RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 SNAI2O43623 268 aa6.66□□□□□ -1.34
HDLBP-227ENST00000458564 RBX1P62877 108 aa6.66□□□□□ -1.34
HDLBP-227ENST00000458564 NTM-AS1Q6ZSK4 140 aa6.66□□□□□ -1.34
HDLBP-227ENST00000458564 OR10AG1Q8NH19 301 aa6.66□□□□□ -1.34
HDLBP-227ENST00000458564 SSBP4Q9BWG4 385 aaPredicted RBP6.66□□□□□ -1.34
HDLBP-227ENST00000458564 OR5AL1P0C617 328 aa6.65□□□□□ -1.34
HDLBP-227ENST00000458564 Q5BKY6 102 aa6.65□□□□□ -1.34
HDLBP-227ENST00000458564 AKR1C8PQ5T2L2 129 aa6.65□□□□□ -1.34
HDLBP-227ENST00000458564 LINC00269Q8N2A0 174 aa6.65□□□□□ -1.34
HDLBP-227ENST00000458564 INO80EQ8NBZ0 244 aaPredicted RBP6.65□□□□□ -1.34
HDLBP-227ENST00000458564 RNF185Q96GF1 192 aa6.65□□□□□ -1.34
HDLBP-227ENST00000458564 ZNF471Q9BX82 626 aaPredicted RBP6.65□□□□□ -1.34
HDLBP-227ENST00000458564 TRBV25-1A0A075B6N4 114 aa6.64□□□□□ -1.35
HDLBP-227ENST00000458564 MAP1LC3B2A6NCE7 125 aa6.64□□□□□ -1.35
HDLBP-227ENST00000458564 GIPP09681 153 aaPredicted RBP6.64□□□□□ -1.35
HDLBP-227ENST00000458564 IQCJQ1A5X6 159 aa6.64□□□□□ -1.35
HDLBP-227ENST00000458564 CLPSL2Q6UWE3 100 aa6.64□□□□□ -1.35
HDLBP-227ENST00000458564 MAP1LC3BQ9GZQ8 125 aa6.64□□□□□ -1.35
HDLBP-227ENST00000458564 AKR1C3P42330 323 aa6.63□□□□□ -1.35
HDLBP-227ENST00000458564 REG3AQ06141 175 aa6.63□□□□□ -1.35
HDLBP-227ENST00000458564 GAGE6Q13070 117 aa6.63□□□□□ -1.35
HDLBP-227ENST00000458564 DERL1Q9BUN8 251 aa6.63□□□□□ -1.35
HDLBP-227ENST00000458564 MLST8Q9BVC4 326 aa6.63□□□□□ -1.35
HDLBP-227ENST00000458564 MED28Q9H204 178 aa6.63□□□□□ -1.35
HDLBP-227ENST00000458564 KIF25-AS1Q9Y6Z4 181 aa6.63□□□□□ -1.35
HDLBP-227ENST00000458564 IGHV3-64A0A075B6Q5 118 aa6.62□□□□□ -1.35
HDLBP-227ENST00000458564 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.62□□□□□ -1.35
HDLBP-227ENST00000458564 TRAV8-4A0A0B4J246 113 aa6.62□□□□□ -1.35
HDLBP-227ENST00000458564 A6NHS1 94 aa6.62□□□□□ -1.35
HDLBP-227ENST00000458564 P01737 135 aa6.62□□□□□ -1.35
HDLBP-227ENST00000458564 S100A9P06702 114 aaKnown RBP6.62□□□□□ -1.35
HDLBP-227ENST00000458564 SPANXN1Q5VSR9 72 aa6.62□□□□□ -1.35
HDLBP-227ENST00000458564 CST9LP1Q5W188 147 aa6.62□□□□□ -1.35
HDLBP-227ENST00000458564 STOML3Q8TAV4 291 aa6.62□□□□□ -1.35
HDLBP-227ENST00000458564 SPACA4Q8TDM5 124 aa6.62□□□□□ -1.35
HDLBP-227ENST00000458564 AP1S3Q96PC3 154 aa6.62□□□□□ -1.35
HDLBP-227ENST00000458564 A0A087WYN8 130 aa6.61□□□□□ -1.35
HDLBP-227ENST00000458564 FXYD6-FXYD2A0A087WZ82 144 aa6.61□□□□□ -1.35
HDLBP-227ENST00000458564 IGHV1-24A0A0C4DH33 117 aa6.61□□□□□ -1.35
HDLBP-227ENST00000458564 A0A1B0GUV1 79 aa6.61□□□□□ -1.35
HDLBP-227ENST00000458564 hDV102S1A0JD36 115 aa6.61□□□□□ -1.35
HDLBP-227ENST00000458564 F5H697 171 aa6.61□□□□□ -1.35
HDLBP-227ENST00000458564 GZMBP10144 247 aa6.61□□□□□ -1.35
HDLBP-227ENST00000458564 C20orf203Q8NBC4 194 aa6.61□□□□□ -1.35
HDLBP-227ENST00000458564 PLAC8Q9NZF1 115 aa6.61□□□□□ -1.35
HDLBP-227ENST00000458564 IGLV10-54A0A075B6I4 117 aa6.6□□□□□ -1.35
HDLBP-227ENST00000458564 M0QY20 66 aa6.6□□□□□ -1.35
HDLBP-227ENST00000458564 PAGE4O60829 102 aa6.6□□□□□ -1.35
HDLBP-227ENST00000458564 SLPIP03973 132 aa6.6□□□□□ -1.35
HDLBP-227ENST00000458564 SMIM17P0DL12 118 aa6.6□□□□□ -1.35
HDLBP-227ENST00000458564 AP5S1Q9NUS5 200 aa6.6□□□□□ -1.35
HDLBP-227ENST00000458564 MUC21A0A0G2JKD1 596 aa6.59□□□□□ -1.35
HDLBP-227ENST00000458564 MUC21A0A140T8X8 626 aa6.59□□□□□ -1.35
HDLBP-227ENST00000458564 SCO2A0A1W2PP80 73 aa6.59□□□□□ -1.35
HDLBP-227ENST00000458564 G3V3Q6 166 aa6.59□□□□□ -1.35
HDLBP-227ENST00000458564 H7C1H1 209 aa6.59□□□□□ -1.35
HDLBP-227ENST00000458564 CHTF8P0CG12 524 aa6.59□□□□□ -1.35
HDLBP-227ENST00000458564 BAGE2Q86Y30 109 aa6.59□□□□□ -1.35
HDLBP-227ENST00000458564 CYTL1Q9NRR1 136 aa6.59□□□□□ -1.35
HDLBP-227ENST00000458564 IGLV4-60A0A075B6I1 120 aa6.58□□□□□ -1.36
HDLBP-227ENST00000458564 PHOX2AO14813 284 aa6.58□□□□□ -1.36
HDLBP-227ENST00000458564 C7orf33Q8WU49 177 aa6.58□□□□□ -1.36
HDLBP-227ENST00000458564 PGLYRP4Q96LB8 373 aa6.58□□□□□ -1.36
HDLBP-227ENST00000458564 LINC01600Q96MT4 127 aa6.58□□□□□ -1.36
HDLBP-227ENST00000458564 TMEM243Q9BU79 118 aa6.58□□□□□ -1.36
HDLBP-227ENST00000458564 GFRA4Q9GZZ7 299 aa6.58□□□□□ -1.36
HDLBP-227ENST00000458564 PFDN1O60925 122 aa6.57□□□□□ -1.36
HDLBP-227ENST00000458564 IGLC6P0CF74 106 aa6.57□□□□□ -1.36
HDLBP-227ENST00000458564 SUMO4Q6EEV6 95 aa6.57□□□□□ -1.36
HDLBP-227ENST00000458564 C15orf56Q8N910 161 aa6.57□□□□□ -1.36
HDLBP-227ENST00000458564 MBD3L1Q8WWY6 194 aa6.57□□□□□ -1.36
HDLBP-227ENST00000458564 UMAD1C9J7I0 102 aa6.56□□□□□ -1.36
HDLBP-227ENST00000458564 PRR3P79522 188 aaKnown RBP6.56□□□□□ -1.36
HDLBP-227ENST00000458564 WDR73Q6P4I2 378 aa6.56□□□□□ -1.36
HDLBP-227ENST00000458564 SFT2D1Q8WV19 159 aa6.56□□□□□ -1.36
HDLBP-227ENST00000458564 DPH3Q96FX2 82 aa6.56□□□□□ -1.36
HDLBP-227ENST00000458564 ARPC5O15511 151 aa6.55□□□□□ -1.36
HDLBP-227ENST00000458564 NDUFS6O75380 124 aaKnown RBP6.55□□□□□ -1.36
HDLBP-227ENST00000458564 MGPP08493 103 aa6.55□□□□□ -1.36
HDLBP-227ENST00000458564 NKX2-5P52952 324 aaPredicted RBP6.55□□□□□ -1.36
HDLBP-227ENST00000458564 SSTP61278 116 aa6.55□□□□□ -1.36
HDLBP-227ENST00000458564 CACNG7P62955 275 aa6.55□□□□□ -1.36
HDLBP-227ENST00000458564 COX6A2Q02221 97 aa6.55□□□□□ -1.36
HDLBP-227ENST00000458564 CFAP161Q6P656 301 aa6.55□□□□□ -1.36
HDLBP-227ENST00000458564 RASL11AQ6T310 242 aa6.55□□□□□ -1.36
HDLBP-227ENST00000458564 TMUB2Q71RG4 321 aa6.55□□□□□ -1.36
HDLBP-227ENST00000458564 FER1L6-AS1Q8NA97 138 aa6.55□□□□□ -1.36
HDLBP-227ENST00000458564 DPH3P1Q9H4G8 78 aa6.55□□□□□ -1.36
HDLBP-227ENST00000458564 RPL35P42766 123 aaKnown RBP6.54□□□□□ -1.36
HDLBP-227ENST00000458564 RPS10P46783 165 aaKnown RBP6.54□□□□□ -1.36
HDLBP-227ENST00000458564 RPS20P60866 119 aaKnown RBP6.54□□□□□ -1.36
HDLBP-227ENST00000458564 FAM213BQ8TBF2 198 aa6.54□□□□□ -1.36
HDLBP-227ENST00000458564 C11orf52Q96A22 123 aa6.54□□□□□ -1.36
HDLBP-227ENST00000458564 NIT2Q9NQR4 276 aa6.54□□□□□ -1.36
HDLBP-227ENST00000458564 GVQW2A0A096LPI5 108 aaPredicted RBP6.53□□□□□ -1.36
HDLBP-227ENST00000458564 A0A0J9YXV3 536 aa6.53□□□□□ -1.36
HDLBP-227ENST00000458564 F2Z2F3 143 aa6.53□□□□□ -1.36
HDLBP-227ENST00000458564 UBE2L6O14933 153 aa6.53□□□□□ -1.36
HDLBP-227ENST00000458564 TRGC1P0CF51 173 aa6.53□□□□□ -1.36
HDLBP-227ENST00000458564 SULT1A2P50226 295 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms