RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 RBFOX3A6NFN3 312 aa13.01□□□□□ -0.33
TSPAN4-209ENST00000409543 P01737 135 aa13.01□□□□□ -0.33
TSPAN4-209ENST00000409543 ELOBQ15370 118 aa13.01□□□□□ -0.33
TSPAN4-209ENST00000409543 KCNIP4Q6PIL6 250 aa13.01□□□□□ -0.33
TSPAN4-209ENST00000409543 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.01□□□□□ -0.33
TSPAN4-209ENST00000409543 RMI2Q96E14 147 aa13.01□□□□□ -0.33
TSPAN4-209ENST00000409543 TPPP3Q9BW30 176 aa13.01□□□□□ -0.33
TSPAN4-209ENST00000409543 KLK12Q9UKR0 248 aa13.01□□□□□ -0.33
TSPAN4-209ENST00000409543 hCG_2014768A0A024R1R8 64 aa13□□□□□ -0.33
TSPAN4-209ENST00000409543 CACNG7P62955 275 aa13□□□□□ -0.33
TSPAN4-209ENST00000409543 F2Z2F3 143 aa12.99□□□□□ -0.33
TSPAN4-209ENST00000409543 WFDC2Q14508 124 aa12.99□□□□□ -0.33
TSPAN4-209ENST00000409543 EPM2AB3EWF7 344 aa12.97□□□□□ -0.33
TSPAN4-209ENST00000409543 TMEM262E9PQX1 116 aa12.97□□□□□ -0.33
TSPAN4-209ENST00000409543 BLOC1S1P78537 153 aa12.97□□□□□ -0.33
TSPAN4-209ENST00000409543 TMEM97Q5BJF2 176 aa12.97□□□□□ -0.33
TSPAN4-209ENST00000409543 NUDT10Q8NFP7 164 aa12.97□□□□□ -0.33
TSPAN4-209ENST00000409543 UBE2WQ96B02 151 aa12.97□□□□□ -0.33
TSPAN4-209ENST00000409543 NUDT11Q96G61 164 aa12.97□□□□□ -0.33
TSPAN4-209ENST00000409543 DNAJC30Q96LL9 226 aa12.97□□□□□ -0.33
TSPAN4-209ENST00000409543 TMEM70Q9BUB7 260 aa12.97□□□□□ -0.33
TSPAN4-209ENST00000409543 M0QY20 66 aa12.96□□□□□ -0.33
TSPAN4-209ENST00000409543 ATRAIDQ6UW56 229 aa12.96□□□□□ -0.33
TSPAN4-209ENST00000409543 ALKAL2Q6UX46 152 aa12.96□□□□□ -0.33
TSPAN4-209ENST00000409543 BAALCQ8WXS3 180 aa12.96□□□□□ -0.33
TSPAN4-209ENST00000409543 IGKV2D-24A0A075B6R9 120 aa12.95□□□□□ -0.34
TSPAN4-209ENST00000409543 H7C1H1 209 aa12.95□□□□□ -0.34
TSPAN4-209ENST00000409543 LECT2O14960 151 aa12.95□□□□□ -0.34
TSPAN4-209ENST00000409543 MGPP08493 103 aa12.95□□□□□ -0.34
TSPAN4-209ENST00000409543 PKIAP61925 76 aa12.95□□□□□ -0.34
TSPAN4-209ENST00000409543 Q0VG73 95 aa12.95□□□□□ -0.34
TSPAN4-209ENST00000409543 WDR73Q6P4I2 378 aa12.95□□□□□ -0.34
TSPAN4-209ENST00000409543 LYZL1Q6UWQ5 148 aa12.95□□□□□ -0.34
TSPAN4-209ENST00000409543 NTM-AS1Q6ZSK4 140 aa12.95□□□□□ -0.34
TSPAN4-209ENST00000409543 LYPD6BQ8NI32 183 aa12.94□□□□□ -0.34
TSPAN4-209ENST00000409543 OCC1Q8TAD7 63 aa12.94□□□□□ -0.34
TSPAN4-209ENST00000409543 CHCHD5Q9BSY4 110 aa12.94□□□□□ -0.34
TSPAN4-209ENST00000409543 TMEM250H0YL14 139 aa12.93□□□□□ -0.34
TSPAN4-209ENST00000409543 K7EN84 100 aa12.93□□□□□ -0.34
TSPAN4-209ENST00000409543 TRGC1P0CF51 173 aa12.93□□□□□ -0.34
TSPAN4-209ENST00000409543 NTF3P20783 257 aa12.93□□□□□ -0.34
TSPAN4-209ENST00000409543 CTRLP40313 264 aa12.93□□□□□ -0.34
TSPAN4-209ENST00000409543 MPV17L2Q567V2 206 aa12.93□□□□□ -0.34
TSPAN4-209ENST00000409543 SUMO4Q6EEV6 95 aa12.93□□□□□ -0.34
TSPAN4-209ENST00000409543 Q8N976 141 aa12.93□□□□□ -0.34
TSPAN4-209ENST00000409543 ENHOQ6UWT2 76 aa12.92□□□□□ -0.34
TSPAN4-209ENST00000409543 C15orf54Q8N8G6 183 aa12.92□□□□□ -0.34
TSPAN4-209ENST00000409543 RNASE7Q9H1E1 156 aaKnown RBP12.92□□□□□ -0.34
TSPAN4-209ENST00000409543 RPP21Q9H633 154 aaKnown RBP12.92□□□□□ -0.34
TSPAN4-209ENST00000409543 FAT1Q14517 4588 aa12.92□□□□□ -0.34
TSPAN4-209ENST00000409543 TRBV25-1A0A075B6N4 114 aa12.91□□□□□ -0.34
TSPAN4-209ENST00000409543 ANGP03950 147 aaKnown RBP12.91□□□□□ -0.34
TSPAN4-209ENST00000409543 FRZBQ92765 325 aa12.91□□□□□ -0.34
TSPAN4-209ENST00000409543 CNFNQ9BYD5 112 aa12.91□□□□□ -0.34
TSPAN4-209ENST00000409543 DPH3P1Q9H4G8 78 aa12.91□□□□□ -0.34
TSPAN4-209ENST00000409543 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.9□□□□□ -0.34
TSPAN4-209ENST00000409543 CRPP02741 224 aa12.9□□□□□ -0.34
TSPAN4-209ENST00000409543 IQCJQ1A5X6 159 aa12.9□□□□□ -0.34
TSPAN4-209ENST00000409543 RASL11AQ6T310 242 aa12.9□□□□□ -0.34
TSPAN4-209ENST00000409543 C1orf43Q9BWL3 253 aa12.9□□□□□ -0.34
TSPAN4-209ENST00000409543 TWIST1Q15672 202 aa12.89□□□□□ -0.35
TSPAN4-209ENST00000409543 Q5VSD8 79 aa12.89□□□□□ -0.35
TSPAN4-209ENST00000409543 FAM30AQ9NZY2 134 aa12.89□□□□□ -0.35
TSPAN4-209ENST00000409543 IGHV1-24A0A0C4DH33 117 aa12.88□□□□□ -0.35
TSPAN4-209ENST00000409543 SMR3BP02814 79 aaPredicted RBP12.88□□□□□ -0.35
TSPAN4-209ENST00000409543 NKX2-5P52952 324 aaPredicted RBP12.88□□□□□ -0.35
TSPAN4-209ENST00000409543 HAMPP81172 84 aa12.88□□□□□ -0.35
TSPAN4-209ENST00000409543 NIT2Q9NQR4 276 aa12.88□□□□□ -0.35
TSPAN4-209ENST00000409543 RBX1P62877 108 aa12.87□□□□□ -0.35
TSPAN4-209ENST00000409543 GAGE6Q13070 117 aa12.87□□□□□ -0.35
TSPAN4-209ENST00000409543 MIAQ16674 131 aa12.87□□□□□ -0.35
TSPAN4-209ENST00000409543 PRR34Q9NV39 138 aa12.87□□□□□ -0.35
TSPAN4-209ENST00000409543 DNAH8Q96JB1 4490 aa12.87□□□□□ -0.35
TSPAN4-209ENST00000409543 Q6ZSA8 131 aa12.86□□□□□ -0.35
TSPAN4-209ENST00000409543 FAM231DQ6ZW35 169 aa12.86□□□□□ -0.35
TSPAN4-209ENST00000409543 GTSF1Q8WW33 167 aa12.86□□□□□ -0.35
TSPAN4-209ENST00000409543 FAM229AH3BQW9 127 aa12.85□□□□□ -0.35
TSPAN4-209ENST00000409543 GATCO43716 136 aaKnown RBP12.85□□□□□ -0.35
TSPAN4-209ENST00000409543 NDUFS6O75380 124 aaKnown RBP12.85□□□□□ -0.35
TSPAN4-209ENST00000409543 PGLYRP4Q96LB8 373 aa12.85□□□□□ -0.35
TSPAN4-209ENST00000409543 INAFM2P0DMQ5 153 aa12.84□□□□□ -0.35
TSPAN4-209ENST00000409543 CEBPGP53567 150 aa12.84□□□□□ -0.35
TSPAN4-209ENST00000409543 C14orf177Q52M58 125 aa12.84□□□□□ -0.35
TSPAN4-209ENST00000409543 LINC00269Q8N2A0 174 aa12.84□□□□□ -0.35
TSPAN4-209ENST00000409543 EIF5A2Q9GZV4 153 aaKnown RBP12.84□□□□□ -0.35
TSPAN4-209ENST00000409543 A0A1B0GVG6 124 aa12.83□□□□□ -0.36
TSPAN4-209ENST00000409543 A8MWL6 223 aa12.83□□□□□ -0.36
TSPAN4-209ENST00000409543 TMEM243Q9BU79 118 aa12.83□□□□□ -0.36
TSPAN4-209ENST00000409543 CT83Q5H943 113 aa12.82□□□□□ -0.36
TSPAN4-209ENST00000409543 SMIM15Q7Z3B0 74 aa12.82□□□□□ -0.36
TSPAN4-209ENST00000409543 GATD1Q8NB37 220 aa12.82□□□□□ -0.36
TSPAN4-209ENST00000409543 FAM210AQ96ND0 272 aa12.82□□□□□ -0.36
TSPAN4-209ENST00000409543 SRRM2Q9UQ35 2752 aaKnown RBP12.81□□□□□ -0.36
TSPAN4-209ENST00000409543 A0A1B0GUV1 79 aa12.81□□□□□ -0.36
TSPAN4-209ENST00000409543 FOXA3P55318 350 aaPredicted RBP12.81□□□□□ -0.36
TSPAN4-209ENST00000409543 LINC01620Q4KN68 170 aa12.81□□□□□ -0.36
TSPAN4-209ENST00000409543 SMIM7Q9BQ49 75 aa12.81□□□□□ -0.36
TSPAN4-209ENST00000409543 COTL1Q14019 142 aa12.8□□□□□ -0.36
TSPAN4-209ENST00000409543 KRTAP26-1Q6PEX3 210 aa12.8□□□□□ -0.36
TSPAN4-209ENST00000409543 CLPSL2Q6UWE3 100 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms