RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 PDE6DO43924 150 aa13.84□□□□□ -0.19
VSX1-201ENST00000376707 MUC21A0A0G2JKD1 596 aa13.83□□□□□ -0.2
VSX1-201ENST00000376707 MUC21A0A140T8X8 626 aa13.83□□□□□ -0.2
VSX1-201ENST00000376707 LINC01620Q4KN68 170 aa13.83□□□□□ -0.2
VSX1-201ENST00000376707 Q6ZNX1 250 aa13.83□□□□□ -0.2
VSX1-201ENST00000376707 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.83□□□□□ -0.2
VSX1-201ENST00000376707 NEXN-AS1Q8NBZ9 246 aa13.83□□□□□ -0.2
VSX1-201ENST00000376707 KIF25-AS1Q9Y6Z4 181 aa13.83□□□□□ -0.2
VSX1-201ENST00000376707 TRBV6-8A0A0A6YYG3 113 aa13.82□□□□□ -0.2
VSX1-201ENST00000376707 C19orf71A6NCJ1 209 aa13.82□□□□□ -0.2
VSX1-201ENST00000376707 PLA2G1BP04054 148 aaKnown RBP13.82□□□□□ -0.2
VSX1-201ENST00000376707 Q0VG73 95 aa13.82□□□□□ -0.2
VSX1-201ENST00000376707 MYCBP2O75592 4640 aa13.82□□□□□ -0.2
VSX1-201ENST00000376707 FLG2Q5D862 2391 aaPredicted RBP13.81□□□□□ -0.2
VSX1-201ENST00000376707 RAB19A4D1S5 217 aa13.81□□□□□ -0.2
VSX1-201ENST00000376707 IFNA1P01562 189 aa13.81□□□□□ -0.2
VSX1-201ENST00000376707 IGLC6P0CF74 106 aa13.81□□□□□ -0.2
VSX1-201ENST00000376707 BCL2P10415 239 aa13.81□□□□□ -0.2
VSX1-201ENST00000376707 GNG4P50150 75 aa13.81□□□□□ -0.2
VSX1-201ENST00000376707 LINC00528Q8N1L1 170 aa13.81□□□□□ -0.2
VSX1-201ENST00000376707 AP1S3Q96PC3 154 aa13.81□□□□□ -0.2
VSX1-201ENST00000376707 DNAH8Q96JB1 4490 aa13.8□□□□□ -0.2
VSX1-201ENST00000376707 F5H697 171 aa13.8□□□□□ -0.2
VSX1-201ENST00000376707 RPS20P60866 119 aaKnown RBP13.8□□□□□ -0.2
VSX1-201ENST00000376707 SSTP61278 116 aa13.8□□□□□ -0.2
VSX1-201ENST00000376707 ATRAIDQ6UW56 229 aa13.8□□□□□ -0.2
VSX1-201ENST00000376707 DAZAP1Q96EP5 407 aaKnown RBP13.8□□□□□ -0.2
VSX1-201ENST00000376707 C1orf43Q9BWL3 253 aa13.8□□□□□ -0.2
VSX1-201ENST00000376707 TRBV20OR9-2A0A075B6H5 130 aa13.79□□□□□ -0.2
VSX1-201ENST00000376707 CRPP02741 224 aa13.79□□□□□ -0.2
VSX1-201ENST00000376707 OR2D3Q8NGH3 330 aa13.79□□□□□ -0.2
VSX1-201ENST00000376707 MED9Q9NWA0 146 aa13.79□□□□□ -0.2
VSX1-201ENST00000376707 VAX2Q9UIW0 290 aa13.79□□□□□ -0.2
VSX1-201ENST00000376707 SMIM17P0DL12 118 aa13.78□□□□□ -0.2
VSX1-201ENST00000376707 GZMBP10144 247 aa13.78□□□□□ -0.2
VSX1-201ENST00000376707 TAGLN2P37802 199 aaKnown RBP13.78□□□□□ -0.2
VSX1-201ENST00000376707 C15orf54Q8N8G6 183 aa13.78□□□□□ -0.2
VSX1-201ENST00000376707 FER1L6-AS1Q8NA97 138 aa13.78□□□□□ -0.2
VSX1-201ENST00000376707 CHCHD5Q9BSY4 110 aa13.78□□□□□ -0.2
VSX1-201ENST00000376707 ANGP03950 147 aaKnown RBP13.77□□□□□ -0.21
VSX1-201ENST00000376707 PKIAP61925 76 aa13.77□□□□□ -0.21
VSX1-201ENST00000376707 MPV17L2Q567V2 206 aa13.77□□□□□ -0.21
VSX1-201ENST00000376707 SCXQ7RTU7 201 aa13.77□□□□□ -0.21
VSX1-201ENST00000376707 BIN3Q9NQY0 253 aa13.77□□□□□ -0.21
VSX1-201ENST00000376707 J3QL48 77 aa13.76□□□□□ -0.21
VSX1-201ENST00000376707 P01737 135 aa13.76□□□□□ -0.21
VSX1-201ENST00000376707 CACNG7P62955 275 aa13.76□□□□□ -0.21
VSX1-201ENST00000376707 C14orf177Q52M58 125 aa13.76□□□□□ -0.21
VSX1-201ENST00000376707 ENHOQ6UWT2 76 aa13.76□□□□□ -0.21
VSX1-201ENST00000376707 C9orf62Q8N4C0 152 aa13.76□□□□□ -0.21
VSX1-201ENST00000376707 XKRY2A2RUG3 117 aa13.75□□□□□ -0.21
VSX1-201ENST00000376707 F2Z2F3 143 aa13.75□□□□□ -0.21
VSX1-201ENST00000376707 TMEM97Q5BJF2 176 aa13.75□□□□□ -0.21
VSX1-201ENST00000376707 AKAP14Q86UN6 197 aa13.75□□□□□ -0.21
VSX1-201ENST00000376707 TPPP3Q9BW30 176 aa13.75□□□□□ -0.21
VSX1-201ENST00000376707 M0QY20 66 aa13.74□□□□□ -0.21
VSX1-201ENST00000376707 CHAC1Q9BUX1 264 aa13.74□□□□□ -0.21
VSX1-201ENST00000376707 NTM-AS1Q6ZSK4 140 aa13.73□□□□□ -0.21
VSX1-201ENST00000376707 DEFB104AQ8WTQ1 72 aa13.72□□□□□ -0.21
VSX1-201ENST00000376707 H7C1H1 209 aa13.71□□□□□ -0.21
VSX1-201ENST00000376707 HLA-DQA1P01909 254 aa13.71□□□□□ -0.21
VSX1-201ENST00000376707 MGPP08493 103 aa13.71□□□□□ -0.21
VSX1-201ENST00000376707 MIAQ16674 131 aa13.71□□□□□ -0.21
VSX1-201ENST00000376707 LYZL1Q6UWQ5 148 aa13.71□□□□□ -0.21
VSX1-201ENST00000376707 NUDT10Q8NFP7 164 aa13.71□□□□□ -0.21
VSX1-201ENST00000376707 NUDT11Q96G61 164 aa13.71□□□□□ -0.21
VSX1-201ENST00000376707 TRBV25-1A0A075B6N4 114 aa13.7□□□□□ -0.22
VSX1-201ENST00000376707 CTRLP40313 264 aa13.7□□□□□ -0.22
VSX1-201ENST00000376707 SUMO4Q6EEV6 95 aa13.7□□□□□ -0.22
VSX1-201ENST00000376707 WDR73Q6P4I2 378 aa13.7□□□□□ -0.22
VSX1-201ENST00000376707 CIRBP-AS1Q8TBR5 109 aa13.7□□□□□ -0.22
VSX1-201ENST00000376707 USP17L23D6RBM5 183 aa13.69□□□□□ -0.22
VSX1-201ENST00000376707 TRGC1P0CF51 173 aa13.69□□□□□ -0.22
VSX1-201ENST00000376707 RBX1P62877 108 aa13.69□□□□□ -0.22
VSX1-201ENST00000376707 GAGE6Q13070 117 aa13.69□□□□□ -0.22
VSX1-201ENST00000376707 LYPD6BQ8NI32 183 aa13.69□□□□□ -0.22
VSX1-201ENST00000376707 CNFNQ9BYD5 112 aa13.69□□□□□ -0.22
VSX1-201ENST00000376707 NTF3P20783 257 aa13.68□□□□□ -0.22
VSX1-201ENST00000376707 BLOC1S1P78537 153 aa13.68□□□□□ -0.22
VSX1-201ENST00000376707 IQCJQ1A5X6 159 aa13.68□□□□□ -0.22
VSX1-201ENST00000376707 CLPSL2Q6UWE3 100 aa13.68□□□□□ -0.22
VSX1-201ENST00000376707 OCC1Q8TAD7 63 aa13.68□□□□□ -0.22
VSX1-201ENST00000376707 TMEM250H0YL14 139 aa13.67□□□□□ -0.22
VSX1-201ENST00000376707 K7EN84 100 aa13.67□□□□□ -0.22
VSX1-201ENST00000376707 ALKAL2Q6UX46 152 aa13.67□□□□□ -0.22
VSX1-201ENST00000376707 LINC00269Q8N2A0 174 aa13.67□□□□□ -0.22
VSX1-201ENST00000376707 DPH3P1Q9H4G8 78 aa13.67□□□□□ -0.22
VSX1-201ENST00000376707 RPP21Q9H633 154 aaKnown RBP13.67□□□□□ -0.22
VSX1-201ENST00000376707 PRR34Q9NV39 138 aa13.67□□□□□ -0.22
VSX1-201ENST00000376707 hCG_2014768A0A024R1R8 64 aa13.66□□□□□ -0.22
VSX1-201ENST00000376707 IGHV1-24A0A0C4DH33 117 aa13.66□□□□□ -0.22
VSX1-201ENST00000376707 RASL11AQ6T310 242 aa13.66□□□□□ -0.22
VSX1-201ENST00000376707 KRTAP3-3Q9BYR6 98 aa13.66□□□□□ -0.22
VSX1-201ENST00000376707 KRTAP3-2Q9BYR7 98 aa13.66□□□□□ -0.22
VSX1-201ENST00000376707 KRTAP29-1A8MX34 341 aaPredicted RBP13.65□□□□□ -0.22
VSX1-201ENST00000376707 RNASE7Q9H1E1 156 aaKnown RBP13.65□□□□□ -0.22
VSX1-201ENST00000376707 NKX2-5P52952 324 aaPredicted RBP13.64□□□□□ -0.23
VSX1-201ENST00000376707 NIT2Q9NQR4 276 aa13.64□□□□□ -0.23
VSX1-201ENST00000376707 PRSS1P07477 247 aa13.63□□□□□ -0.23
VSX1-201ENST00000376707 DGAT2L7PQ6IED9 249 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms