RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 NUDT10Q8NFP7 164 aa11.74□□□□□ -0.53
LSM5-204ENST00000409909 NUDT11Q96G61 164 aa11.74□□□□□ -0.53
LSM5-204ENST00000409909 KLK12Q9UKR0 248 aa11.74□□□□□ -0.53
LSM5-204ENST00000409909 IGLV5-52A0A0A0MRZ9 124 aa11.73□□□□□ -0.53
LSM5-204ENST00000409909 A0A1B0GVG6 124 aa11.73□□□□□ -0.53
LSM5-204ENST00000409909 K7EN84 100 aa11.73□□□□□ -0.53
LSM5-204ENST00000409909 SMIM17P0DL12 118 aa11.73□□□□□ -0.53
LSM5-204ENST00000409909 LYZL1Q6UWQ5 148 aa11.73□□□□□ -0.53
LSM5-204ENST00000409909 OCC1Q8TAD7 63 aa11.73□□□□□ -0.53
LSM5-204ENST00000409909 NTN5Q8WTR8 489 aaPredicted RBP11.73□□□□□ -0.53
LSM5-204ENST00000409909 BIN3Q9NQY0 253 aa11.73□□□□□ -0.53
LSM5-204ENST00000409909 DNAH8Q96JB1 4490 aa11.72□□□□□ -0.53
LSM5-204ENST00000409909 A0A087WX48 190 aa11.72□□□□□ -0.53
LSM5-204ENST00000409909 NKX2-5P52952 324 aaPredicted RBP11.72□□□□□ -0.53
LSM5-204ENST00000409909 CACNG7P62955 275 aa11.72□□□□□ -0.53
LSM5-204ENST00000409909 BLOC1S1P78537 153 aa11.72□□□□□ -0.53
LSM5-204ENST00000409909 NTM-AS1Q6ZSK4 140 aa11.72□□□□□ -0.53
LSM5-204ENST00000409909 LYPD6BQ8NI32 183 aa11.72□□□□□ -0.53
LSM5-204ENST00000409909 CHCHD7Q9BUK0 85 aa11.72□□□□□ -0.53
LSM5-204ENST00000409909 XKRY2A2RUG3 117 aa11.71□□□□□ -0.53
LSM5-204ENST00000409909 F2Z2F3 143 aa11.71□□□□□ -0.53
LSM5-204ENST00000409909 M0QY20 66 aa11.71□□□□□ -0.53
LSM5-204ENST00000409909 LECT2O14960 151 aa11.71□□□□□ -0.53
LSM5-204ENST00000409909 RNASE7Q9H1E1 156 aaKnown RBP11.71□□□□□ -0.53
LSM5-204ENST00000409909 TMEM262E9PQX1 116 aa11.7□□□□□ -0.54
LSM5-204ENST00000409909 MGPP08493 103 aa11.7□□□□□ -0.54
LSM5-204ENST00000409909 NTF3P20783 257 aa11.7□□□□□ -0.54
LSM5-204ENST00000409909 SUMO4Q6EEV6 95 aa11.7□□□□□ -0.54
LSM5-204ENST00000409909 BAALCQ8WXS3 180 aa11.7□□□□□ -0.54
LSM5-204ENST00000409909 UBE2WQ96B02 151 aa11.7□□□□□ -0.54
LSM5-204ENST00000409909 COX11Q9Y6N1 276 aa11.69□□□□□ -0.54
LSM5-204ENST00000409909 IGKV2D-24A0A075B6R9 120 aa11.68□□□□□ -0.54
LSM5-204ENST00000409909 TMEM250H0YL14 139 aa11.68□□□□□ -0.54
LSM5-204ENST00000409909 CTRLP40313 264 aa11.68□□□□□ -0.54
LSM5-204ENST00000409909 ELOBQ15370 118 aa11.68□□□□□ -0.54
LSM5-204ENST00000409909 MPV17L2Q567V2 206 aa11.68□□□□□ -0.54
LSM5-204ENST00000409909 KCNIP4Q6PIL6 250 aa11.68□□□□□ -0.54
LSM5-204ENST00000409909 RMI2Q96E14 147 aa11.68□□□□□ -0.54
LSM5-204ENST00000409909 RPP21Q9H633 154 aaKnown RBP11.68□□□□□ -0.54
LSM5-204ENST00000409909 SRRM2Q9UQ35 2752 aaKnown RBP11.67□□□□□ -0.54
LSM5-204ENST00000409909 WDR73Q6P4I2 378 aa11.67□□□□□ -0.54
LSM5-204ENST00000409909 ATRAIDQ6UW56 229 aa11.67□□□□□ -0.54
LSM5-204ENST00000409909 ENHOQ6UWT2 76 aa11.67□□□□□ -0.54
LSM5-204ENST00000409909 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.67□□□□□ -0.54
LSM5-204ENST00000409909 CHCHD5Q9BSY4 110 aa11.67□□□□□ -0.54
LSM5-204ENST00000409909 TRGC1P0CF51 173 aa11.66□□□□□ -0.54
LSM5-204ENST00000409909 HAMPP81172 84 aa11.66□□□□□ -0.54
LSM5-204ENST00000409909 C15orf54Q8N8G6 183 aa11.66□□□□□ -0.54
LSM5-204ENST00000409909 Q8N976 141 aa11.66□□□□□ -0.54
LSM5-204ENST00000409909 CNFNQ9BYD5 112 aa11.66□□□□□ -0.54
LSM5-204ENST00000409909 VPS13BQ7Z7G8 4022 aa11.66□□□□□ -0.54
LSM5-204ENST00000409909 H7C1H1 209 aa11.65□□□□□ -0.54
LSM5-204ENST00000409909 Q0VG73 95 aa11.65□□□□□ -0.54
LSM5-204ENST00000409909 TMEM97Q5BJF2 176 aa11.65□□□□□ -0.54
LSM5-204ENST00000409909 GTSF1Q8WW33 167 aa11.65□□□□□ -0.54
LSM5-204ENST00000409909 DPH3P1Q9H4G8 78 aa11.65□□□□□ -0.54
LSM5-204ENST00000409909 FAM30AQ9NZY2 134 aa11.65□□□□□ -0.54
LSM5-204ENST00000409909 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.64□□□□□ -0.55
LSM5-204ENST00000409909 EPM2AB3EWF7 344 aa11.64□□□□□ -0.55
LSM5-204ENST00000409909 TWIST1Q15672 202 aa11.64□□□□□ -0.55
LSM5-204ENST00000409909 RASL11AQ6T310 242 aa11.64□□□□□ -0.55
LSM5-204ENST00000409909 TMEM70Q9BUB7 260 aa11.64□□□□□ -0.55
LSM5-204ENST00000409909 TRBV25-1A0A075B6N4 114 aa11.63□□□□□ -0.55
LSM5-204ENST00000409909 SMR3BP02814 79 aaPredicted RBP11.63□□□□□ -0.55
LSM5-204ENST00000409909 ANGP03950 147 aaKnown RBP11.63□□□□□ -0.55
LSM5-204ENST00000409909 CEBPGP53567 150 aa11.63□□□□□ -0.55
LSM5-204ENST00000409909 GAGE6Q13070 117 aa11.63□□□□□ -0.55
LSM5-204ENST00000409909 IQCJQ1A5X6 159 aa11.63□□□□□ -0.55
LSM5-204ENST00000409909 PKIAP61925 76 aa11.62□□□□□ -0.55
LSM5-204ENST00000409909 RBX1P62877 108 aa11.62□□□□□ -0.55
LSM5-204ENST00000409909 FAM231DQ6ZW35 169 aa11.62□□□□□ -0.55
LSM5-204ENST00000409909 EIF5A2Q9GZV4 153 aaKnown RBP11.62□□□□□ -0.55
LSM5-204ENST00000409909 NIT2Q9NQR4 276 aa11.62□□□□□ -0.55
LSM5-204ENST00000409909 IGHV1-24A0A0C4DH33 117 aa11.61□□□□□ -0.55
LSM5-204ENST00000409909 GATCO43716 136 aaKnown RBP11.61□□□□□ -0.55
LSM5-204ENST00000409909 FOXA3P55318 350 aaPredicted RBP11.61□□□□□ -0.55
LSM5-204ENST00000409909 DEFB104AQ8WTQ1 72 aa11.61□□□□□ -0.55
LSM5-204ENST00000409909 FAM210AQ96ND0 272 aa11.61□□□□□ -0.55
LSM5-204ENST00000409909 C1orf43Q9BWL3 253 aa11.61□□□□□ -0.55
LSM5-204ENST00000409909 CRPP02741 224 aa11.6□□□□□ -0.55
LSM5-204ENST00000409909 LINC01620Q4KN68 170 aa11.6□□□□□ -0.55
LSM5-204ENST00000409909 Q5VSD8 79 aa11.6□□□□□ -0.55
LSM5-204ENST00000409909 GATD1Q8NB37 220 aa11.6□□□□□ -0.55
LSM5-204ENST00000409909 PRR34Q9NV39 138 aa11.6□□□□□ -0.55
LSM5-204ENST00000409909 TRAV26-2A0A0B4J265 109 aa11.59□□□□□ -0.55
LSM5-204ENST00000409909 NDUFS6O75380 124 aaKnown RBP11.59□□□□□ -0.55
LSM5-204ENST00000409909 SRP19P09132 144 aaKnown RBP11.59□□□□□ -0.55
LSM5-204ENST00000409909 LINC00269Q8N2A0 174 aa11.59□□□□□ -0.55
LSM5-204ENST00000409909 PGLYRP4Q96LB8 373 aa11.59□□□□□ -0.55
LSM5-204ENST00000409909 SMIM7Q9BQ49 75 aa11.59□□□□□ -0.55
LSM5-204ENST00000409909 A8MWL6 223 aa11.58□□□□□ -0.56
LSM5-204ENST00000409909 MIAQ16674 131 aa11.58□□□□□ -0.56
LSM5-204ENST00000409909 CLPSL2Q6UWE3 100 aa11.58□□□□□ -0.56
LSM5-204ENST00000409909 Q6ZSA8 131 aa11.58□□□□□ -0.56
LSM5-204ENST00000409909 LINC01551Q86U37 167 aa11.58□□□□□ -0.56
LSM5-204ENST00000409909 KRTAP26-1Q6PEX3 210 aa11.57□□□□□ -0.56
LSM5-204ENST00000409909 FRZBQ92765 325 aa11.57□□□□□ -0.56
LSM5-204ENST00000409909 TMEM243Q9BU79 118 aa11.57□□□□□ -0.56
LSM5-204ENST00000409909 ZNF727A8MUV8 499 aa11.56□□□□□ -0.56
LSM5-204ENST00000409909 CT83Q5H943 113 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms