RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 IBTKQ9P2D0 1353 aaPredicted RBP0.56□□□□□ -2.32
RNU2-28P-201ENST00000410457 ABCA12Q86UK0 2595 aa0.55□□□□□ -2.32
RNU2-28P-201ENST00000410457 CLPSL1A2RUU4 121 aa0.55□□□□□ -2.32
RNU2-28P-201ENST00000410457 HIST1H1DP16402 221 aaKnown RBP0.55□□□□□ -2.32
RNU2-28P-201ENST00000410457 EDDM3BP56851 147 aa0.55□□□□□ -2.32
RNU2-28P-201ENST00000410457 CCL8P80075 99 aa0.55□□□□□ -2.32
RNU2-28P-201ENST00000410457 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
RNU2-28P-201ENST00000410457 SPTSSBQ8NFR3 76 aa0.55□□□□□ -2.32
RNU2-28P-201ENST00000410457 SEC11CQ9BY50 192 aa0.55□□□□□ -2.32
RNU2-28P-201ENST00000410457 AGPAT4-IT1Q9H0P7 198 aa0.55□□□□□ -2.32
RNU2-28P-201ENST00000410457 PIEZO1Q92508 2521 aa0.55□□□□□ -2.32
RNU2-28P-201ENST00000410457 F8P00451 2351 aa0.54□□□□□ -2.32
RNU2-28P-201ENST00000410457 TRBV10-3A0A0K0K1G6 114 aa0.54□□□□□ -2.32
RNU2-28P-201ENST00000410457 GNG7O60262 68 aa0.54□□□□□ -2.32
RNU2-28P-201ENST00000410457 RERGLQ9H628 205 aa0.54□□□□□ -2.32
RNU2-28P-201ENST00000410457 SCP2D1Q9UJQ7 156 aa0.54□□□□□ -2.32
RNU2-28P-201ENST00000410457 IFT140Q96RY7 1462 aa0.54□□□□□ -2.32
RNU2-28P-201ENST00000410457 SPEF2Q9C093 1822 aa0.53□□□□□ -2.32
RNU2-28P-201ENST00000410457 FAM25AB3EWG3 89 aa0.53□□□□□ -2.32
RNU2-28P-201ENST00000410457 FAM25CB3EWG5 89 aa0.53□□□□□ -2.32
RNU2-28P-201ENST00000410457 FAM25GB3EWG6 89 aa0.53□□□□□ -2.32
RNU2-28P-201ENST00000410457 APOC4-APOC2K7ER74 178 aa0.53□□□□□ -2.32
RNU2-28P-201ENST00000410457 APODP05090 189 aa0.53□□□□□ -2.32
RNU2-28P-201ENST00000410457 BTG2P78543 158 aa0.53□□□□□ -2.32
RNU2-28P-201ENST00000410457 SARNPP82979 210 aaKnown RBP0.53□□□□□ -2.32
RNU2-28P-201ENST00000410457 S100A7L2Q5SY68 101 aa0.53□□□□□ -2.32
RNU2-28P-201ENST00000410457 PROK2Q9HC23 129 aa0.53□□□□□ -2.32
RNU2-28P-201ENST00000410457 CFTRP13569 1480 aa0.53□□□□□ -2.33
RNU2-28P-201ENST00000410457 POLQO75417 2590 aa0.52□□□□□ -2.33
RNU2-28P-201ENST00000410457 ARFGEF1Q9Y6D6 1849 aa0.52□□□□□ -2.33
RNU2-28P-201ENST00000410457 PIGBOS1A0A0B4J2F0 54 aa0.52□□□□□ -2.33
RNU2-28P-201ENST00000410457 ACYP2P14621 99 aa0.52□□□□□ -2.33
RNU2-28P-201ENST00000410457 C12orf73Q69YU5 71 aa0.52□□□□□ -2.33
RNU2-28P-201ENST00000410457 WFDC6Q9BQY6 131 aa0.52□□□□□ -2.33
RNU2-28P-201ENST00000410457 SERP1Q9Y6X1 66 aa0.52□□□□□ -2.33
RNU2-28P-201ENST00000410457 LAMC3Q9Y6N6 1575 aa0.52□□□□□ -2.33
RNU2-28P-201ENST00000410457 MYH7P12883 1935 aa0.52□□□□□ -2.33
RNU2-28P-201ENST00000410457 AHNAKQ09666 5890 aaKnown RBP0.52□□□□□ -2.33
RNU2-28P-201ENST00000410457 TRGV1A0A0A0MS02 117 aa0.51□□□□□ -2.33
RNU2-28P-201ENST00000410457 SSC5DA1L4H1 1573 aa0.51□□□□□ -2.33
RNU2-28P-201ENST00000410457 EFCAB10A6NFE3 127 aa0.51□□□□□ -2.33
RNU2-28P-201ENST00000410457 TMEM14DPA8MWL7 114 aa0.51□□□□□ -2.33
RNU2-28P-201ENST00000410457 MEIG1Q5JSS6 88 aa0.51□□□□□ -2.33
RNU2-28P-201ENST00000410457 SPINK6Q6UWN8 80 aa0.51□□□□□ -2.33
RNU2-28P-201ENST00000410457 PTPRZ1P23471 2315 aaPredicted RBP0.5□□□□□ -2.33
RNU2-28P-201ENST00000410457 FOCADQ5VW36 1801 aa0.5□□□□□ -2.33
RNU2-28P-201ENST00000410457 NAIPQ13075 1403 aa0.5□□□□□ -2.33
RNU2-28P-201ENST00000410457 SIX6O95475 246 aa0.5□□□□□ -2.33
RNU2-28P-201ENST00000410457 INSL4Q14641 139 aa0.5□□□□□ -2.33
RNU2-28P-201ENST00000410457 Q6AWC8 147 aa0.5□□□□□ -2.33
RNU2-28P-201ENST00000410457 Q6ZRX8 168 aa0.5□□□□□ -2.33
RNU2-28P-201ENST00000410457 LSM10Q969L4 123 aaKnown RBP0.5□□□□□ -2.33
RNU2-28P-201ENST00000410457 NAA60Q9H7X0 242 aa0.5□□□□□ -2.33
RNU2-28P-201ENST00000410457 LINC00312Q9Y6C7 94 aa0.5□□□□□ -2.33
RNU2-28P-201ENST00000410457 SIPA1L3O60292 1781 aaPredicted RBP0.5□□□□□ -2.33
RNU2-28P-201ENST00000410457 PHLPP1O60346 1717 aa0.5□□□□□ -2.33
RNU2-28P-201ENST00000410457 LRRC37A3O60309 1634 aa0.49□□□□□ -2.33
RNU2-28P-201ENST00000410457 FGF7P21781 194 aa0.49□□□□□ -2.33
RNU2-28P-201ENST00000410457 Q5VV11 94 aa0.49□□□□□ -2.33
RNU2-28P-201ENST00000410457 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.49□□□□□ -2.33
RNU2-28P-201ENST00000410457 SPAARA0A1B0GVQ0 90 aa0.48□□□□□ -2.33
RNU2-28P-201ENST00000410457 Q8N8P6 123 aa0.48□□□□□ -2.33
RNU2-28P-201ENST00000410457 ZFYVE26Q68DK2 2539 aa0.48□□□□□ -2.33
RNU2-28P-201ENST00000410457 BCL9LQ86UU0 1499 aa0.48□□□□□ -2.33
RNU2-28P-201ENST00000410457 PXDNQ92626 1479 aa0.48□□□□□ -2.33
RNU2-28P-201ENST00000410457 CASKIN1Q8WXD9 1431 aa0.47□□□□□ -2.33
RNU2-28P-201ENST00000410457 PI4KAP42356 2102 aa0.47□□□□□ -2.33
RNU2-28P-201ENST00000410457 IGF2RP11717 2491 aa0.47□□□□□ -2.33
RNU2-28P-201ENST00000410457 NWD2Q9ULI1 1742 aa0.47□□□□□ -2.33
RNU2-28P-201ENST00000410457 TRAV13-2A0A0B4J235 113 aa0.47□□□□□ -2.33
RNU2-28P-201ENST00000410457 HCG22E2RYF7 251 aa0.47□□□□□ -2.33
RNU2-28P-201ENST00000410457 RPL13AP3Q6NVV1 102 aa0.47□□□□□ -2.33
RNU2-28P-201ENST00000410457 MBD5Q9P267 1494 aa0.47□□□□□ -2.33
RNU2-28P-201ENST00000410457 UNC13BO14795 1591 aa0.46□□□□□ -2.34
RNU2-28P-201ENST00000410457 NMBP08949 121 aa0.46□□□□□ -2.34
RNU2-28P-201ENST00000410457 GCHFRP30047 84 aa0.46□□□□□ -2.34
RNU2-28P-201ENST00000410457 RBM3P98179 157 aaKnown RBP0.46□□□□□ -2.34
RNU2-28P-201ENST00000410457 Q56UQ5 140 aa0.46□□□□□ -2.34
RNU2-28P-201ENST00000410457 TRAV1-2A0A0B4J238 106 aa0.45□□□□□ -2.34
RNU2-28P-201ENST00000410457 SMIM6P0DI80 62 aa0.45□□□□□ -2.34
RNU2-28P-201ENST00000410457 BAGE3Q86Y29 109 aa0.45□□□□□ -2.34
RNU2-28P-201ENST00000410457 ASXL3Q9C0F0 2248 aa0.45□□□□□ -2.34
RNU2-28P-201ENST00000410457 ZMYM4Q5VZL5 1548 aa0.44□□□□□ -2.34
RNU2-28P-201ENST00000410457 LOC100130705A0A1B0GUX0 176 aa0.44□□□□□ -2.34
RNU2-28P-201ENST00000410457 AQP10Q96PS8 301 aa0.44□□□□□ -2.34
RNU2-28P-201ENST00000410457 ROCK2O75116 1388 aaKnown RBP0.44□□□□□ -2.34
RNU2-28P-201ENST00000410457 GOLGA3Q08378 1498 aa0.43□□□□□ -2.34
RNU2-28P-201ENST00000410457 MUC5ACP98088 5654 aa0.43□□□□□ -2.34
RNU2-28P-201ENST00000410457 COX6A2Q02221 97 aa0.43□□□□□ -2.34
RNU2-28P-201ENST00000410457 PPP3R2Q96LZ3 170 aa0.43□□□□□ -2.34
RNU2-28P-201ENST00000410457 PATJQ8NI35 1801 aa0.43□□□□□ -2.34
RNU2-28P-201ENST00000410457 FAM208BQ5VWN6 2430 aa0.43□□□□□ -2.34
RNU2-28P-201ENST00000410457 MYH8P13535 1937 aa0.42□□□□□ -2.34
RNU2-28P-201ENST00000410457 PHGR1C9JFL3 82 aa0.42□□□□□ -2.34
RNU2-28P-201ENST00000410457 G3V318 75 aa0.42□□□□□ -2.34
RNU2-28P-201ENST00000410457 APOC2P02655 101 aa0.42□□□□□ -2.34
RNU2-28P-201ENST00000410457 CCL18P55774 89 aa0.42□□□□□ -2.34
RNU2-28P-201ENST00000410457 C10orf128Q5T292 105 aa0.42□□□□□ -2.34
RNU2-28P-201ENST00000410457 PP6455Q8WZ26 134 aa0.42□□□□□ -2.34
RNU2-28P-201ENST00000410457 CACNA1CQ13936 2221 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms