RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 RAB19A4D1S5 217 aa16.53■□□□□ 0.24
HLA-C-204ENST00000415537 IGLV2-8P01709 118 aa16.53■□□□□ 0.24
HLA-C-204ENST00000415537 C1QBP02746 253 aa16.53■□□□□ 0.24
HLA-C-204ENST00000415537 SMR3BP02814 79 aaPredicted RBP16.53■□□□□ 0.24
HLA-C-204ENST00000415537 FER1L6-AS1Q8NA97 138 aa16.53■□□□□ 0.24
HLA-C-204ENST00000415537 XKRY2A2RUG3 117 aa16.52■□□□□ 0.24
HLA-C-204ENST00000415537 RBFOX3A6NFN3 312 aa16.52■□□□□ 0.24
HLA-C-204ENST00000415537 GZMBP10144 247 aa16.52■□□□□ 0.24
HLA-C-204ENST00000415537 HAMPP81172 84 aa16.52■□□□□ 0.24
HLA-C-204ENST00000415537 Q0VG73 95 aa16.52■□□□□ 0.24
HLA-C-204ENST00000415537 BIN3Q9NQY0 253 aa16.52■□□□□ 0.24
HLA-C-204ENST00000415537 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.51■□□□□ 0.23
HLA-C-204ENST00000415537 DNAJC30Q96LL9 226 aa16.51■□□□□ 0.23
HLA-C-204ENST00000415537 C19orf71A6NCJ1 209 aa16.5■□□□□ 0.23
HLA-C-204ENST00000415537 P01737 135 aa16.5■□□□□ 0.23
HLA-C-204ENST00000415537 BCL2P10415 239 aa16.5■□□□□ 0.23
HLA-C-204ENST00000415537 TMEM97Q5BJF2 176 aa16.5■□□□□ 0.23
HLA-C-204ENST00000415537 VAX2Q9UIW0 290 aa16.5■□□□□ 0.23
HLA-C-204ENST00000415537 KIF25-AS1Q9Y6Z4 181 aa16.5■□□□□ 0.23
HLA-C-204ENST00000415537 FAM229AH3BQW9 127 aa16.49■□□□□ 0.23
HLA-C-204ENST00000415537 MGPP08493 103 aa16.49■□□□□ 0.23
HLA-C-204ENST00000415537 IGLC6P0CF74 106 aa16.49■□□□□ 0.23
HLA-C-204ENST00000415537 INAFM2P0DMQ5 153 aa16.49■□□□□ 0.23
HLA-C-204ENST00000415537 PKIAP61925 76 aa16.49■□□□□ 0.23
HLA-C-204ENST00000415537 CACNG7P62955 275 aa16.49■□□□□ 0.23
HLA-C-204ENST00000415537 Q8N976 141 aa16.49■□□□□ 0.23
HLA-C-204ENST00000415537 CHCHD5Q9BSY4 110 aa16.49■□□□□ 0.23
HLA-C-204ENST00000415537 CRPP02741 224 aa16.48■□□□□ 0.23
HLA-C-204ENST00000415537 TAGLN2P37802 199 aaKnown RBP16.48■□□□□ 0.23
HLA-C-204ENST00000415537 F2Z2F3 143 aa16.47■□□□□ 0.23
HLA-C-204ENST00000415537 C15orf54Q8N8G6 183 aa16.47■□□□□ 0.23
HLA-C-204ENST00000415537 H7C1H1 209 aa16.46■□□□□ 0.23
HLA-C-204ENST00000415537 ANGP03950 147 aaKnown RBP16.46■□□□□ 0.23
HLA-C-204ENST00000415537 MPV17L2Q567V2 206 aa16.46■□□□□ 0.23
HLA-C-204ENST00000415537 ATRAIDQ6UW56 229 aa16.46■□□□□ 0.23
HLA-C-204ENST00000415537 Q6ZNX1 250 aa16.46■□□□□ 0.23
HLA-C-204ENST00000415537 C1orf43Q9BWL3 253 aa16.46■□□□□ 0.23
HLA-C-204ENST00000415537 FAM30AQ9NZY2 134 aa16.46■□□□□ 0.23
HLA-C-204ENST00000415537 TRBV20OR9-2A0A075B6H5 130 aa16.45■□□□□ 0.22
HLA-C-204ENST00000415537 TRBV25-1A0A075B6N4 114 aa16.44■□□□□ 0.22
HLA-C-204ENST00000415537 AKAP14Q86UN6 197 aa16.44■□□□□ 0.22
HLA-C-204ENST00000415537 FAT1Q14517 4588 aa16.43■□□□□ 0.22
HLA-C-204ENST00000415537 TRGC1P0CF51 173 aa16.43■□□□□ 0.22
HLA-C-204ENST00000415537 LYZL1Q6UWQ5 148 aa16.43■□□□□ 0.22
HLA-C-204ENST00000415537 ENHOQ6UWT2 76 aa16.43■□□□□ 0.22
HLA-C-204ENST00000415537 NTM-AS1Q6ZSK4 140 aa16.43■□□□□ 0.22
HLA-C-204ENST00000415537 M0QY20 66 aa16.42■□□□□ 0.22
HLA-C-204ENST00000415537 SUMO4Q6EEV6 95 aa16.42■□□□□ 0.22
HLA-C-204ENST00000415537 NUDT10Q8NFP7 164 aa16.41■□□□□ 0.22
HLA-C-204ENST00000415537 NUDT11Q96G61 164 aa16.41■□□□□ 0.22
HLA-C-204ENST00000415537 NTF3P20783 257 aa16.4■□□□□ 0.22
HLA-C-204ENST00000415537 C14orf177Q52M58 125 aa16.4■□□□□ 0.22
HLA-C-204ENST00000415537 C9orf62Q8N4C0 152 aa16.4■□□□□ 0.22
HLA-C-204ENST00000415537 DPH3P1Q9H4G8 78 aa16.4■□□□□ 0.22
HLA-C-204ENST00000415537 hCG_2014768A0A024R1R8 64 aa16.39■□□□□ 0.21
HLA-C-204ENST00000415537 GAGE6Q13070 117 aa16.39■□□□□ 0.21
HLA-C-204ENST00000415537 MIAQ16674 131 aa16.39■□□□□ 0.21
HLA-C-204ENST00000415537 IGHV1-24A0A0C4DH33 117 aa16.38■□□□□ 0.21
HLA-C-204ENST00000415537 BLOC1S1P78537 153 aa16.38■□□□□ 0.21
HLA-C-204ENST00000415537 LINC01620Q4KN68 170 aa16.38■□□□□ 0.21
HLA-C-204ENST00000415537 RASL11AQ6T310 242 aa16.38■□□□□ 0.21
HLA-C-204ENST00000415537 Q6ZSA8 131 aa16.38■□□□□ 0.21
HLA-C-204ENST00000415537 NKX2-5P52952 324 aaPredicted RBP16.37■□□□□ 0.21
HLA-C-204ENST00000415537 RBX1P62877 108 aa16.37■□□□□ 0.21
HLA-C-204ENST00000415537 IQCJQ1A5X6 159 aa16.37■□□□□ 0.21
HLA-C-204ENST00000415537 WDR73Q6P4I2 378 aa16.37■□□□□ 0.21
HLA-C-204ENST00000415537 ALKAL2Q6UX46 152 aa16.37■□□□□ 0.21
HLA-C-204ENST00000415537 RPP21Q9H633 154 aaKnown RBP16.37■□□□□ 0.21
HLA-C-204ENST00000415537 HLA-DQA1P01909 254 aa16.36■□□□□ 0.21
HLA-C-204ENST00000415537 TWIST1Q15672 202 aa16.36■□□□□ 0.21
HLA-C-204ENST00000415537 OCC1Q8TAD7 63 aa16.36■□□□□ 0.21
HLA-C-204ENST00000415537 RNASE7Q9H1E1 156 aaKnown RBP16.36■□□□□ 0.21
HLA-C-204ENST00000415537 CTRLP40313 264 aa16.35■□□□□ 0.21
HLA-C-204ENST00000415537 LINC00269Q8N2A0 174 aa16.35■□□□□ 0.21
HLA-C-204ENST00000415537 NIT2Q9NQR4 276 aa16.35■□□□□ 0.21
HLA-C-204ENST00000415537 DNAH8Q96JB1 4490 aa16.35■□□□□ 0.21
HLA-C-204ENST00000415537 K7EN84 100 aa16.34■□□□□ 0.21
HLA-C-204ENST00000415537 CLPSL2Q6UWE3 100 aa16.34■□□□□ 0.21
HLA-C-204ENST00000415537 PRR34Q9NV39 138 aa16.33■□□□□ 0.2
HLA-C-204ENST00000415537 TMEM250H0YL14 139 aa16.32■□□□□ 0.2
HLA-C-204ENST00000415537 TMEM243Q9BU79 118 aa16.32■□□□□ 0.2
HLA-C-204ENST00000415537 CNFNQ9BYD5 112 aa16.31■□□□□ 0.2
HLA-C-204ENST00000415537 VPS13BQ7Z7G8 4022 aa16.31■□□□□ 0.2
HLA-C-204ENST00000415537 USP17L23D6RBM5 183 aa16.3■□□□□ 0.2
HLA-C-204ENST00000415537 PLA2G1BP04054 148 aaKnown RBP16.3■□□□□ 0.2
HLA-C-204ENST00000415537 SMIM15Q7Z3B0 74 aa16.3■□□□□ 0.2
HLA-C-204ENST00000415537 PGLYRP4Q96LB8 373 aa16.3■□□□□ 0.2
HLA-C-204ENST00000415537 UBE2L6O14933 153 aa16.29■□□□□ 0.2
HLA-C-204ENST00000415537 CEBPGP53567 150 aa16.29■□□□□ 0.2
HLA-C-204ENST00000415537 REG3AQ06141 175 aa16.29■□□□□ 0.2
HLA-C-204ENST00000415537 LINC00528Q8N1L1 170 aa16.29■□□□□ 0.2
HLA-C-204ENST00000415537 GATCO43716 136 aaKnown RBP16.28■□□□□ 0.2
HLA-C-204ENST00000415537 COTL1Q14019 142 aa16.28■□□□□ 0.2
HLA-C-204ENST00000415537 SCXQ7RTU7 201 aa16.28■□□□□ 0.2
HLA-C-204ENST00000415537 LYPD6BQ8NI32 183 aa16.28■□□□□ 0.2
HLA-C-204ENST00000415537 A0A1B0GUV1 79 aa16.27■□□□□ 0.2
HLA-C-204ENST00000415537 DEFB104AQ8WTQ1 72 aa16.27■□□□□ 0.2
HLA-C-204ENST00000415537 SRRM2Q9UQ35 2752 aaKnown RBP16.27■□□□□ 0.2
HLA-C-204ENST00000415537 AMTP48728 403 aa16.26■□□□□ 0.19
HLA-C-204ENST00000415537 GATD1Q8NB37 220 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms