RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 IGHV4OR15-8A0A075B7B6 117 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 A0A087WW49 117 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 A0A087WX48 190 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 GAGE12JA6NER3 117 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 PRSS29PA6NIE9 313 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 GAGE7O76087 117 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 MT-ATP8P03928 68 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 GAGE12FP0CL80 117 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 GAGE12GP0CL81 117 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 GAGE12IP0CL82 117 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 ZNF415Q09FC8 603 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 GAGE4Q13068 117 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 GAGE5Q13069 117 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 DEFB113Q30KQ7 82 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 ZFAND6Q6FIF0 208 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 ASH1LQ9NR48 2969 aaKnown RBP4.94□□□□□ -1.62
HMG20A-201ENST00000336216 TRGV11A0A075B6L2 103 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 AVPP01185 164 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 PRM2P04554 102 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 WI2-2373I1.2A0A1W2PRP0 233 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 LINC01619G3V211 115 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 GAGE2BQ13066 116 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 GAGE2EQ4V326 116 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 ZNF493Q6ZR52 646 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 C3orf56Q8N813 242 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 SMIM2Q9BVW6 85 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 GAGE2DQ9UEU5 116 aa4.94□□□□□ -1.62
HMG20A-201ENST00000336216 TEX15Q9BXT5 2789 aa4.93□□□□□ -1.62
HMG20A-201ENST00000336216 IGHV1OR15-1A0A075B7D0 117 aa4.93□□□□□ -1.62
HMG20A-201ENST00000336216 PRSS47A8MTI9 375 aa4.93□□□□□ -1.62
HMG20A-201ENST00000336216 KRTAP10-9P60411 292 aa4.93□□□□□ -1.62
HMG20A-201ENST00000336216 PRORYQ9H606 182 aa4.93□□□□□ -1.62
HMG20A-201ENST00000336216 CIRBPQ14011 172 aaKnown RBP4.93□□□□□ -1.62
HMG20A-201ENST00000336216 ZNRF2Q8NHG8 242 aa4.93□□□□□ -1.62
HMG20A-201ENST00000336216 RAI1Q7Z5J4 1906 aaPredicted RBP4.93□□□□□ -1.62
HMG20A-201ENST00000336216 ODF3BA8MYP8 253 aa4.93□□□□□ -1.62
HMG20A-201ENST00000336216 E9PLD3 99 aa4.93□□□□□ -1.62
HMG20A-201ENST00000336216 INS-IGF2F8WCM5 200 aa4.93□□□□□ -1.62
HMG20A-201ENST00000336216 FOXI1Q12951 378 aa4.93□□□□□ -1.62
HMG20A-201ENST00000336216 TMEM190Q8WZ59 177 aa4.93□□□□□ -1.62
HMG20A-201ENST00000336216 TMEM101Q96IK0 257 aa4.93□□□□□ -1.62
HMG20A-201ENST00000336216 LY6LH3BQJ8 138 aa4.92□□□□□ -1.62
HMG20A-201ENST00000336216 COX6CP09669 75 aa4.92□□□□□ -1.62
HMG20A-201ENST00000336216 C11orf71Q6IPW1 123 aa4.92□□□□□ -1.62
HMG20A-201ENST00000336216 MDFICQ9P1T7 246 aa4.92□□□□□ -1.62
HMG20A-201ENST00000336216 CRYGBP07316 175 aa4.92□□□□□ -1.62
HMG20A-201ENST00000336216 RPL39P62891 51 aaKnown RBP4.92□□□□□ -1.62
HMG20A-201ENST00000336216 PLEKHB2Q96CS7 222 aa4.92□□□□□ -1.62
HMG20A-201ENST00000336216 RNF183Q96D59 192 aa4.92□□□□□ -1.62
HMG20A-201ENST00000336216 RNF185Q96GF1 192 aa4.92□□□□□ -1.62
HMG20A-201ENST00000336216 HIGD1BQ9P298 99 aa4.92□□□□□ -1.62
HMG20A-201ENST00000336216 ERG28Q9UKR5 140 aa4.92□□□□□ -1.62
HMG20A-201ENST00000336216 HHLA3Q9XRX5 114 aa4.92□□□□□ -1.62
HMG20A-201ENST00000336216 IGHG2P01859 326 aa4.92□□□□□ -1.62
HMG20A-201ENST00000336216 TMEM61Q8N0U2 210 aa4.92□□□□□ -1.62
HMG20A-201ENST00000336216 PPDPFLQ8WWR9 84 aa4.92□□□□□ -1.62
HMG20A-201ENST00000336216 DEFB4AO15263 64 aa4.91□□□□□ -1.62
HMG20A-201ENST00000336216 INSP01308 110 aa4.91□□□□□ -1.62
HMG20A-201ENST00000336216 EDN2P20800 178 aa4.91□□□□□ -1.62
HMG20A-201ENST00000336216 DEFB121Q5J5C9 76 aa4.91□□□□□ -1.62
HMG20A-201ENST00000336216 Q8N1Y9 231 aa4.91□□□□□ -1.62
HMG20A-201ENST00000336216 GCN1Q92616 2671 aaKnown RBP4.91□□□□□ -1.62
HMG20A-201ENST00000336216 ANK2Q01484 3957 aa4.91□□□□□ -1.62
HMG20A-201ENST00000336216 IGSF10Q6WRI0 2623 aa4.91□□□□□ -1.62
HMG20A-201ENST00000336216 VPS13CQ709C8 3753 aa4.91□□□□□ -1.62
HMG20A-201ENST00000336216 UBR5O95071 2799 aaPredicted RBP4.91□□□□□ -1.62
HMG20A-201ENST00000336216 CCL24O00175 119 aa4.91□□□□□ -1.62
HMG20A-201ENST00000336216 LGALS1P09382 135 aaKnown RBP4.91□□□□□ -1.62
HMG20A-201ENST00000336216 RPL36AP83881 106 aaKnown RBP4.91□□□□□ -1.62
HMG20A-201ENST00000336216 C16orf54Q6UWD8 224 aa4.91□□□□□ -1.62
HMG20A-201ENST00000336216 CLPSL2Q6UWE3 100 aa4.91□□□□□ -1.62
HMG20A-201ENST00000336216 NTN5Q8WTR8 489 aaPredicted RBP4.91□□□□□ -1.62
HMG20A-201ENST00000336216 RPL36ALQ969Q0 106 aaKnown RBP4.91□□□□□ -1.62
HMG20A-201ENST00000336216 C1QTNF4Q9BXJ3 329 aa4.91□□□□□ -1.62
HMG20A-201ENST00000336216 ELANEP08246 267 aa4.91□□□□□ -1.62
HMG20A-201ENST00000336216 SMAD5-AS1Q9Y6J3 95 aa4.91□□□□□ -1.62
HMG20A-201ENST00000336216 IGLC6P0CF74 106 aa4.9□□□□□ -1.62
HMG20A-201ENST00000336216 TRPT1Q86TN4 253 aaKnown RBP4.9□□□□□ -1.62
HMG20A-201ENST00000336216 OPRPNQ99935 248 aaPredicted RBP4.9□□□□□ -1.62
HMG20A-201ENST00000336216 TM2D2Q9BX73 214 aa4.9□□□□□ -1.62
HMG20A-201ENST00000336216 NOP10Q9NPE3 64 aaKnown RBP4.9□□□□□ -1.62
HMG20A-201ENST00000336216 C11orf21Q9P2W6 132 aa4.9□□□□□ -1.62
HMG20A-201ENST00000336216 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.9□□□□□ -1.62
HMG20A-201ENST00000336216 IGKV2-29A2NJV5 120 aaPredicted RBP4.9□□□□□ -1.62
HMG20A-201ENST00000336216 SLC25A20O43772 301 aa4.9□□□□□ -1.62
HMG20A-201ENST00000336216 TNFRSF13BO14836 293 aaPredicted RBP4.89□□□□□ -1.63
HMG20A-201ENST00000336216 P0DMU3 169 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 FAM231AP0DMU4 169 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 FAM231CP0DMU5 169 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 TAL2Q16559 108 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 C18orf65Q6ZTR6 163 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 ANKRD29Q8N6D5 301 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 C20orf173Q96LM9 149 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 CITED2Q99967 270 aaPredicted RBP4.89□□□□□ -1.63
HMG20A-201ENST00000336216 U3KQE9 123 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 TRAV8-4A0A0B4J246 113 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 C11orf86A6NJI1 115 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 LINC00158P58513 81 aa4.89□□□□□ -1.63
HMG20A-201ENST00000336216 CEMP1Q6PRD7 247 aaPredicted RBP4.89□□□□□ -1.63
HMG20A-201ENST00000336216 Q6ZUT4 128 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms