RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 DNAJC30Q96LL9 226 aa14.49□□□□□ -0.09
LIME1-203ENST00000465591 KIF25-AS1Q9Y6Z4 181 aa14.49□□□□□ -0.09
LIME1-203ENST00000465591 IGLC6P0CF74 106 aa14.48□□□□□ -0.09
LIME1-203ENST00000465591 XGP55808 180 aa14.48□□□□□ -0.09
LIME1-203ENST00000465591 OR2D3Q8NGH3 330 aa14.47□□□□□ -0.09
LIME1-203ENST00000465591 SMIM7Q9BQ49 75 aa14.47□□□□□ -0.09
LIME1-203ENST00000465591 FAT1Q14517 4588 aa14.47□□□□□ -0.09
LIME1-203ENST00000465591 Q8N814 137 aa14.46□□□□□ -0.09
LIME1-203ENST00000465591 ZNF727A8MUV8 499 aa14.45□□□□□ -0.1
LIME1-203ENST00000465591 FAM74A3Q4VXF1 159 aa14.45□□□□□ -0.1
LIME1-203ENST00000465591 FER1L6-AS1Q8NA97 138 aa14.45□□□□□ -0.1
LIME1-203ENST00000465591 OCC1Q8TAD7 63 aa14.45□□□□□ -0.1
LIME1-203ENST00000465591 TPPP3Q9BW30 176 aa14.45□□□□□ -0.1
LIME1-203ENST00000465591 DNAH8Q96JB1 4490 aa14.45□□□□□ -0.1
LIME1-203ENST00000465591 GCSHP23434 173 aa14.44□□□□□ -0.1
LIME1-203ENST00000465591 TM2D2Q9BX73 214 aa14.44□□□□□ -0.1
LIME1-203ENST00000465591 IGLV5-52A0A0A0MRZ9 124 aa14.43□□□□□ -0.1
LIME1-203ENST00000465591 TRAV8-3A0A0A6YYJ7 113 aa14.43□□□□□ -0.1
LIME1-203ENST00000465591 F5H697 171 aa14.43□□□□□ -0.1
LIME1-203ENST00000465591 RPS20P60866 119 aaKnown RBP14.43□□□□□ -0.1
LIME1-203ENST00000465591 AP1S3Q96PC3 154 aa14.43□□□□□ -0.1
LIME1-203ENST00000465591 KLK12Q9UKR0 248 aa14.43□□□□□ -0.1
LIME1-203ENST00000465591 TRBV6-8A0A0A6YYG3 113 aa14.42□□□□□ -0.1
LIME1-203ENST00000465591 LECT2O14960 151 aa14.42□□□□□ -0.1
LIME1-203ENST00000465591 P01737 135 aa14.42□□□□□ -0.1
LIME1-203ENST00000465591 SRSF3P84103 164 aaKnown RBP14.42□□□□□ -0.1
LIME1-203ENST00000465591 URGCP-MRPS24S4R325 110 aa14.42□□□□□ -0.1
LIME1-203ENST00000465591 C9JQL5 133 aa14.41□□□□□ -0.1
LIME1-203ENST00000465591 NTN5Q8WTR8 489 aaPredicted RBP14.41□□□□□ -0.1
LIME1-203ENST00000465591 XKRY2A2RUG3 117 aa14.4□□□□□ -0.1
LIME1-203ENST00000465591 K7EN84 100 aa14.4□□□□□ -0.1
LIME1-203ENST00000465591 SMIM17P0DL12 118 aa14.4□□□□□ -0.1
LIME1-203ENST00000465591 TMEM241Q24JQ0 296 aa14.4□□□□□ -0.1
LIME1-203ENST00000465591 NTM-AS1Q6ZSK4 140 aa14.4□□□□□ -0.1
LIME1-203ENST00000465591 NUDT10Q8NFP7 164 aa14.4□□□□□ -0.1
LIME1-203ENST00000465591 NUDT11Q96G61 164 aa14.4□□□□□ -0.1
LIME1-203ENST00000465591 A0A087WX48 190 aa14.39□□□□□ -0.11
LIME1-203ENST00000465591 HAMPP81172 84 aa14.39□□□□□ -0.11
LIME1-203ENST00000465591 LYZL1Q6UWQ5 148 aa14.39□□□□□ -0.11
LIME1-203ENST00000465591 UBE2WQ96B02 151 aa14.39□□□□□ -0.11
LIME1-203ENST00000465591 CHCHD7Q9BUK0 85 aa14.39□□□□□ -0.11
LIME1-203ENST00000465591 M0QY20 66 aa14.38□□□□□ -0.11
LIME1-203ENST00000465591 MGPP08493 103 aa14.38□□□□□ -0.11
LIME1-203ENST00000465591 CACNG7P62955 275 aa14.38□□□□□ -0.11
LIME1-203ENST00000465591 BAALCQ8WXS3 180 aa14.38□□□□□ -0.11
LIME1-203ENST00000465591 MPV17L2Q567V2 206 aa14.37□□□□□ -0.11
LIME1-203ENST00000465591 SUMO4Q6EEV6 95 aa14.37□□□□□ -0.11
LIME1-203ENST00000465591 LINC01551Q86U37 167 aa14.37□□□□□ -0.11
LIME1-203ENST00000465591 RNASE7Q9H1E1 156 aaKnown RBP14.37□□□□□ -0.11
LIME1-203ENST00000465591 NAT8Q9UHE5 227 aa14.37□□□□□ -0.11
LIME1-203ENST00000465591 IGKV2D-24A0A075B6R9 120 aa14.36□□□□□ -0.11
LIME1-203ENST00000465591 TMEM262E9PQX1 116 aa14.36□□□□□ -0.11
LIME1-203ENST00000465591 FAM231DQ6ZW35 169 aa14.36□□□□□ -0.11
LIME1-203ENST00000465591 F2Z2F3 143 aa14.35□□□□□ -0.11
LIME1-203ENST00000465591 GATCO43716 136 aaKnown RBP14.35□□□□□ -0.11
LIME1-203ENST00000465591 CTRLP40313 264 aa14.35□□□□□ -0.11
LIME1-203ENST00000465591 RPP21Q9H633 154 aaKnown RBP14.35□□□□□ -0.11
LIME1-203ENST00000465591 FAM30AQ9NZY2 134 aa14.35□□□□□ -0.11
LIME1-203ENST00000465591 NTF3P20783 257 aa14.34□□□□□ -0.11
LIME1-203ENST00000465591 ATRAIDQ6UW56 229 aa14.34□□□□□ -0.11
LIME1-203ENST00000465591 UQCC3Q6UW78 93 aa14.34□□□□□ -0.11
LIME1-203ENST00000465591 ENHOQ6UWT2 76 aa14.34□□□□□ -0.11
LIME1-203ENST00000465591 CHCHD5Q9BSY4 110 aa14.34□□□□□ -0.11
LIME1-203ENST00000465591 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.33□□□□□ -0.12
LIME1-203ENST00000465591 EPM2AB3EWF7 344 aa14.33□□□□□ -0.12
LIME1-203ENST00000465591 ELOBQ15370 118 aa14.33□□□□□ -0.12
LIME1-203ENST00000465591 KCNIP4Q6PIL6 250 aa14.33□□□□□ -0.12
LIME1-203ENST00000465591 C15orf54Q8N8G6 183 aa14.33□□□□□ -0.12
LIME1-203ENST00000465591 Q8N976 141 aa14.33□□□□□ -0.12
LIME1-203ENST00000465591 RMI2Q96E14 147 aa14.33□□□□□ -0.12
LIME1-203ENST00000465591 COX11Q9Y6N1 276 aa14.33□□□□□ -0.12
LIME1-203ENST00000465591 SMR3BP02814 79 aaPredicted RBP14.32□□□□□ -0.12
LIME1-203ENST00000465591 RPL23P62829 140 aaKnown RBP14.32□□□□□ -0.12
LIME1-203ENST00000465591 ADIRFQ15847 76 aa14.32□□□□□ -0.12
LIME1-203ENST00000465591 CNFNQ9BYD5 112 aa14.32□□□□□ -0.12
LIME1-203ENST00000465591 OSTCQ9NRP0 149 aa14.32□□□□□ -0.12
LIME1-203ENST00000465591 VPS13BQ7Z7G8 4022 aa14.31□□□□□ -0.12
LIME1-203ENST00000465591 A8MWL6 223 aa14.31□□□□□ -0.12
LIME1-203ENST00000465591 TRGC1P0CF51 173 aa14.31□□□□□ -0.12
LIME1-203ENST00000465591 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.31□□□□□ -0.12
LIME1-203ENST00000465591 GTSF1Q8WW33 167 aa14.31□□□□□ -0.12
LIME1-203ENST00000465591 TMEM70Q9BUB7 260 aa14.31□□□□□ -0.12
LIME1-203ENST00000465591 DPH3P1Q9H4G8 78 aa14.31□□□□□ -0.12
LIME1-203ENST00000465591 ANGP03950 147 aaKnown RBP14.3□□□□□ -0.12
LIME1-203ENST00000465591 GAGE6Q13070 117 aa14.3□□□□□ -0.12
LIME1-203ENST00000465591 CT83Q5H943 113 aa14.3□□□□□ -0.12
LIME1-203ENST00000465591 WDR73Q6P4I2 378 aa14.3□□□□□ -0.12
LIME1-203ENST00000465591 ISOC2Q96AB3 205 aa14.3□□□□□ -0.12
LIME1-203ENST00000465591 H7C1H1 209 aa14.29□□□□□ -0.12
LIME1-203ENST00000465591 Q0VG73 95 aa14.29□□□□□ -0.12
LIME1-203ENST00000465591 IQCJQ1A5X6 159 aa14.29□□□□□ -0.12
LIME1-203ENST00000465591 LINC01620Q4KN68 170 aa14.29□□□□□ -0.12
LIME1-203ENST00000465591 TMEM97Q5BJF2 176 aa14.29□□□□□ -0.12
LIME1-203ENST00000465591 Q5VSD8 79 aa14.29□□□□□ -0.12
LIME1-203ENST00000465591 RASL11AQ6T310 242 aa14.29□□□□□ -0.12
LIME1-203ENST00000465591 COMMD7Q86VX2 200 aa14.29□□□□□ -0.12
LIME1-203ENST00000465591 DEFB104AQ8WTQ1 72 aa14.29□□□□□ -0.12
LIME1-203ENST00000465591 TRBV25-1A0A075B6N4 114 aa14.28□□□□□ -0.12
LIME1-203ENST00000465591 LINC00862A6NCI5 91 aa14.28□□□□□ -0.12
LIME1-203ENST00000465591 RBX1P62877 108 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms