RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 IGHG2P01859 326 aa12.63□□□□□ -0.39
SH3RF1-201ENST00000284637 HIST2H2BCQ6DN03 193 aa12.63□□□□□ -0.39
SH3RF1-201ENST00000284637 Q8N7P7 452 aa12.62□□□□□ -0.39
SH3RF1-201ENST00000284637 OPRPNQ99935 248 aaPredicted RBP12.62□□□□□ -0.39
SH3RF1-201ENST00000284637 IGKV2D-26A0A0A0MRZ7 120 aa12.62□□□□□ -0.39
SH3RF1-201ENST00000284637 CCL24O00175 119 aa12.62□□□□□ -0.39
SH3RF1-201ENST00000284637 NBL1P41271 181 aa12.62□□□□□ -0.39
SH3RF1-201ENST00000284637 C5orf56Q8N8D9 126 aa12.62□□□□□ -0.39
SH3RF1-201ENST00000284637 CRIP3Q6Q6R5 217 aa12.61□□□□□ -0.39
SH3RF1-201ENST00000284637 IGLC6P0CF74 106 aa12.61□□□□□ -0.39
SH3RF1-201ENST00000284637 ZNF80P51504 273 aaPredicted RBP12.61□□□□□ -0.39
SH3RF1-201ENST00000284637 CCDC179H3BU77 68 aa12.61□□□□□ -0.39
SH3RF1-201ENST00000284637 CFAP126Q5VTH2 177 aa12.61□□□□□ -0.39
SH3RF1-201ENST00000284637 FANCD2OSQ96PS1 177 aa12.61□□□□□ -0.39
SH3RF1-201ENST00000284637 IGHV4-30-2A0A087WSY4 118 aa12.6□□□□□ -0.39
SH3RF1-201ENST00000284637 BRK1Q8WUW1 75 aa12.6□□□□□ -0.39
SH3RF1-201ENST00000284637 K7EQD1 137 aa12.6□□□□□ -0.39
SH3RF1-201ENST00000284637 ZFP36P26651 326 aaKnown RBP12.6□□□□□ -0.39
SH3RF1-201ENST00000284637 COX7B2Q8TF08 81 aa12.6□□□□□ -0.39
SH3RF1-201ENST00000284637 IGKV2D-24A0A075B6R9 120 aa12.59□□□□□ -0.39
SH3RF1-201ENST00000284637 NDUFA7O95182 113 aa12.59□□□□□ -0.39
SH3RF1-201ENST00000284637 A0A1W2PNU3 283 aaPredicted RBP12.59□□□□□ -0.39
SH3RF1-201ENST00000284637 GYPEP15421 78 aa12.59□□□□□ -0.39
SH3RF1-201ENST00000284637 MED12LQ86YW9 2145 aa12.59□□□□□ -0.39
SH3RF1-201ENST00000284637 INSL3P51460 131 aa12.58□□□□□ -0.4
SH3RF1-201ENST00000284637 UNQ9165/PRO28630Q6UXU0 137 aa12.58□□□□□ -0.4
SH3RF1-201ENST00000284637 MDFICQ9P1T7 246 aa12.58□□□□□ -0.4
SH3RF1-201ENST00000284637 ESM1Q9NQ30 184 aa12.58□□□□□ -0.4
SH3RF1-201ENST00000284637 NUP210Q8TEM1 1887 aaPredicted RBP12.58□□□□□ -0.4
SH3RF1-201ENST00000284637 IGHV4OR15-8A0A075B7B6 117 aa12.57□□□□□ -0.4
SH3RF1-201ENST00000284637 A0A087WW49 117 aa12.57□□□□□ -0.4
SH3RF1-201ENST00000284637 MAPKAPK5-AS1Q8N8E1 139 aa12.57□□□□□ -0.4
SH3RF1-201ENST00000284637 Q9HAA7 133 aa12.57□□□□□ -0.4
SH3RF1-201ENST00000284637 LECT2O14960 151 aa12.57□□□□□ -0.4
SH3RF1-201ENST00000284637 DAZ2Q13117 558 aaKnown RBP12.57□□□□□ -0.4
SH3RF1-201ENST00000284637 DAZ4Q86SG3 579 aaKnown RBP12.57□□□□□ -0.4
SH3RF1-201ENST00000284637 DAZ3Q9NR90 486 aaKnown RBP12.57□□□□□ -0.4
SH3RF1-201ENST00000284637 TRBV12-3P01733 135 aa12.56□□□□□ -0.4
SH3RF1-201ENST00000284637 VSIG2Q96IQ7 327 aa12.56□□□□□ -0.4
SH3RF1-201ENST00000284637 CEMP1Q6PRD7 247 aaPredicted RBP12.56□□□□□ -0.4
SH3RF1-201ENST00000284637 C1orf229Q6ZS94 237 aaPredicted RBP12.56□□□□□ -0.4
SH3RF1-201ENST00000284637 IMUPQ9GZP8 106 aa12.56□□□□□ -0.4
SH3RF1-201ENST00000284637 IGHV4-28A0A0C4DH34 117 aa12.56□□□□□ -0.4
SH3RF1-201ENST00000284637 PCNX3Q9H6A9 2034 aa12.55□□□□□ -0.4
SH3RF1-201ENST00000284637 TRBV7-3A0A075B6L6 115 aa12.55□□□□□ -0.4
SH3RF1-201ENST00000284637 C20orf203Q8NBC4 194 aa12.55□□□□□ -0.4
SH3RF1-201ENST00000284637 IGHV3-30-3P0DP02 117 aa12.54□□□□□ -0.4
SH3RF1-201ENST00000284637 RNF152Q8N8N0 203 aa12.54□□□□□ -0.4
SH3RF1-201ENST00000284637 JMJD7-PLA2G4BH0Y9G9 81 aa12.54□□□□□ -0.4
SH3RF1-201ENST00000284637 CGB3P0DN86 165 aa12.54□□□□□ -0.4
SH3RF1-201ENST00000284637 CGB7P0DN87 165 aa12.54□□□□□ -0.4
SH3RF1-201ENST00000284637 KIF26AQ9ULI4 1882 aaPredicted RBP12.54□□□□□ -0.4
SH3RF1-201ENST00000284637 COX7A2LO14548 114 aa12.54□□□□□ -0.4
SH3RF1-201ENST00000284637 MED14OSP0DP75 135 aa12.54□□□□□ -0.4
SH3RF1-201ENST00000284637 M0QXV9 152 aa12.53□□□□□ -0.4
SH3RF1-201ENST00000284637 SPRY4Q9C004 299 aa12.53□□□□□ -0.4
SH3RF1-201ENST00000284637 P0DMU3 169 aa12.53□□□□□ -0.4
SH3RF1-201ENST00000284637 FAM231AP0DMU4 169 aa12.53□□□□□ -0.4
SH3RF1-201ENST00000284637 FAM231CP0DMU5 169 aa12.53□□□□□ -0.4
SH3RF1-201ENST00000284637 IGHV1-58A0A0C4DH39 117 aa12.53□□□□□ -0.4
SH3RF1-201ENST00000284637 C16orf74Q96GX8 76 aa12.53□□□□□ -0.4
SH3RF1-201ENST00000284637 CAMK2N2Q96S95 79 aa12.53□□□□□ -0.4
SH3RF1-201ENST00000284637 LRRC75A-AS1Q8N1F1 130 aa12.53□□□□□ -0.4
SH3RF1-201ENST00000284637 PRB2P02812 416 aaPredicted RBP12.53□□□□□ -0.4
SH3RF1-201ENST00000284637 Q6Q795 121 aa12.53□□□□□ -0.4
SH3RF1-201ENST00000284637 MIR7-3HGQ8N6C7 128 aa12.52□□□□□ -0.41
SH3RF1-201ENST00000284637 NRGNQ92686 78 aa12.52□□□□□ -0.41
SH3RF1-201ENST00000284637 K7EMT4 169 aa12.52□□□□□ -0.41
SH3RF1-201ENST00000284637 UBE2BP63146 152 aa12.51□□□□□ -0.41
SH3RF1-201ENST00000284637 TMEM61Q8N0U2 210 aa12.51□□□□□ -0.41
SH3RF1-201ENST00000284637 RMI2Q96E14 147 aa12.51□□□□□ -0.41
SH3RF1-201ENST00000284637 FAM236DA0A1B0GTK5 79 aa12.51□□□□□ -0.41
SH3RF1-201ENST00000284637 FAM236CP0DP71 79 aa12.51□□□□□ -0.41
SH3RF1-201ENST00000284637 ADORA2A-AS1P86434 159 aa12.51□□□□□ -0.41
SH3RF1-201ENST00000284637 C20orf197Q8N268 126 aa12.51□□□□□ -0.41
SH3RF1-201ENST00000284637 PKIGQ9Y2B9 76 aa12.51□□□□□ -0.41
SH3RF1-201ENST00000284637 V9GYY9 64 aa12.51□□□□□ -0.41
SH3RF1-201ENST00000284637 IGHV3-30P01768 117 aa12.5□□□□□ -0.41
SH3RF1-201ENST00000284637 IGHV3-33P01772 117 aa12.5□□□□□ -0.41
SH3RF1-201ENST00000284637 IGHV3-30-5P0DP03 117 aa12.5□□□□□ -0.41
SH3RF1-201ENST00000284637 NEXN-AS1Q8NBZ9 246 aa12.5□□□□□ -0.41
SH3RF1-201ENST00000284637 FAM110AQ9BQ89 295 aa12.5□□□□□ -0.41
SH3RF1-201ENST00000284637 FUSP35637 526 aaKnown RBP eCLIP12.5□□□□□ -0.41
SH3RF1-201ENST00000284637 GPHB5Q86YW7 130 aa12.5□□□□□ -0.41
SH3RF1-201ENST00000284637 U3KQK5 164 aa12.5□□□□□ -0.41
SH3RF1-201ENST00000284637 NCR3O14931 201 aa12.5□□□□□ -0.41
SH3RF1-201ENST00000284637 MRPS12O15235 138 aaKnown RBP12.5□□□□□ -0.41
SH3RF1-201ENST00000284637 C10orf105Q8TEF2 133 aa12.5□□□□□ -0.41
SH3RF1-201ENST00000284637 PCDH15Q96QU1 1955 aa12.49□□□□□ -0.41
SH3RF1-201ENST00000284637 LINC01548A6NM66 108 aa12.49□□□□□ -0.41
SH3RF1-201ENST00000284637 MIAQ16674 131 aa12.49□□□□□ -0.41
SH3RF1-201ENST00000284637 RPL18AQ02543 176 aaKnown RBP12.49□□□□□ -0.41
SH3RF1-201ENST00000284637 ETDCA0A1B0GVM5 59 aa12.49□□□□□ -0.41
SH3RF1-201ENST00000284637 NFE4Q86UQ8 179 aa12.49□□□□□ -0.41
SH3RF1-201ENST00000284637 CCDC140Q96MF4 163 aa12.49□□□□□ -0.41
SH3RF1-201ENST00000284637 A0A0J9YX75 114 aa12.49□□□□□ -0.41
SH3RF1-201ENST00000284637 TRBV30A0A0K0K1B3 111 aa12.49□□□□□ -0.41
SH3RF1-201ENST00000284637 SIRPDQ9H106 197 aa12.48□□□□□ -0.41
SH3RF1-201ENST00000284637 NDUFS5O43920 106 aa12.48□□□□□ -0.41
SH3RF1-201ENST00000284637 A0A0J9YXY3 114 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms