 aaKnown RBP12.11□□□□□ -0.47
PRPF40A-209ENST00000486100 CTRLP40313 264 aa12.11□□□□□ -0.47
PRPF40A-209ENST00000486100 RASL11AQ6T310 242 aa12.11□□□□□ -0.47
PRPF40A-209ENST00000486100 C1orf43Q9BWL3 253 aa12.11□□□□□ -0.47
PRPF40A-209ENST00000486100 CNFNQ9BYD5 112 aa12.11□□□□□ -0.47
PRPF40A-209ENST00000486100 CRPP02741 224 aa12.1□□□□□ -0.47
PRPF40A-209ENST00000486100 IQCJQ1A5X6 159 aa12.1□□□□□ -0.47
PRPF40A-209ENST00000486100 CLLU1Q5K131 121 aa12.1□□□□□ -0.47
PRPF40A-209ENST00000486100 Q5VSD8 79 aa12.1□□□□□ -0.47
PRPF40A-209ENST00000486100 IGHV1-24A0A0C4DH33 117 aa12.09□□□□□ -0.47
PRPF40A-209ENST00000486100 RBX1P62877 108 aa12.09□□□□□ -0.47
PRPF40A-209ENST00000486100 HAMPP81172 84 aa12.09□□□□□ -0.47
PRPF40A-209ENST00000486100 GAGE6Q13070 117 aa12.09□□□□□ -0.47
PRPF40A-209ENST00000486100 TWIST1Q15672 202 aa12.09□□□□□ -0.47
PRPF40A-209ENST00000486100 NIT2Q9NQR4 276 aa12.09□□□□□ -0.47
PRPF40A-209ENST00000486100 MIAQ16674 131 aa12.07□□□□□ -0.48
PRPF40A-209ENST00000486100 FAM231DQ6ZW35 169 aa12.07□□□□□ -0.48
PRPF40A-209ENST00000486100 PRR34Q9NV39 138 aa12.07□□□□□ -0.48
PRPF40A-209ENST00000486100 FAM229AH3BQW9 127 aa12.06□□□□□ -0.48
PRPF40A-209ENST00000486100 GATCO43716 136 aaKnown RBP12.06□□□□□ -0.48
PRPF40A-209ENST00000486100 NDUFS6O75380 124 aaKnown RBP12.06□□□□□ -0.48
PRPF40A-209ENST00000486100 INAFM2P0DMQ5 153 aa12.06□□□□□ -0.48
PRPF40A-209ENST00000486100 Q6ZSA8 131 aa12.06□□□□□ -0.48
PRPF40A-209ENST00000486100 GTSF1Q8WW33 167 aa12.06□□□□□ -0.48
PRPF40A-209ENST00000486100 CEBPGP53567 150 aa12.05□□□□□ -0.48
PRPF40A-209ENST00000486100 C14orf177Q52M58 125 aa12.05□□□□□ -0.48
PRPF40A-209ENST00000486100 LINC00269Q8N2A0 174 aa12.05□□□□□ -0.48
PRPF40A-209ENST00000486100 PGLYRP4Q96LB8 373 aa12.05□□□□□ -0.48
PRPF40A-209ENST00000486100 EIF5A2Q9GZV4 153 aaKnown RBP12.05□□□□□ -0.48
PRPF40A-209ENST00000486100 A8MWL6 223 aa12.04□□□□□ -0.48
PRPF40A-209ENST00000486100 TMEM243Q9BU79 118 aa12.04□□□□□ -0.48
PRPF40A-209ENST00000486100 SMDT1Q9H4I9 107 aa12.04□□□□□ -0.48
PRPF40A-209ENST00000486100 VPS13BQ7Z7G8 4022 aa12.03□□□□□ -0.48
PRPF40A-209ENST00000486100 A0A1B0GUV1 79 aa12.03□□□□□ -0.48
PRPF40A-209ENST00000486100 FOXA3P55318 350 aaPredicted RBP12.03□□□□□ -0.48
PRPF40A-209ENST00000486100 LINC01620Q4KN68 170 aa12.03□□□□□ -0.48
PRPF40A-209ENST00000486100 SMIM15Q7Z3B0 74 aa12.03□□□□□ -0.48
PRPF40A-209ENST00000486100 GATD1Q8NB37 220 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms