RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 BOLA1Q9Y3E2 137 aa12.64□□□□□ -0.39
EPHB4-205ENST00000478459 DNAH8Q96JB1 4490 aa12.63□□□□□ -0.39
EPHB4-205ENST00000478459 TRAV8-3A0A0A6YYJ7 113 aa12.63□□□□□ -0.39
EPHB4-205ENST00000478459 C19orf71A6NCJ1 209 aa12.63□□□□□ -0.39
EPHB4-205ENST00000478459 LINC01620Q4KN68 170 aa12.63□□□□□ -0.39
EPHB4-205ENST00000478459 AP1S3Q96PC3 154 aa12.63□□□□□ -0.39
EPHB4-205ENST00000478459 KIF25-AS1Q9Y6Z4 181 aa12.63□□□□□ -0.39
EPHB4-205ENST00000478459 EPM2AB3EWF7 344 aa12.62□□□□□ -0.39
EPHB4-205ENST00000478459 PDE6DO43924 150 aa12.62□□□□□ -0.39
EPHB4-205ENST00000478459 P01737 135 aa12.62□□□□□ -0.39
EPHB4-205ENST00000478459 KCNIP4Q6PIL6 250 aa12.62□□□□□ -0.39
EPHB4-205ENST00000478459 OR10G8Q8NGN5 311 aa12.62□□□□□ -0.39
EPHB4-205ENST00000478459 CHCHD5Q9BSY4 110 aa12.62□□□□□ -0.39
EPHB4-205ENST00000478459 VAX2Q9UIW0 290 aa12.62□□□□□ -0.39
EPHB4-205ENST00000478459 TRBV6-8A0A0A6YYG3 113 aa12.61□□□□□ -0.39
EPHB4-205ENST00000478459 IGLC6P0CF74 106 aa12.61□□□□□ -0.39
EPHB4-205ENST00000478459 NKX2-5P52952 324 aaPredicted RBP12.61□□□□□ -0.39
EPHB4-205ENST00000478459 TOR2AQ5JU69 321 aa12.61□□□□□ -0.39
EPHB4-205ENST00000478459 LYZL1Q6UWQ5 148 aa12.61□□□□□ -0.39
EPHB4-205ENST00000478459 C15orf54Q8N8G6 183 aa12.61□□□□□ -0.39
EPHB4-205ENST00000478459 FAM30AQ9NZY2 134 aa12.61□□□□□ -0.39
EPHB4-205ENST00000478459 CEBPGP53567 150 aa12.6□□□□□ -0.39
EPHB4-205ENST00000478459 MPV17L2Q567V2 206 aa12.6□□□□□ -0.39
EPHB4-205ENST00000478459 CLPSL2Q6UWE3 100 aa12.6□□□□□ -0.39
EPHB4-205ENST00000478459 RPS20P60866 119 aaKnown RBP12.59□□□□□ -0.39
EPHB4-205ENST00000478459 GAGE6Q13070 117 aa12.59□□□□□ -0.39
EPHB4-205ENST00000478459 Q5VSD8 79 aa12.59□□□□□ -0.39
EPHB4-205ENST00000478459 SUMO4Q6EEV6 95 aa12.59□□□□□ -0.39
EPHB4-205ENST00000478459 NTM-AS1Q6ZSK4 140 aa12.59□□□□□ -0.39
EPHB4-205ENST00000478459 Q8N976 141 aa12.59□□□□□ -0.39
EPHB4-205ENST00000478459 NUDT10Q8NFP7 164 aa12.59□□□□□ -0.39
EPHB4-205ENST00000478459 NTN5Q8WTR8 489 aaPredicted RBP12.59□□□□□ -0.39
EPHB4-205ENST00000478459 NUDT11Q96G61 164 aa12.59□□□□□ -0.39
EPHB4-205ENST00000478459 RNASE7Q9H1E1 156 aaKnown RBP12.59□□□□□ -0.39
EPHB4-205ENST00000478459 K7EN84 100 aa12.58□□□□□ -0.4
EPHB4-205ENST00000478459 VPS13BQ7Z7G8 4022 aa12.57□□□□□ -0.4
EPHB4-205ENST00000478459 A0A1B0GVG6 124 aa12.57□□□□□ -0.4
EPHB4-205ENST00000478459 ANGP03950 147 aaKnown RBP12.57□□□□□ -0.4
EPHB4-205ENST00000478459 OCC1Q8TAD7 63 aa12.57□□□□□ -0.4
EPHB4-205ENST00000478459 NTF3P20783 257 aa12.56□□□□□ -0.4
EPHB4-205ENST00000478459 ENHOQ6UWT2 76 aa12.56□□□□□ -0.4
EPHB4-205ENST00000478459 RMI2Q96E14 147 aa12.56□□□□□ -0.4
EPHB4-205ENST00000478459 SRRM2Q9UQ35 2752 aaKnown RBP12.55□□□□□ -0.4
EPHB4-205ENST00000478459 M0QY20 66 aa12.55□□□□□ -0.4
EPHB4-205ENST00000478459 CACNG7P62955 275 aa12.55□□□□□ -0.4
EPHB4-205ENST00000478459 ELOBQ15370 118 aa12.55□□□□□ -0.4
EPHB4-205ENST00000478459 ATRAIDQ6UW56 229 aa12.55□□□□□ -0.4
EPHB4-205ENST00000478459 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.55□□□□□ -0.4
EPHB4-205ENST00000478459 FRZBQ92765 325 aa12.55□□□□□ -0.4
EPHB4-205ENST00000478459 XKRY2A2RUG3 117 aa12.54□□□□□ -0.4
EPHB4-205ENST00000478459 CRPP02741 224 aa12.54□□□□□ -0.4
EPHB4-205ENST00000478459 TWIST1Q15672 202 aa12.54□□□□□ -0.4
EPHB4-205ENST00000478459 SMIM12Q96EX1 92 aa12.54□□□□□ -0.4
EPHB4-205ENST00000478459 HLA-DQA1P01909 254 aa12.53□□□□□ -0.4
EPHB4-205ENST00000478459 C1orf43Q9BWL3 253 aa12.53□□□□□ -0.4
EPHB4-205ENST00000478459 RPP21Q9H633 154 aaKnown RBP12.53□□□□□ -0.4
EPHB4-205ENST00000478459 TRAV26-2A0A0B4J265 109 aa12.52□□□□□ -0.41
EPHB4-205ENST00000478459 INAFM2P0DMQ5 153 aa12.52□□□□□ -0.41
EPHB4-205ENST00000478459 BLOC1S1P78537 153 aa12.52□□□□□ -0.41
EPHB4-205ENST00000478459 CHCHD7Q9BUK0 85 aa12.52□□□□□ -0.41
EPHB4-205ENST00000478459 BIN3Q9NQY0 253 aa12.52□□□□□ -0.41
EPHB4-205ENST00000478459 COX11Q9Y6N1 276 aa12.52□□□□□ -0.41
EPHB4-205ENST00000478459 TRBV25-1A0A075B6N4 114 aa12.51□□□□□ -0.41
EPHB4-205ENST00000478459 F2Z2F3 143 aa12.51□□□□□ -0.41
EPHB4-205ENST00000478459 TRGC1P0CF51 173 aa12.51□□□□□ -0.41
EPHB4-205ENST00000478459 FOXA3P55318 350 aaPredicted RBP12.51□□□□□ -0.41
EPHB4-205ENST00000478459 RBX1P62877 108 aa12.51□□□□□ -0.41
EPHB4-205ENST00000478459 TMEM70Q9BUB7 260 aa12.51□□□□□ -0.41
EPHB4-205ENST00000478459 DPH3P1Q9H4G8 78 aa12.51□□□□□ -0.41
EPHB4-205ENST00000478459 H7C1H1 209 aa12.5□□□□□ -0.41
EPHB4-205ENST00000478459 TAGLN2P37802 199 aaKnown RBP12.5□□□□□ -0.41
EPHB4-205ENST00000478459 CTRLP40313 264 aa12.5□□□□□ -0.41
EPHB4-205ENST00000478459 Q0VG73 95 aa12.5□□□□□ -0.41
EPHB4-205ENST00000478459 RASL11AQ6T310 242 aa12.5□□□□□ -0.41
EPHB4-205ENST00000478459 LINC00269Q8N2A0 174 aa12.5□□□□□ -0.41
EPHB4-205ENST00000478459 IGLV10-54A0A075B6I4 117 aa12.49□□□□□ -0.41
EPHB4-205ENST00000478459 IGHV1-24A0A0C4DH33 117 aa12.49□□□□□ -0.41
EPHB4-205ENST00000478459 GATCO43716 136 aaKnown RBP12.49□□□□□ -0.41
EPHB4-205ENST00000478459 GTSF1Q8WW33 167 aa12.49□□□□□ -0.41
EPHB4-205ENST00000478459 EIF5A2Q9GZV4 153 aaKnown RBP12.49□□□□□ -0.41
EPHB4-205ENST00000478459 PGLYRP4Q96LB8 373 aa12.48□□□□□ -0.41
EPHB4-205ENST00000478459 FAM229AH3BQW9 127 aa12.47□□□□□ -0.41
EPHB4-205ENST00000478459 TMEM97Q5BJF2 176 aa12.47□□□□□ -0.41
EPHB4-205ENST00000478459 NIT2Q9NQR4 276 aa12.47□□□□□ -0.41
EPHB4-205ENST00000478459 IQCJQ1A5X6 159 aa12.46□□□□□ -0.41
EPHB4-205ENST00000478459 GATD1Q8NB37 220 aa12.46□□□□□ -0.41
EPHB4-205ENST00000478459 RPL39LQ96EH5 51 aaKnown RBP12.46□□□□□ -0.41
EPHB4-205ENST00000478459 IGLV4-60A0A075B6I1 120 aa12.45□□□□□ -0.42
EPHB4-205ENST00000478459 USP17L23D6RBM5 183 aa12.45□□□□□ -0.42
EPHB4-205ENST00000478459 TMEM250H0YL14 139 aa12.45□□□□□ -0.42
EPHB4-205ENST00000478459 TMEM243Q9BU79 118 aa12.45□□□□□ -0.42
EPHB4-205ENST00000478459 GFRA4Q9GZZ7 299 aa12.45□□□□□ -0.42
EPHB4-205ENST00000478459 LYPD6BQ8NI32 183 aa12.44□□□□□ -0.42
EPHB4-205ENST00000478459 SMIM7Q9BQ49 75 aa12.44□□□□□ -0.42
EPHB4-205ENST00000478459 IGKV3OR2-268A0A0C4DH90 116 aa12.43□□□□□ -0.42
EPHB4-205ENST00000478459 AMTP48728 403 aa12.43□□□□□ -0.42
EPHB4-205ENST00000478459 PKIAP61925 76 aa12.43□□□□□ -0.42
EPHB4-205ENST00000478459 REG3AQ06141 175 aa12.43□□□□□ -0.42
EPHB4-205ENST00000478459 MIAQ16674 131 aa12.43□□□□□ -0.42
EPHB4-205ENST00000478459 C20orf203Q8NBC4 194 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms