RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 UBE2D3P61077 147 aa3.64□□□□□ -1.83
LRIT3-201ENST00000327908 UBE2D2P62837 147 aa3.64□□□□□ -1.83
LRIT3-201ENST00000327908 TMEM88Q6PEY1 159 aa3.64□□□□□ -1.83
LRIT3-201ENST00000327908 TMEM101Q96IK0 257 aa3.64□□□□□ -1.83
LRIT3-201ENST00000327908 TMEM243Q9BU79 118 aa3.64□□□□□ -1.83
LRIT3-201ENST00000327908 M0QY20 66 aa3.64□□□□□ -1.83
LRIT3-201ENST00000327908 EVI2AP22794 236 aa3.64□□□□□ -1.83
LRIT3-201ENST00000327908 CAMPP49913 170 aa3.64□□□□□ -1.83
LRIT3-201ENST00000327908 SUMO2P61956 95 aaKnown RBP3.64□□□□□ -1.83
LRIT3-201ENST00000327908 Q0VG73 95 aa3.64□□□□□ -1.83
LRIT3-201ENST00000327908 FABP9Q0Z7S8 132 aa3.64□□□□□ -1.83
LRIT3-201ENST00000327908 FA2HQ7L5A8 372 aa3.64□□□□□ -1.83
LRIT3-201ENST00000327908 Q8N8P6 123 aa3.64□□□□□ -1.83
LRIT3-201ENST00000327908 CHCHD1Q96BP2 118 aaKnown RBP3.64□□□□□ -1.83
LRIT3-201ENST00000327908 TM2D2Q9BX73 214 aa3.64□□□□□ -1.83
LRIT3-201ENST00000327908 SETD2Q9BYW2 2564 aaPredicted RBP3.64□□□□□ -1.83
LRIT3-201ENST00000327908 NF1P21359 2839 aa3.64□□□□□ -1.83
LRIT3-201ENST00000327908 SSTP61278 116 aa3.63□□□□□ -1.83
LRIT3-201ENST00000327908 MRPL51Q4U2R6 128 aaKnown RBP3.63□□□□□ -1.83
LRIT3-201ENST00000327908 ZNF479Q96JC4 524 aa3.63□□□□□ -1.83
LRIT3-201ENST00000327908 MRPL18Q9H0U6 180 aaKnown RBP3.63□□□□□ -1.83
LRIT3-201ENST00000327908 SPANXA1Q9NS26 97 aa3.63□□□□□ -1.83
LRIT3-201ENST00000327908 TRBV27A0A0K0K1C4 114 aa3.63□□□□□ -1.83
LRIT3-201ENST00000327908 C1orf196B1AJZ1 125 aa3.63□□□□□ -1.83
LRIT3-201ENST00000327908 SEC11AP67812 179 aa3.63□□□□□ -1.83
LRIT3-201ENST00000327908 IQCJQ1A5X6 159 aa3.63□□□□□ -1.83
LRIT3-201ENST00000327908 SLC7A5P1Q8MH63 180 aa3.63□□□□□ -1.83
LRIT3-201ENST00000327908 SMIM2Q9BVW6 85 aa3.63□□□□□ -1.83
LRIT3-201ENST00000327908 IGLL5B9A064 214 aa3.63□□□□□ -1.83
LRIT3-201ENST00000327908 AMTP48728 403 aa3.63□□□□□ -1.83
LRIT3-201ENST00000327908 LAGE3Q14657 143 aa3.63□□□□□ -1.83
LRIT3-201ENST00000327908 SLC25A29Q8N8R3 303 aa3.63□□□□□ -1.83
LRIT3-201ENST00000327908 NEXN-AS1Q8NBZ9 246 aa3.63□□□□□ -1.83
LRIT3-201ENST00000327908 A0A087WWL8 130 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 NUDT3O95989 172 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 APLNQ9ULZ1 77 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 AGRNO00468 2067 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 ATP5LO75964 103 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 TNFRSF6BO95407 300 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 GCSHP23434 173 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 LINC00315P59091 139 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 ZNRF2Q8NHG8 242 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 PRSS3P2Q8NHM4 247 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 TMEM141Q96I45 108 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 CSDC2Q9Y534 153 aaKnown RBP3.62□□□□□ -1.83
LRIT3-201ENST00000327908 GAGE12JA6NER3 117 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 SDHAF1A6NFY7 115 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 F8WDY8 70 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 GAGE1Q13065 139 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 GAGE4Q13068 117 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 GAGE5Q13069 117 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 GAGE13Q4V321 117 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 AMMECR1LQ6DCA0 310 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 Q6ZN92 141 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 RNF185Q96GF1 192 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 CELSR1Q9NYQ6 3014 aa3.62□□□□□ -1.83
LRIT3-201ENST00000327908 A0A096LPF7 62 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 A0A1B0GUV1 79 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 DEFB4AO15263 64 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 RPS10P46783 165 aaKnown RBP3.61□□□□□ -1.83
LRIT3-201ENST00000327908 C14orf177Q52M58 125 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 LINC01556Q5JQF7 62 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 MRPL52Q86TS9 123 aaKnown RBP3.61□□□□□ -1.83
LRIT3-201ENST00000327908 CYSLTR1Q9Y271 337 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 TRBV6-8A0A0A6YYG3 113 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 TRAV8-3A0A0A6YYJ7 113 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 TRAV8-4A0A0B4J246 113 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 LINC01546A6NGU7 62 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 EREGO14944 169 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 POLR2KP53803 58 aaKnown RBP3.61□□□□□ -1.83
LRIT3-201ENST00000327908 TMEM70Q9BUB7 260 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 PYGO1Q9Y3Y4 419 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 FBN1P35555 2871 aaKnown RBP3.61□□□□□ -1.83
LRIT3-201ENST00000327908 STAB1Q9NY15 2570 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 A0A087WX48 190 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 D6R8Y8 96 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 HOXA5P20719 270 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 MRPS36P82909 103 aaKnown RBP3.61□□□□□ -1.83
LRIT3-201ENST00000327908 DGAT2L7PQ6IED9 249 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 VSIG2Q96IQ7 327 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 YPEL4Q96NS1 127 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 C2orf88Q9BSF0 95 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 NIPBLQ6KC79 2804 aaeCLIP3.61□□□□□ -1.83
LRIT3-201ENST00000327908 ANK2Q01484 3957 aa3.61□□□□□ -1.83
LRIT3-201ENST00000327908 SIVA1O15304 175 aa3.6□□□□□ -1.83
LRIT3-201ENST00000327908 DNAH10OSP0CZ25 163 aa3.6□□□□□ -1.83
LRIT3-201ENST00000327908 LINC01561Q8N1V8 128 aa3.6□□□□□ -1.83
LRIT3-201ENST00000327908 ALKBH7Q9BT30 221 aaPredicted RBP3.6□□□□□ -1.83
LRIT3-201ENST00000327908 CRPP02741 224 aa3.6□□□□□ -1.83
LRIT3-201ENST00000327908 IFI27P40305 119 aaPredicted RBP3.6□□□□□ -1.83
LRIT3-201ENST00000327908 CASC10Q5T4H9 136 aa3.6□□□□□ -1.83
LRIT3-201ENST00000327908 LYPD5Q6UWN5 251 aa3.6□□□□□ -1.83
LRIT3-201ENST00000327908 NRACQ8N912 160 aa3.6□□□□□ -1.83
LRIT3-201ENST00000327908 OR5A1Q8NGJ0 315 aa3.6□□□□□ -1.83
LRIT3-201ENST00000327908 AP5S1Q9NUS5 200 aa3.6□□□□□ -1.83
LRIT3-201ENST00000327908 HSPB8Q9UJY1 196 aa3.6□□□□□ -1.83
LRIT3-201ENST00000327908 CFAP161Q6P656 301 aa3.6□□□□□ -1.83
LRIT3-201ENST00000327908 ZNF575Q86XF7 245 aa3.6□□□□□ -1.83
LRIT3-201ENST00000327908 TIMM17AQ99595 171 aa3.6□□□□□ -1.83
LRIT3-201ENST00000327908 CHCHD5Q9BSY4 110 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms