RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 SMIM17P0DL12 118 aa12.54□□□□□ -0.4
COL5A1-203ENST00000460264 TAGLN2P37802 199 aaKnown RBP12.54□□□□□ -0.4
COL5A1-203ENST00000460264 DNAJC30Q96LL9 226 aa12.54□□□□□ -0.4
COL5A1-203ENST00000460264 KLK12Q9UKR0 248 aa12.54□□□□□ -0.4
COL5A1-203ENST00000460264 P01737 135 aa12.53□□□□□ -0.4
COL5A1-203ENST00000460264 RMI2Q96E14 147 aa12.52□□□□□ -0.41
COL5A1-203ENST00000460264 BIN3Q9NQY0 253 aa12.52□□□□□ -0.41
COL5A1-203ENST00000460264 COX11Q9Y6N1 276 aa12.52□□□□□ -0.41
COL5A1-203ENST00000460264 XKRY2A2RUG3 117 aa12.51□□□□□ -0.41
COL5A1-203ENST00000460264 LECT2O14960 151 aa12.51□□□□□ -0.41
COL5A1-203ENST00000460264 CACNG7P62955 275 aa12.51□□□□□ -0.41
COL5A1-203ENST00000460264 ELOBQ15370 118 aa12.51□□□□□ -0.41
COL5A1-203ENST00000460264 KCNIP4Q6PIL6 250 aa12.51□□□□□ -0.41
COL5A1-203ENST00000460264 UBE2WQ96B02 151 aa12.51□□□□□ -0.41
COL5A1-203ENST00000460264 IGKV2D-24A0A075B6R9 120 aa12.5□□□□□ -0.41
COL5A1-203ENST00000460264 EPM2AB3EWF7 344 aa12.5□□□□□ -0.41
COL5A1-203ENST00000460264 ALKAL2Q6UX46 152 aa12.5□□□□□ -0.41
COL5A1-203ENST00000460264 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.5□□□□□ -0.41
COL5A1-203ENST00000460264 TMEM70Q9BUB7 260 aa12.5□□□□□ -0.41
COL5A1-203ENST00000460264 F2Z2F3 143 aa12.49□□□□□ -0.41
COL5A1-203ENST00000460264 M0QY20 66 aa12.49□□□□□ -0.41
COL5A1-203ENST00000460264 MGPP08493 103 aa12.49□□□□□ -0.41
COL5A1-203ENST00000460264 MPV17L2Q567V2 206 aa12.49□□□□□ -0.41
COL5A1-203ENST00000460264 ATRAIDQ6UW56 229 aa12.49□□□□□ -0.41
COL5A1-203ENST00000460264 BAALCQ8WXS3 180 aa12.49□□□□□ -0.41
COL5A1-203ENST00000460264 TMEM262E9PQX1 116 aa12.48□□□□□ -0.41
COL5A1-203ENST00000460264 CTRLP40313 264 aa12.48□□□□□ -0.41
COL5A1-203ENST00000460264 LYZL1Q6UWQ5 148 aa12.48□□□□□ -0.41
COL5A1-203ENST00000460264 NTM-AS1Q6ZSK4 140 aa12.48□□□□□ -0.41
COL5A1-203ENST00000460264 NUDT10Q8NFP7 164 aa12.48□□□□□ -0.41
COL5A1-203ENST00000460264 NUDT11Q96G61 164 aa12.48□□□□□ -0.41
COL5A1-203ENST00000460264 CHCHD5Q9BSY4 110 aa12.48□□□□□ -0.41
COL5A1-203ENST00000460264 K7EN84 100 aa12.47□□□□□ -0.41
COL5A1-203ENST00000460264 HAMPP81172 84 aa12.47□□□□□ -0.41
COL5A1-203ENST00000460264 TMEM97Q5BJF2 176 aa12.47□□□□□ -0.41
COL5A1-203ENST00000460264 SUMO4Q6EEV6 95 aa12.47□□□□□ -0.41
COL5A1-203ENST00000460264 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.46□□□□□ -0.41
COL5A1-203ENST00000460264 H7C1H1 209 aa12.46□□□□□ -0.41
COL5A1-203ENST00000460264 TRGC1P0CF51 173 aa12.46□□□□□ -0.41
COL5A1-203ENST00000460264 PKIAP61925 76 aa12.46□□□□□ -0.41
COL5A1-203ENST00000460264 BLOC1S1P78537 153 aa12.46□□□□□ -0.41
COL5A1-203ENST00000460264 Q0VG73 95 aa12.46□□□□□ -0.41
COL5A1-203ENST00000460264 Q5VSD8 79 aa12.46□□□□□ -0.41
COL5A1-203ENST00000460264 C15orf54Q8N8G6 183 aa12.46□□□□□ -0.41
COL5A1-203ENST00000460264 RPP21Q9H633 154 aaKnown RBP12.46□□□□□ -0.41
COL5A1-203ENST00000460264 TMEM250H0YL14 139 aa12.45□□□□□ -0.42
COL5A1-203ENST00000460264 NTF3P20783 257 aa12.45□□□□□ -0.42
COL5A1-203ENST00000460264 ENHOQ6UWT2 76 aa12.45□□□□□ -0.42
COL5A1-203ENST00000460264 LYPD6BQ8NI32 183 aa12.45□□□□□ -0.42
COL5A1-203ENST00000460264 OCC1Q8TAD7 63 aa12.45□□□□□ -0.42
COL5A1-203ENST00000460264 FRZBQ92765 325 aa12.45□□□□□ -0.42
COL5A1-203ENST00000460264 CNFNQ9BYD5 112 aa12.45□□□□□ -0.42
COL5A1-203ENST00000460264 RNASE7Q9H1E1 156 aaKnown RBP12.45□□□□□ -0.42
COL5A1-203ENST00000460264 FAM30AQ9NZY2 134 aa12.45□□□□□ -0.42
COL5A1-203ENST00000460264 CRPP02741 224 aa12.44□□□□□ -0.42
COL5A1-203ENST00000460264 ANGP03950 147 aaKnown RBP12.44□□□□□ -0.42
COL5A1-203ENST00000460264 WDR73Q6P4I2 378 aa12.44□□□□□ -0.42
COL5A1-203ENST00000460264 Q8N976 141 aa12.44□□□□□ -0.42
COL5A1-203ENST00000460264 C1orf43Q9BWL3 253 aa12.44□□□□□ -0.42
COL5A1-203ENST00000460264 DPH3P1Q9H4G8 78 aa12.44□□□□□ -0.42
COL5A1-203ENST00000460264 TRBV25-1A0A075B6N4 114 aa12.43□□□□□ -0.42
COL5A1-203ENST00000460264 SMR3BP02814 79 aaPredicted RBP12.43□□□□□ -0.42
COL5A1-203ENST00000460264 IQCJQ1A5X6 159 aa12.43□□□□□ -0.42
COL5A1-203ENST00000460264 RASL11AQ6T310 242 aa12.43□□□□□ -0.42
COL5A1-203ENST00000460264 NKX2-5P52952 324 aaPredicted RBP12.42□□□□□ -0.42
COL5A1-203ENST00000460264 Q6ZSA8 131 aa12.42□□□□□ -0.42
COL5A1-203ENST00000460264 IGHV1-24A0A0C4DH33 117 aa12.41□□□□□ -0.42
COL5A1-203ENST00000460264 RBX1P62877 108 aa12.41□□□□□ -0.42
COL5A1-203ENST00000460264 GAGE6Q13070 117 aa12.41□□□□□ -0.42
COL5A1-203ENST00000460264 SRRM2Q9UQ35 2752 aaKnown RBP12.41□□□□□ -0.42
COL5A1-203ENST00000460264 FAT1Q14517 4588 aa12.41□□□□□ -0.42
COL5A1-203ENST00000460264 VPS13BQ7Z7G8 4022 aa12.4□□□□□ -0.42
COL5A1-203ENST00000460264 TWIST1Q15672 202 aa12.4□□□□□ -0.42
COL5A1-203ENST00000460264 GTSF1Q8WW33 167 aa12.4□□□□□ -0.42
COL5A1-203ENST00000460264 NIT2Q9NQR4 276 aa12.4□□□□□ -0.42
COL5A1-203ENST00000460264 PRR34Q9NV39 138 aa12.4□□□□□ -0.42
COL5A1-203ENST00000460264 MIAQ16674 131 aa12.39□□□□□ -0.43
COL5A1-203ENST00000460264 LINC01620Q4KN68 170 aa12.39□□□□□ -0.43
COL5A1-203ENST00000460264 A0A1B0GVG6 124 aa12.38□□□□□ -0.43
COL5A1-203ENST00000460264 CEBPGP53567 150 aa12.38□□□□□ -0.43
COL5A1-203ENST00000460264 CLPSL2Q6UWE3 100 aa12.38□□□□□ -0.43
COL5A1-203ENST00000460264 FAM231DQ6ZW35 169 aa12.38□□□□□ -0.43
COL5A1-203ENST00000460264 HLA-DQA1P01909 254 aa12.37□□□□□ -0.43
COL5A1-203ENST00000460264 INAFM2P0DMQ5 153 aa12.37□□□□□ -0.43
COL5A1-203ENST00000460264 LINC00269Q8N2A0 174 aa12.37□□□□□ -0.43
COL5A1-203ENST00000460264 PGLYRP4Q96LB8 373 aa12.37□□□□□ -0.43
COL5A1-203ENST00000460264 TMEM243Q9BU79 118 aa12.37□□□□□ -0.43
COL5A1-203ENST00000460264 DNAH8Q96JB1 4490 aa12.37□□□□□ -0.43
COL5A1-203ENST00000460264 FAM229AH3BQW9 127 aa12.36□□□□□ -0.43
COL5A1-203ENST00000460264 GATCO43716 136 aaKnown RBP12.36□□□□□ -0.43
COL5A1-203ENST00000460264 C14orf177Q52M58 125 aa12.36□□□□□ -0.43
COL5A1-203ENST00000460264 GATD1Q8NB37 220 aa12.36□□□□□ -0.43
COL5A1-203ENST00000460264 TRAV26-2A0A0B4J265 109 aa12.35□□□□□ -0.43
COL5A1-203ENST00000460264 USP17L23D6RBM5 183 aa12.35□□□□□ -0.43
COL5A1-203ENST00000460264 NDUFS6O75380 124 aaKnown RBP12.35□□□□□ -0.43
COL5A1-203ENST00000460264 FAM210AQ96ND0 272 aa12.35□□□□□ -0.43
COL5A1-203ENST00000460264 SMIM7Q9BQ49 75 aa12.35□□□□□ -0.43
COL5A1-203ENST00000460264 EIF5A2Q9GZV4 153 aaKnown RBP12.35□□□□□ -0.43
COL5A1-203ENST00000460264 A8MWL6 223 aa12.34□□□□□ -0.43
COL5A1-203ENST00000460264 CT83Q5H943 113 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms