RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 KRBOX1C9JBD0 128 aa10.45□□□□□ -0.74
PDGFA-201ENST00000354513 F8W036 122 aa10.45□□□□□ -0.74
PDGFA-201ENST00000354513 P01737 135 aa10.45□□□□□ -0.74
PDGFA-201ENST00000354513 LINC01559Q495D7 138 aa10.45□□□□□ -0.74
PDGFA-201ENST00000354513 PIK3CD-AS1Q5SR53 167 aa10.45□□□□□ -0.74
PDGFA-201ENST00000354513 RNASE7Q9H1E1 156 aaKnown RBP10.45□□□□□ -0.74
PDGFA-201ENST00000354513 A8MWV9 139 aa10.44□□□□□ -0.74
PDGFA-201ENST00000354513 ADCYAP1P18509 176 aa10.44□□□□□ -0.74
PDGFA-201ENST00000354513 RPL19P84098 196 aaKnown RBP10.44□□□□□ -0.74
PDGFA-201ENST00000354513 NDUFA5Q16718 116 aa10.44□□□□□ -0.74
PDGFA-201ENST00000354513 SLC7A5P1Q8MH63 180 aa10.44□□□□□ -0.74
PDGFA-201ENST00000354513 NUDT10Q8NFP7 164 aa10.44□□□□□ -0.74
PDGFA-201ENST00000354513 NUDT11Q96G61 164 aa10.44□□□□□ -0.74
PDGFA-201ENST00000354513 GRIFINA4D1Z8 144 aa10.43□□□□□ -0.74
PDGFA-201ENST00000354513 H3BVH4 76 aa10.43□□□□□ -0.74
PDGFA-201ENST00000354513 LINC01620Q4KN68 170 aa10.43□□□□□ -0.74
PDGFA-201ENST00000354513 DNLZQ5SXM8 178 aa10.43□□□□□ -0.74
PDGFA-201ENST00000354513 DMRTA1Q5VZB9 504 aa10.43□□□□□ -0.74
PDGFA-201ENST00000354513 LINC00528Q8N1L1 170 aa10.43□□□□□ -0.74
PDGFA-201ENST00000354513 OR2D3Q8NGH3 330 aa10.43□□□□□ -0.74
PDGFA-201ENST00000354513 ISOC2Q96AB3 205 aa10.43□□□□□ -0.74
PDGFA-201ENST00000354513 TM2D2Q9BX73 214 aa10.43□□□□□ -0.74
PDGFA-201ENST00000354513 SEC11CQ9BY50 192 aa10.43□□□□□ -0.74
PDGFA-201ENST00000354513 IL36BQ9NZH7 164 aa10.43□□□□□ -0.74
PDGFA-201ENST00000354513 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.42□□□□□ -0.74
PDGFA-201ENST00000354513 GATCO43716 136 aaKnown RBP10.42□□□□□ -0.74
PDGFA-201ENST00000354513 ASIPP42127 132 aa10.42□□□□□ -0.74
PDGFA-201ENST00000354513 KRTAP10-4P60372 401 aaPredicted RBP10.42□□□□□ -0.74
PDGFA-201ENST00000354513 FAM231DQ6ZW35 169 aa10.42□□□□□ -0.74
PDGFA-201ENST00000354513 BAALCQ8WXS3 180 aa10.42□□□□□ -0.74
PDGFA-201ENST00000354513 TRAV8-3A0A0A6YYJ7 113 aa10.41□□□□□ -0.74
PDGFA-201ENST00000354513 S100A4P26447 101 aaKnown RBP10.41□□□□□ -0.74
PDGFA-201ENST00000354513 RPS20P60866 119 aaKnown RBP10.41□□□□□ -0.74
PDGFA-201ENST00000354513 RPP21Q9H633 154 aaKnown RBP10.41□□□□□ -0.74
PDGFA-201ENST00000354513 OSTCQ9NRP0 149 aa10.41□□□□□ -0.74
PDGFA-201ENST00000354513 XKRY2A2RUG3 117 aa10.4□□□□□ -0.74
PDGFA-201ENST00000354513 PNRC1Q12796 327 aaPredicted RBP10.4□□□□□ -0.74
PDGFA-201ENST00000354513 SCXQ7RTU7 201 aa10.4□□□□□ -0.74
PDGFA-201ENST00000354513 NIT1Q86X76 327 aa10.4□□□□□ -0.74
PDGFA-201ENST00000354513 C15orf54Q8N8G6 183 aa10.4□□□□□ -0.74
PDGFA-201ENST00000354513 SFRP2Q96HF1 295 aa10.4□□□□□ -0.74
PDGFA-201ENST00000354513 CXCL1P09341 107 aa10.39□□□□□ -0.75
PDGFA-201ENST00000354513 ARMS2P0C7Q2 107 aa10.39□□□□□ -0.75
PDGFA-201ENST00000354513 GZMBP10144 247 aa10.39□□□□□ -0.75
PDGFA-201ENST00000354513 C10orf91Q5T1B1 145 aa10.39□□□□□ -0.75
PDGFA-201ENST00000354513 OR10G8Q8NGN5 311 aa10.39□□□□□ -0.75
PDGFA-201ENST00000354513 KRTAP29-1A8MX34 341 aaPredicted RBP10.38□□□□□ -0.75
PDGFA-201ENST00000354513 CARHSP1Q9Y2V2 147 aaKnown RBP10.38□□□□□ -0.75
PDGFA-201ENST00000354513 A0A087WWC5 75 aa10.37□□□□□ -0.75
PDGFA-201ENST00000354513 A0A087WWL8 130 aa10.37□□□□□ -0.75
PDGFA-201ENST00000354513 RHODO00212 210 aa10.37□□□□□ -0.75
PDGFA-201ENST00000354513 PLA2G1BP04054 148 aaKnown RBP10.37□□□□□ -0.75
PDGFA-201ENST00000354513 V9GYV3 84 aa10.37□□□□□ -0.75
PDGFA-201ENST00000354513 HMCN2Q8NDA2 5059 aa10.36□□□□□ -0.75
PDGFA-201ENST00000354513 A8MWL6 223 aa10.36□□□□□ -0.75
PDGFA-201ENST00000354513 J3QL48 77 aa10.36□□□□□ -0.75
PDGFA-201ENST00000354513 CT83Q5H943 113 aa10.36□□□□□ -0.75
PDGFA-201ENST00000354513 FAM74A4Q5TZK3 123 aa10.36□□□□□ -0.75
PDGFA-201ENST00000354513 ATRAIDQ6UW56 229 aa10.36□□□□□ -0.75
PDGFA-201ENST00000354513 FER1L6-AS1Q8NA97 138 aa10.36□□□□□ -0.75
PDGFA-201ENST00000354513 TPPP3Q9BW30 176 aa10.36□□□□□ -0.75
PDGFA-201ENST00000354513 KLK12Q9UKR0 248 aa10.36□□□□□ -0.75
PDGFA-201ENST00000354513 IGKV2D-24A0A075B6R9 120 aa10.35□□□□□ -0.75
PDGFA-201ENST00000354513 MT-ND4LP03901 98 aa10.35□□□□□ -0.75
PDGFA-201ENST00000354513 UBE2D3P61077 147 aa10.35□□□□□ -0.75
PDGFA-201ENST00000354513 UBE2D2P62837 147 aa10.35□□□□□ -0.75
PDGFA-201ENST00000354513 PHLDA3Q9Y5J5 127 aa10.35□□□□□ -0.75
PDGFA-201ENST00000354513 PPP1R2P9O14990 202 aa10.34□□□□□ -0.75
PDGFA-201ENST00000354513 APOC3P02656 99 aa10.34□□□□□ -0.75
PDGFA-201ENST00000354513 IGLC6P0CF74 106 aa10.34□□□□□ -0.75
PDGFA-201ENST00000354513 SYT8Q8NBV8 401 aa10.34□□□□□ -0.75
PDGFA-201ENST00000354513 TSKUQ8WUA8 353 aa10.34□□□□□ -0.75
PDGFA-201ENST00000354513 MUC21A0A0G2JKD1 596 aa10.33□□□□□ -0.76
PDGFA-201ENST00000354513 MUC21A0A140T8X8 626 aa10.33□□□□□ -0.76
PDGFA-201ENST00000354513 M0R381 172 aa10.33□□□□□ -0.76
PDGFA-201ENST00000354513 SNAI2O43623 268 aa10.33□□□□□ -0.76
PDGFA-201ENST00000354513 OR5AL1P0C617 328 aa10.33□□□□□ -0.76
PDGFA-201ENST00000354513 ANAPC16Q96DE5 110 aa10.33□□□□□ -0.76
PDGFA-201ENST00000354513 SSBP4Q9BWG4 385 aaPredicted RBP10.33□□□□□ -0.76
PDGFA-201ENST00000354513 COX11Q9Y6N1 276 aa10.33□□□□□ -0.76
PDGFA-201ENST00000354513 SSTP61278 116 aa10.33□□□□□ -0.76
PDGFA-201ENST00000354513 LYZL1Q6UWQ5 148 aa10.33□□□□□ -0.76
PDGFA-201ENST00000354513 ZFP82Q8N141 532 aa10.33□□□□□ -0.76
PDGFA-201ENST00000354513 Q8N976 141 aa10.33□□□□□ -0.76
PDGFA-201ENST00000354513 CLRN3Q8NCR9 226 aa10.33□□□□□ -0.76
PDGFA-201ENST00000354513 OR10AG1Q8NH19 301 aa10.33□□□□□ -0.76
PDGFA-201ENST00000354513 CIRBP-AS1Q8TBR5 109 aa10.33□□□□□ -0.76
PDGFA-201ENST00000354513 DEFB104AQ8WTQ1 72 aa10.33□□□□□ -0.76
PDGFA-201ENST00000354513 GTSF1Q8WW33 167 aa10.33□□□□□ -0.76
PDGFA-201ENST00000354513 UBE2WQ96B02 151 aa10.33□□□□□ -0.76
PDGFA-201ENST00000354513 RMI2Q96E14 147 aa10.33□□□□□ -0.76
PDGFA-201ENST00000354513 CHAC1Q9BUX1 264 aa10.33□□□□□ -0.76
PDGFA-201ENST00000354513 GFRA4Q9GZZ7 299 aa10.33□□□□□ -0.76
PDGFA-201ENST00000354513 TRBV10-1A0A0K0K1A3 114 aa10.32□□□□□ -0.76
PDGFA-201ENST00000354513 F2Z2F3 143 aa10.32□□□□□ -0.76
PDGFA-201ENST00000354513 SPANXN1Q5VSR9 72 aa10.32□□□□□ -0.76
PDGFA-201ENST00000354513 ENHOQ6UWT2 76 aa10.32□□□□□ -0.76
PDGFA-201ENST00000354513 SVBPQ8N300 66 aa10.32□□□□□ -0.76
PDGFA-201ENST00000354513 PGLYRP4Q96LB8 373 aa10.32□□□□□ -0.76
PDGFA-201ENST00000354513 CHCHD7Q9BUK0 85 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms