RNA–Protein interactions for RNA: ENST00000413358.6

HCG18-234, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 916 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-234ENST00000413358 PPP1R17O96001 155 aa6.29□□□□□ -1.4
HCG18-234ENST00000413358 P0DMU3 169 aa6.29□□□□□ -1.4
HCG18-234ENST00000413358 FAM231AP0DMU4 169 aa6.29□□□□□ -1.4
HCG18-234ENST00000413358 FAM231CP0DMU5 169 aa6.29□□□□□ -1.4
HCG18-234ENST00000413358 CRYBA4P53673 196 aa6.29□□□□□ -1.4
HCG18-234ENST00000413358 RPL36AP83881 106 aaKnown RBP6.29□□□□□ -1.4
HCG18-234ENST00000413358 KIAA1644Q3SXP7 199 aa6.29□□□□□ -1.4
HCG18-234ENST00000413358 SLC25A29Q8N8R3 303 aa6.29□□□□□ -1.4
HCG18-234ENST00000413358 PHLDA1Q8WV24 401 aaPredicted RBP6.29□□□□□ -1.4
HCG18-234ENST00000413358 RPL36ALQ969Q0 106 aaKnown RBP6.29□□□□□ -1.4
HCG18-234ENST00000413358 PRELID3AQ96N28 172 aa6.29□□□□□ -1.4
HCG18-234ENST00000413358 BIRC6Q9NR09 4857 aa6.28□□□□□ -1.4
HCG18-234ENST00000413358 GAGE12JA6NER3 117 aa6.28□□□□□ -1.4
HCG18-234ENST00000413358 M0QY20 66 aa6.28□□□□□ -1.4
HCG18-234ENST00000413358 TRGC2P03986 189 aa6.28□□□□□ -1.4
HCG18-234ENST00000413358 GYPEP15421 78 aa6.28□□□□□ -1.4
HCG18-234ENST00000413358 SRIP30626 198 aa6.28□□□□□ -1.4
HCG18-234ENST00000413358 GAGE1Q13065 139 aa6.28□□□□□ -1.4
HCG18-234ENST00000413358 GAGE4Q13068 117 aa6.28□□□□□ -1.4
HCG18-234ENST00000413358 GAGE5Q13069 117 aa6.28□□□□□ -1.4
HCG18-234ENST00000413358 GAGE13Q4V321 117 aa6.28□□□□□ -1.4
HCG18-234ENST00000413358 Q6ZSN1 163 aa6.28□□□□□ -1.4
HCG18-234ENST00000413358 RPL39LQ96EH5 51 aaKnown RBP6.28□□□□□ -1.4
HCG18-234ENST00000413358 LAMTOR2Q9Y2Q5 125 aa6.28□□□□□ -1.4
HCG18-234ENST00000413358 TNFRSF18Q9Y5U5 241 aa6.28□□□□□ -1.4
HCG18-234ENST00000413358 ICOSQ9Y6W8 199 aa6.28□□□□□ -1.4
HCG18-234ENST00000413358 LOC100131303A0A0U1RQF7 123 aa6.27□□□□□ -1.41
HCG18-234ENST00000413358 NUPR2A6NF83 97 aa6.27□□□□□ -1.41
HCG18-234ENST00000413358 NPYP01303 97 aa6.27□□□□□ -1.41
HCG18-234ENST00000413358 NEXN-AS1Q8NBZ9 246 aa6.27□□□□□ -1.41
HCG18-234ENST00000413358 DNAJC30Q96LL9 226 aa6.27□□□□□ -1.41
HCG18-234ENST00000413358 MAP1LC3AQ9H492 121 aa6.27□□□□□ -1.41
HCG18-234ENST00000413358 ST20Q9HBF5 79 aa6.27□□□□□ -1.41
HCG18-234ENST00000413358 NIT2Q9NQR4 276 aa6.27□□□□□ -1.41
HCG18-234ENST00000413358 KLK5Q9Y337 293 aaPredicted RBP6.27□□□□□ -1.41
HCG18-234ENST00000413358 TRBV7-3A0A075B6L6 115 aa6.26□□□□□ -1.41
HCG18-234ENST00000413358 IGLL5B9A064 214 aa6.26□□□□□ -1.41
HCG18-234ENST00000413358 PHOX2AO14813 284 aa6.26□□□□□ -1.41
HCG18-234ENST00000413358 GAS8-AS1O95177 125 aa6.26□□□□□ -1.41
HCG18-234ENST00000413358 TNFRSF6BO95407 300 aa6.26□□□□□ -1.41
HCG18-234ENST00000413358 NUDT3O95989 172 aa6.26□□□□□ -1.41
HCG18-234ENST00000413358 NRACQ8N912 160 aa6.26□□□□□ -1.41
HCG18-234ENST00000413358 C15orf53Q8NAA6 179 aa6.26□□□□□ -1.41
HCG18-234ENST00000413358 ZNRF2Q8NHG8 242 aa6.26□□□□□ -1.41
HCG18-234ENST00000413358 LINC00476Q8WZB0 136 aa6.26□□□□□ -1.41
HCG18-234ENST00000413358 TRBV6-5A0A0K0K1A5 114 aa6.25□□□□□ -1.41
HCG18-234ENST00000413358 SDHAF1A6NFY7 115 aa6.25□□□□□ -1.41
HCG18-234ENST00000413358 C1orf196B1AJZ1 125 aa6.25□□□□□ -1.41
HCG18-234ENST00000413358 H3BNG1 76 aa6.25□□□□□ -1.41
HCG18-234ENST00000413358 SUMO2P61956 95 aaKnown RBP6.25□□□□□ -1.41
HCG18-234ENST00000413358 MRPL23Q16540 153 aaKnown RBP6.25□□□□□ -1.41
HCG18-234ENST00000413358 CEMP1Q6PRD7 247 aaPredicted RBP6.25□□□□□ -1.41
HCG18-234ENST00000413358 VSIG2Q96IQ7 327 aa6.25□□□□□ -1.41
HCG18-234ENST00000413358 C20orf78Q9BR46 151 aa6.25□□□□□ -1.41
HCG18-234ENST00000413358 ALKBH7Q9BT30 221 aaPredicted RBP6.25□□□□□ -1.41
HCG18-234ENST00000413358 SMIM2Q9BVW6 85 aa6.25□□□□□ -1.41
HCG18-234ENST00000413358 A0A096LPF7 62 aa6.24□□□□□ -1.41
HCG18-234ENST00000413358 IGHV3-38A0A0C4DH36 116 aa6.24□□□□□ -1.41
HCG18-234ENST00000413358 LOC389332A0A1B0GUA5 103 aa6.24□□□□□ -1.41
HCG18-234ENST00000413358 PMCHP20382 165 aa6.24□□□□□ -1.41
HCG18-234ENST00000413358 UBE2D3P61077 147 aa6.24□□□□□ -1.41
HCG18-234ENST00000413358 UBE2D2P62837 147 aa6.24□□□□□ -1.41
HCG18-234ENST00000413358 NEGR1Q7Z3B1 354 aa6.24□□□□□ -1.41
HCG18-234ENST00000413358 SH2D6Q7Z4S9 175 aa6.24□□□□□ -1.41
HCG18-234ENST00000413358 ATP6V0E2Q8NHE4 81 aa6.24□□□□□ -1.41
HCG18-234ENST00000413358 KIR2DL4Q99706 377 aa6.24□□□□□ -1.41
HCG18-234ENST00000413358 TMEM70Q9BUB7 260 aa6.24□□□□□ -1.41
HCG18-234ENST00000413358 Q9UF83 564 aa6.24□□□□□ -1.41
HCG18-234ENST00000413358 EPPK1P58107 5090 aaKnown RBP6.24□□□□□ -1.41
HCG18-234ENST00000413358 LINC00694P0DN24 101 aa6.23□□□□□ -1.41
HCG18-234ENST00000413358 FCER1GP30273 86 aa6.23□□□□□ -1.41
HCG18-234ENST00000413358 RAB5BP61020 215 aa6.23□□□□□ -1.41
HCG18-234ENST00000413358 COTL1Q14019 142 aa6.23□□□□□ -1.41
HCG18-234ENST00000413358 IQCJQ1A5X6 159 aa6.23□□□□□ -1.41
HCG18-234ENST00000413358 FA2HQ7L5A8 372 aa6.23□□□□□ -1.41
HCG18-234ENST00000413358 DAZ4Q86SG3 579 aaKnown RBP6.23□□□□□ -1.41
HCG18-234ENST00000413358 PRSS3P2Q8NHM4 247 aa6.23□□□□□ -1.41
HCG18-234ENST00000413358 C18orf32Q8TCD1 76 aa6.23□□□□□ -1.41
HCG18-234ENST00000413358 NXT2Q9NPJ8 142 aaKnown RBP6.23□□□□□ -1.41
HCG18-234ENST00000413358 DAZ3Q9NR90 486 aaKnown RBP6.23□□□□□ -1.41
HCG18-234ENST00000413358 I3L3M4 83 aa6.22□□□□□ -1.41
HCG18-234ENST00000413358 VCYO14598 125 aa6.22□□□□□ -1.41
HCG18-234ENST00000413358 RPL32P62910 135 aaKnown RBP6.22□□□□□ -1.41
HCG18-234ENST00000413358 TMEM97Q5BJF2 176 aa6.22□□□□□ -1.41
HCG18-234ENST00000413358 BAGE3Q86Y29 109 aa6.22□□□□□ -1.41
HCG18-234ENST00000413358 DYNC2H1Q8NCM8 4307 aaKnown RBP6.21□□□□□ -1.41
HCG18-234ENST00000413358 TRBV27A0A0K0K1C4 114 aa6.21□□□□□ -1.42
HCG18-234ENST00000413358 TCAPO15273 167 aa6.21□□□□□ -1.42
HCG18-234ENST00000413358 HIST1H2BKO60814 126 aa6.21□□□□□ -1.42
HCG18-234ENST00000413358 HIST1H2BJP06899 126 aa6.21□□□□□ -1.42
HCG18-234ENST00000413358 HIST1H2BOP23527 126 aa6.21□□□□□ -1.42
HCG18-234ENST00000413358 HIST1H2BBP33778 126 aa6.21□□□□□ -1.42
HCG18-234ENST00000413358 IFI27P40305 119 aaPredicted RBP6.21□□□□□ -1.42
HCG18-234ENST00000413358 AMTP48728 403 aa6.21□□□□□ -1.42
HCG18-234ENST00000413358 POLR2KP53803 58 aaKnown RBP6.21□□□□□ -1.42
HCG18-234ENST00000413358 HIST1H2BDP58876 126 aa6.21□□□□□ -1.42
HCG18-234ENST00000413358 HIST1H2BCP62807 126 aa6.21□□□□□ -1.42
HCG18-234ENST00000413358 HIST2H2BEQ16778 126 aa6.21□□□□□ -1.42
HCG18-234ENST00000413358 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.21□□□□□ -1.42
HCG18-234ENST00000413358 RNASEKQ6P5S7 137 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms