RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 FAM30AQ9NZY2 134 aa11.7□□□□□ -0.54
CMTM1-204ENST00000336328 H7C1H1 209 aa11.69□□□□□ -0.54
CMTM1-204ENST00000336328 PDE6DO43924 150 aa11.69□□□□□ -0.54
CMTM1-204ENST00000336328 SSTP61278 116 aa11.69□□□□□ -0.54
CMTM1-204ENST00000336328 CCL20P78556 96 aa11.69□□□□□ -0.54
CMTM1-204ENST00000336328 DNAJC30Q96LL9 226 aa11.69□□□□□ -0.54
CMTM1-204ENST00000336328 CHCHD5Q9BSY4 110 aa11.69□□□□□ -0.54
CMTM1-204ENST00000336328 DMBT1Q9UGM3 2413 aaPredicted RBP11.68□□□□□ -0.54
CMTM1-204ENST00000336328 MUC21A0A0G2JKD1 596 aa11.68□□□□□ -0.54
CMTM1-204ENST00000336328 MUC21A0A140T8X8 626 aa11.68□□□□□ -0.54
CMTM1-204ENST00000336328 F2Z2F3 143 aa11.68□□□□□ -0.54
CMTM1-204ENST00000336328 PLA2G1BP04054 148 aaKnown RBP11.68□□□□□ -0.54
CMTM1-204ENST00000336328 GNG4P50150 75 aa11.68□□□□□ -0.54
CMTM1-204ENST00000336328 SULT1A2P50226 295 aa11.68□□□□□ -0.54
CMTM1-204ENST00000336328 CACNG7P62955 275 aa11.68□□□□□ -0.54
CMTM1-204ENST00000336328 VAX2Q9UIW0 290 aa11.68□□□□□ -0.54
CMTM1-204ENST00000336328 ANGP03950 147 aaKnown RBP11.67□□□□□ -0.54
CMTM1-204ENST00000336328 TAGLN2P37802 199 aaKnown RBP11.67□□□□□ -0.54
CMTM1-204ENST00000336328 HAMPP81172 84 aa11.67□□□□□ -0.54
CMTM1-204ENST00000336328 MEF2BQ02080 365 aaPredicted RBP11.67□□□□□ -0.54
CMTM1-204ENST00000336328 CENPWQ5EE01 88 aa11.67□□□□□ -0.54
CMTM1-204ENST00000336328 Q6ZSA8 131 aa11.67□□□□□ -0.54
CMTM1-204ENST00000336328 FER1L6-AS1Q8NA97 138 aa11.67□□□□□ -0.54
CMTM1-204ENST00000336328 OR2D3Q8NGH3 330 aa11.67□□□□□ -0.54
CMTM1-204ENST00000336328 DERL1Q9BUN8 251 aa11.67□□□□□ -0.54
CMTM1-204ENST00000336328 MIAQ16674 131 aa11.66□□□□□ -0.54
CMTM1-204ENST00000336328 C15orf54Q8N8G6 183 aa11.66□□□□□ -0.54
CMTM1-204ENST00000336328 TPPP3Q9BW30 176 aa11.66□□□□□ -0.54
CMTM1-204ENST00000336328 MED9Q9NWA0 146 aa11.66□□□□□ -0.54
CMTM1-204ENST00000336328 KIF25-AS1Q9Y6Z4 181 aa11.66□□□□□ -0.54
CMTM1-204ENST00000336328 TRBV25-1A0A075B6N4 114 aa11.65□□□□□ -0.54
CMTM1-204ENST00000336328 P01737 135 aa11.65□□□□□ -0.54
CMTM1-204ENST00000336328 SLC51BQ86UW2 128 aa11.65□□□□□ -0.54
CMTM1-204ENST00000336328 SRRM2Q9UQ35 2752 aaKnown RBP11.65□□□□□ -0.54
CMTM1-204ENST00000336328 FLG2Q5D862 2391 aaPredicted RBP11.64□□□□□ -0.55
CMTM1-204ENST00000336328 C19orf71A6NCJ1 209 aa11.64□□□□□ -0.55
CMTM1-204ENST00000336328 TRGC1P0CF51 173 aa11.64□□□□□ -0.55
CMTM1-204ENST00000336328 IGLC6P0CF74 106 aa11.64□□□□□ -0.55
CMTM1-204ENST00000336328 MPV17L2Q567V2 206 aa11.64□□□□□ -0.55
CMTM1-204ENST00000336328 ENHOQ6UWT2 76 aa11.64□□□□□ -0.55
CMTM1-204ENST00000336328 TCTE3Q8IZS6 198 aa11.64□□□□□ -0.55
CMTM1-204ENST00000336328 RAB19A4D1S5 217 aa11.63□□□□□ -0.55
CMTM1-204ENST00000336328 IGLV2-8P01709 118 aa11.63□□□□□ -0.55
CMTM1-204ENST00000336328 WDR73Q6P4I2 378 aa11.63□□□□□ -0.55
CMTM1-204ENST00000336328 M0QY20 66 aa11.62□□□□□ -0.55
CMTM1-204ENST00000336328 MGPP08493 103 aa11.62□□□□□ -0.55
CMTM1-204ENST00000336328 GZMBP10144 247 aa11.62□□□□□ -0.55
CMTM1-204ENST00000336328 FAT1Q14517 4588 aa11.62□□□□□ -0.55
CMTM1-204ENST00000336328 IGHV1-24A0A0C4DH33 117 aa11.61□□□□□ -0.55
CMTM1-204ENST00000336328 BCL2P10415 239 aa11.61□□□□□ -0.55
CMTM1-204ENST00000336328 IQCJQ1A5X6 159 aa11.61□□□□□ -0.55
CMTM1-204ENST00000336328 NTM-AS1Q6ZSK4 140 aa11.61□□□□□ -0.55
CMTM1-204ENST00000336328 RBX1P62877 108 aa11.6□□□□□ -0.55
CMTM1-204ENST00000336328 DGAT2L7PQ6IED9 249 aa11.6□□□□□ -0.55
CMTM1-204ENST00000336328 RASL11AQ6T310 242 aa11.6□□□□□ -0.55
CMTM1-204ENST00000336328 LINC00528Q8N1L1 170 aa11.6□□□□□ -0.55
CMTM1-204ENST00000336328 C9orf62Q8N4C0 152 aa11.6□□□□□ -0.55
CMTM1-204ENST00000336328 CHAC1Q9BUX1 264 aa11.6□□□□□ -0.55
CMTM1-204ENST00000336328 DPH3P1Q9H4G8 78 aa11.6□□□□□ -0.55
CMTM1-204ENST00000336328 PRR34Q9NV39 138 aa11.6□□□□□ -0.55
CMTM1-204ENST00000336328 NTF3P20783 257 aa11.59□□□□□ -0.55
CMTM1-204ENST00000336328 GAGE6Q13070 117 aa11.59□□□□□ -0.55
CMTM1-204ENST00000336328 LINC01620Q4KN68 170 aa11.59□□□□□ -0.55
CMTM1-204ENST00000336328 SUMO4Q6EEV6 95 aa11.59□□□□□ -0.55
CMTM1-204ENST00000336328 LYZL1Q6UWQ5 148 aa11.59□□□□□ -0.55
CMTM1-204ENST00000336328 NIT2Q9NQR4 276 aa11.59□□□□□ -0.55
CMTM1-204ENST00000336328 LINC00269Q8N2A0 174 aa11.58□□□□□ -0.56
CMTM1-204ENST00000336328 NUDT10Q8NFP7 164 aa11.58□□□□□ -0.56
CMTM1-204ENST00000336328 DEFB104AQ8WTQ1 72 aa11.58□□□□□ -0.56
CMTM1-204ENST00000336328 NUDT11Q96G61 164 aa11.58□□□□□ -0.56
CMTM1-204ENST00000336328 TRAV8-4A0A0B4J246 113 aa11.57□□□□□ -0.56
CMTM1-204ENST00000336328 A0A1B0GUV1 79 aa11.57□□□□□ -0.56
CMTM1-204ENST00000336328 HLA-DQA1P01909 254 aa11.57□□□□□ -0.56
CMTM1-204ENST00000336328 SCXQ7RTU7 201 aa11.57□□□□□ -0.56
CMTM1-204ENST00000336328 CLRN3Q8NCR9 226 aa11.57□□□□□ -0.56
CMTM1-204ENST00000336328 USP17L23D6RBM5 183 aa11.56□□□□□ -0.56
CMTM1-204ENST00000336328 J3QL48 77 aa11.56□□□□□ -0.56
CMTM1-204ENST00000336328 NKX2-5P52952 324 aaPredicted RBP11.56□□□□□ -0.56
CMTM1-204ENST00000336328 PGLYRP4Q96LB8 373 aa11.56□□□□□ -0.56
CMTM1-204ENST00000336328 TMEM243Q9BU79 118 aa11.56□□□□□ -0.56
CMTM1-204ENST00000336328 TRBV20OR9-2A0A075B6H5 130 aa11.55□□□□□ -0.56
CMTM1-204ENST00000336328 BLOC1S1P78537 153 aa11.55□□□□□ -0.56
CMTM1-204ENST00000336328 REG3AQ06141 175 aa11.55□□□□□ -0.56
CMTM1-204ENST00000336328 TWIST1Q15672 202 aa11.55□□□□□ -0.56
CMTM1-204ENST00000336328 SMIM15Q7Z3B0 74 aa11.55□□□□□ -0.56
CMTM1-204ENST00000336328 UBE2L6O14933 153 aa11.54□□□□□ -0.56
CMTM1-204ENST00000336328 COTL1Q14019 142 aa11.54□□□□□ -0.56
CMTM1-204ENST00000336328 CIRBP-AS1Q8TBR5 109 aa11.54□□□□□ -0.56
CMTM1-204ENST00000336328 RPP21Q9H633 154 aaKnown RBP11.54□□□□□ -0.56
CMTM1-204ENST00000336328 VPS13BQ7Z7G8 4022 aa11.54□□□□□ -0.56
CMTM1-204ENST00000336328 CTRLP40313 264 aa11.53□□□□□ -0.56
CMTM1-204ENST00000336328 TEX261Q6UWH6 196 aa11.53□□□□□ -0.56
CMTM1-204ENST00000336328 OCC1Q8TAD7 63 aa11.53□□□□□ -0.56
CMTM1-204ENST00000336328 CNFNQ9BYD5 112 aa11.53□□□□□ -0.56
CMTM1-204ENST00000336328 TMEM250H0YL14 139 aa11.52□□□□□ -0.57
CMTM1-204ENST00000336328 PRSS1P07477 247 aa11.52□□□□□ -0.57
CMTM1-204ENST00000336328 CLPSL2Q6UWE3 100 aa11.52□□□□□ -0.57
CMTM1-204ENST00000336328 C9orf163Q8N9P6 203 aa11.52□□□□□ -0.57
CMTM1-204ENST00000336328 Q6ZNX1 250 aa11.51□□□□□ -0.57
CMTM1-204ENST00000336328 AMTP48728 403 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms