RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 TMEM218A2RU14 115 aa11.04□□□□□ -0.64
PDLIM7-201ENST00000355572 TAGLN2P37802 199 aaKnown RBP11.04□□□□□ -0.64
PDLIM7-201ENST00000355572 RAB4BP61018 213 aa11.04□□□□□ -0.64
PDLIM7-201ENST00000355572 KLK12Q9UKR0 248 aa11.04□□□□□ -0.64
PDLIM7-201ENST00000355572 CARHSP1Q9Y2V2 147 aaKnown RBP11.04□□□□□ -0.64
PDLIM7-201ENST00000355572 A0A087WWC5 75 aa11.03□□□□□ -0.64
PDLIM7-201ENST00000355572 RPL36AP83881 106 aaKnown RBP11.03□□□□□ -0.64
PDLIM7-201ENST00000355572 C10orf91Q5T1B1 145 aa11.03□□□□□ -0.64
PDLIM7-201ENST00000355572 NTM-AS1Q6ZSK4 140 aa11.03□□□□□ -0.64
PDLIM7-201ENST00000355572 BAALCQ8WXS3 180 aa11.03□□□□□ -0.64
PDLIM7-201ENST00000355572 RPL36ALQ969Q0 106 aaKnown RBP11.03□□□□□ -0.64
PDLIM7-201ENST00000355572 SEC11CQ9BY50 192 aa11.03□□□□□ -0.64
PDLIM7-201ENST00000355572 VPS13BQ7Z7G8 4022 aa11.03□□□□□ -0.64
PDLIM7-201ENST00000355572 IFNA1P01562 189 aa11.02□□□□□ -0.65
PDLIM7-201ENST00000355572 BCL2P10415 239 aa11.02□□□□□ -0.65
PDLIM7-201ENST00000355572 MEF2BQ02080 365 aaPredicted RBP11.02□□□□□ -0.65
PDLIM7-201ENST00000355572 LINC01620Q4KN68 170 aa11.02□□□□□ -0.65
PDLIM7-201ENST00000355572 SPANXN1Q5VSR9 72 aa11.02□□□□□ -0.65
PDLIM7-201ENST00000355572 EPM2AB3EWF7 344 aa11.01□□□□□ -0.65
PDLIM7-201ENST00000355572 OR2D3Q8NGH3 330 aa11.01□□□□□ -0.65
PDLIM7-201ENST00000355572 NTN5Q8WTR8 489 aaPredicted RBP11.01□□□□□ -0.65
PDLIM7-201ENST00000355572 IGLV2-33A0A075B6J2 118 aaPredicted RBP11□□□□□ -0.65
PDLIM7-201ENST00000355572 TRBV6-8A0A0A6YYG3 113 aa11□□□□□ -0.65
PDLIM7-201ENST00000355572 MPV17L2Q567V2 206 aa11□□□□□ -0.65
PDLIM7-201ENST00000355572 Q5VSD8 79 aa11□□□□□ -0.65
PDLIM7-201ENST00000355572 ENHOQ6UWT2 76 aa11□□□□□ -0.65
PDLIM7-201ENST00000355572 SVBPQ8N300 66 aa11□□□□□ -0.65
PDLIM7-201ENST00000355572 UBE2WQ96B02 151 aa11□□□□□ -0.65
PDLIM7-201ENST00000355572 TRAV8-3A0A0A6YYJ7 113 aa10.99□□□□□ -0.65
PDLIM7-201ENST00000355572 K7EN84 100 aa10.99□□□□□ -0.65
PDLIM7-201ENST00000355572 GNG4P50150 75 aa10.99□□□□□ -0.65
PDLIM7-201ENST00000355572 FER1L6-AS1Q8NA97 138 aa10.99□□□□□ -0.65
PDLIM7-201ENST00000355572 TPPP3Q9BW30 176 aa10.99□□□□□ -0.65
PDLIM7-201ENST00000355572 TM2D2Q9BX73 214 aa10.99□□□□□ -0.65
PDLIM7-201ENST00000355572 IGKV2D-24A0A075B6R9 120 aa10.98□□□□□ -0.65
PDLIM7-201ENST00000355572 F5H697 171 aa10.98□□□□□ -0.65
PDLIM7-201ENST00000355572 F8W036 122 aa10.98□□□□□ -0.65
PDLIM7-201ENST00000355572 Q8N976 141 aa10.98□□□□□ -0.65
PDLIM7-201ENST00000355572 EIF5A2Q9GZV4 153 aaKnown RBP10.98□□□□□ -0.65
PDLIM7-201ENST00000355572 M0QY20 66 aa10.97□□□□□ -0.65
PDLIM7-201ENST00000355572 MGPP08493 103 aa10.97□□□□□ -0.65
PDLIM7-201ENST00000355572 ADCYAP1P18509 176 aa10.97□□□□□ -0.65
PDLIM7-201ENST00000355572 SRSF3P84103 164 aaKnown RBP10.97□□□□□ -0.65
PDLIM7-201ENST00000355572 SUMO4Q6EEV6 95 aa10.97□□□□□ -0.65
PDLIM7-201ENST00000355572 ATRAIDQ6UW56 229 aa10.97□□□□□ -0.65
PDLIM7-201ENST00000355572 NUDT10Q8NFP7 164 aa10.97□□□□□ -0.65
PDLIM7-201ENST00000355572 DEFB104AQ8WTQ1 72 aa10.97□□□□□ -0.65
PDLIM7-201ENST00000355572 NUDT11Q96G61 164 aa10.97□□□□□ -0.65
PDLIM7-201ENST00000355572 AP1S3Q96PC3 154 aa10.97□□□□□ -0.65
PDLIM7-201ENST00000355572 VAX2Q9UIW0 290 aa10.97□□□□□ -0.65
PDLIM7-201ENST00000355572 PDE6DO43924 150 aa10.96□□□□□ -0.65
PDLIM7-201ENST00000355572 SNAPINO95295 136 aa10.96□□□□□ -0.65
PDLIM7-201ENST00000355572 LYZL1Q6UWQ5 148 aa10.96□□□□□ -0.65
PDLIM7-201ENST00000355572 TMEM70Q9BUB7 260 aa10.96□□□□□ -0.65
PDLIM7-201ENST00000355572 URGCP-MRPS24S4R325 110 aa10.96□□□□□ -0.65
PDLIM7-201ENST00000355572 A0A087WX48 190 aa10.95□□□□□ -0.66
PDLIM7-201ENST00000355572 APOC3P02656 99 aa10.95□□□□□ -0.66
PDLIM7-201ENST00000355572 Q6ZSA8 131 aa10.95□□□□□ -0.66
PDLIM7-201ENST00000355572 C15orf54Q8N8G6 183 aa10.95□□□□□ -0.66
PDLIM7-201ENST00000355572 OCC1Q8TAD7 63 aa10.95□□□□□ -0.66
PDLIM7-201ENST00000355572 RNASE7Q9H1E1 156 aaKnown RBP10.95□□□□□ -0.66
PDLIM7-201ENST00000355572 TMEM262E9PQX1 116 aa10.94□□□□□ -0.66
PDLIM7-201ENST00000355572 P01737 135 aa10.94□□□□□ -0.66
PDLIM7-201ENST00000355572 GAGE6Q13070 117 aa10.94□□□□□ -0.66
PDLIM7-201ENST00000355572 DAZAP1Q96EP5 407 aaKnown RBP10.94□□□□□ -0.66
PDLIM7-201ENST00000355572 SMIM12Q96EX1 92 aa10.94□□□□□ -0.66
PDLIM7-201ENST00000355572 CHCHD7Q9BUK0 85 aa10.94□□□□□ -0.66
PDLIM7-201ENST00000355572 INAFM2P0DMQ5 153 aa10.93□□□□□ -0.66
PDLIM7-201ENST00000355572 CTRLP40313 264 aa10.93□□□□□ -0.66
PDLIM7-201ENST00000355572 RPS20P60866 119 aaKnown RBP10.93□□□□□ -0.66
PDLIM7-201ENST00000355572 KRTAP26-1Q6PEX3 210 aa10.93□□□□□ -0.66
PDLIM7-201ENST00000355572 CLPSL2Q6UWE3 100 aa10.93□□□□□ -0.66
PDLIM7-201ENST00000355572 CHCHD5Q9BSY4 110 aa10.93□□□□□ -0.66
PDLIM7-201ENST00000355572 C9JQL5 133 aa10.92□□□□□ -0.66
PDLIM7-201ENST00000355572 TMEM250H0YL14 139 aa10.92□□□□□ -0.66
PDLIM7-201ENST00000355572 SRP19P09132 144 aaKnown RBP10.92□□□□□ -0.66
PDLIM7-201ENST00000355572 SMIM17P0DL12 118 aa10.92□□□□□ -0.66
PDLIM7-201ENST00000355572 NTF3P20783 257 aa10.92□□□□□ -0.66
PDLIM7-201ENST00000355572 GTSF1Q8WW33 167 aa10.92□□□□□ -0.66
PDLIM7-201ENST00000355572 FRZBQ92765 325 aa10.92□□□□□ -0.66
PDLIM7-201ENST00000355572 GFRA4Q9GZZ7 299 aa10.92□□□□□ -0.66
PDLIM7-201ENST00000355572 ANGP03950 147 aaKnown RBP10.91□□□□□ -0.66
PDLIM7-201ENST00000355572 FOXA3P55318 350 aaPredicted RBP10.91□□□□□ -0.66
PDLIM7-201ENST00000355572 RBX1P62877 108 aa10.91□□□□□ -0.66
PDLIM7-201ENST00000355572 CACNG7P62955 275 aa10.91□□□□□ -0.66
PDLIM7-201ENST00000355572 RHEBQ15382 184 aa10.9□□□□□ -0.66
PDLIM7-201ENST00000355572 FLG2Q5D862 2391 aaPredicted RBP10.9□□□□□ -0.66
PDLIM7-201ENST00000355572 TRAV26-2A0A0B4J265 109 aa10.89□□□□□ -0.67
PDLIM7-201ENST00000355572 IQCJQ1A5X6 159 aa10.89□□□□□ -0.67
PDLIM7-201ENST00000355572 FAM74A3Q4VXF1 159 aa10.89□□□□□ -0.67
PDLIM7-201ENST00000355572 CLRN3Q8NCR9 226 aa10.89□□□□□ -0.67
PDLIM7-201ENST00000355572 RMI2Q96E14 147 aa10.89□□□□□ -0.67
PDLIM7-201ENST00000355572 CNFNQ9BYD5 112 aa10.89□□□□□ -0.67
PDLIM7-201ENST00000355572 RPP21Q9H633 154 aaKnown RBP10.89□□□□□ -0.67
PDLIM7-201ENST00000355572 PRR34Q9NV39 138 aa10.89□□□□□ -0.67
PDLIM7-201ENST00000355572 COX11Q9Y6N1 276 aa10.89□□□□□ -0.67
PDLIM7-201ENST00000355572 IGLV4-60A0A075B6I1 120 aa10.88□□□□□ -0.67
PDLIM7-201ENST00000355572 F2Z2F3 143 aa10.88□□□□□ -0.67
PDLIM7-201ENST00000355572 PNRC1Q12796 327 aaPredicted RBP10.88□□□□□ -0.67
PDLIM7-201ENST00000355572 ELOBQ15370 118 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms