RNA–Protein interactions for RNA: ENST00000253008.2

PRDM12-201, Transcript of PR/SET domain 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM12, Length 2,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM12-201ENST00000253008 Q9UF83 564 aa13.48□□□□□ -0.25
PRDM12-201ENST00000253008 LINC01549A6NIU2 74 aa13.48□□□□□ -0.25
PRDM12-201ENST00000253008 RPL32P62910 135 aaKnown RBP13.48□□□□□ -0.25
PRDM12-201ENST00000253008 IGHV3-64A0A075B6Q5 118 aa13.47□□□□□ -0.25
PRDM12-201ENST00000253008 LINC01619G3V211 115 aa13.47□□□□□ -0.25
PRDM12-201ENST00000253008 APOMO95445 188 aa13.47□□□□□ -0.25
PRDM12-201ENST00000253008 BBC3Q96PG8 261 aaPredicted RBP13.47□□□□□ -0.25
PRDM12-201ENST00000253008 SPANXB1Q9NS25 103 aaPredicted RBP13.47□□□□□ -0.25
PRDM12-201ENST00000253008 A0A0J9YY99 117 aa13.46□□□□□ -0.25
PRDM12-201ENST00000253008 SLURP1P55000 103 aa13.46□□□□□ -0.25
PRDM12-201ENST00000253008 NBPF19A0A087WUL8 3843 aa13.46□□□□□ -0.26
PRDM12-201ENST00000253008 INSL3P51460 131 aa13.46□□□□□ -0.26
PRDM12-201ENST00000253008 ZNF702PQ9H963 129 aa13.46□□□□□ -0.26
PRDM12-201ENST00000253008 MRPL16Q9NX20 251 aaKnown RBP13.46□□□□□ -0.26
PRDM12-201ENST00000253008 TRBV6-5A0A0K0K1A5 114 aa13.45□□□□□ -0.26
PRDM12-201ENST00000253008 TIMM17AQ99595 171 aa13.45□□□□□ -0.26
PRDM12-201ENST00000253008 PRO0461Q9UI25 63 aa13.45□□□□□ -0.26
PRDM12-201ENST00000253008 NAV2Q8IVL1 2488 aa13.44□□□□□ -0.26
PRDM12-201ENST00000253008 GATA3P23771 443 aa13.44□□□□□ -0.26
PRDM12-201ENST00000253008 TCTEX1D4Q5JR98 221 aa13.44□□□□□ -0.26
PRDM12-201ENST00000253008 TMEM141Q96I45 108 aa13.44□□□□□ -0.26
PRDM12-201ENST00000253008 UBR5O95071 2799 aaPredicted RBP13.44□□□□□ -0.26
PRDM12-201ENST00000253008 SYT8Q8NBV8 401 aa13.44□□□□□ -0.26
PRDM12-201ENST00000253008 ODF3Q96PU9 254 aa13.44□□□□□ -0.26
PRDM12-201ENST00000253008 AMELXQ99217 191 aa13.44□□□□□ -0.26
PRDM12-201ENST00000253008 F8W1H4 67 aa13.43□□□□□ -0.26
PRDM12-201ENST00000253008 TSPAN13O95857 204 aa13.43□□□□□ -0.26
PRDM12-201ENST00000253008 UBE2D1P51668 147 aa13.43□□□□□ -0.26
PRDM12-201ENST00000253008 KRTAP10-9P60411 292 aa13.43□□□□□ -0.26
PRDM12-201ENST00000253008 VPREB3Q9UKI3 123 aa13.43□□□□□ -0.26
PRDM12-201ENST00000253008 NF1P21359 2839 aa13.43□□□□□ -0.26
PRDM12-201ENST00000253008 GAGE13Q4V321 117 aa13.42□□□□□ -0.26
PRDM12-201ENST00000253008 CEMP1Q6PRD7 247 aaPredicted RBP13.42□□□□□ -0.26
PRDM12-201ENST00000253008 DEFB131AP59861 70 aa13.42□□□□□ -0.26
PRDM12-201ENST00000253008 SAMD13Q5VXD3 122 aa13.42□□□□□ -0.26
PRDM12-201ENST00000253008 LOC107984156A0A0G2JMH3 177 aa13.41□□□□□ -0.26
PRDM12-201ENST00000253008 RBMY1BA6NDE4 496 aaKnown RBP13.41□□□□□ -0.26
PRDM12-201ENST00000253008 RBMY1EA6NEQ0 496 aaKnown RBP13.41□□□□□ -0.26
PRDM12-201ENST00000253008 RBMY1DP0C7P1 496 aaKnown RBP13.41□□□□□ -0.26
PRDM12-201ENST00000253008 HERVK_113P61574 105 aa13.41□□□□□ -0.26
PRDM12-201ENST00000253008 RNASE13Q5GAN3 156 aaKnown RBP13.41□□□□□ -0.26
PRDM12-201ENST00000253008 ARL17AQ8IVW1 177 aa13.41□□□□□ -0.26
PRDM12-201ENST00000253008 NIPBLQ6KC79 2804 aaeCLIP13.41□□□□□ -0.26
PRDM12-201ENST00000253008 SONP18583 2426 aaKnown RBP13.41□□□□□ -0.26
PRDM12-201ENST00000253008 SPAG8Q99932 426 aaPredicted RBP13.41□□□□□ -0.26
PRDM12-201ENST00000253008 CHD6Q8TD26 2715 aa13.41□□□□□ -0.26
PRDM12-201ENST00000253008 TRPT1Q86TN4 253 aaKnown RBP13.4□□□□□ -0.26
PRDM12-201ENST00000253008 A0A0J9YXV3 536 aa13.4□□□□□ -0.26
PRDM12-201ENST00000253008 J3QQQ9 107 aa13.4□□□□□ -0.26
PRDM12-201ENST00000253008 C20orf203Q8NBC4 194 aa13.4□□□□□ -0.26
PRDM12-201ENST00000253008 TSSC4Q9Y5U2 329 aaPredicted RBP13.4□□□□□ -0.26
PRDM12-201ENST00000253008 IGHV3-30P01768 117 aa13.39□□□□□ -0.27
PRDM12-201ENST00000253008 IGHV3-30-5P0DP03 117 aa13.39□□□□□ -0.27
PRDM12-201ENST00000253008 SMCPP49901 116 aaPredicted RBP13.39□□□□□ -0.27
PRDM12-201ENST00000253008 DSCR9P59020 149 aa13.39□□□□□ -0.27
PRDM12-201ENST00000253008 Q6ZSN1 163 aa13.39□□□□□ -0.27
PRDM12-201ENST00000253008 KMT2BQ9UMN6 2715 aaPredicted RBP13.39□□□□□ -0.27
PRDM12-201ENST00000253008 NSUN5P1Q3KNT7 163 aa13.39□□□□□ -0.27
PRDM12-201ENST00000253008 PAPPA-AS1Q5QFB9 102 aa13.39□□□□□ -0.27
PRDM12-201ENST00000253008 Q6YL49 198 aa13.39□□□□□ -0.27
PRDM12-201ENST00000253008 CFC1BP0CG36 223 aa13.38□□□□□ -0.27
PRDM12-201ENST00000253008 CFC1P0CG37 223 aa13.38□□□□□ -0.27
PRDM12-201ENST00000253008 PSMB2P49721 201 aa13.38□□□□□ -0.27
PRDM12-201ENST00000253008 NDUFA11Q86Y39 141 aa13.38□□□□□ -0.27
PRDM12-201ENST00000253008 FAM104AQ969W3 186 aa13.38□□□□□ -0.27
PRDM12-201ENST00000253008 UBE2E2Q96LR5 201 aa13.38□□□□□ -0.27
PRDM12-201ENST00000253008 GTSF1LQ9H1H1 148 aa13.38□□□□□ -0.27
PRDM12-201ENST00000253008 IGLV4-3A0A075B6K6 122 aa13.38□□□□□ -0.27
PRDM12-201ENST00000253008 TMEM89A2RUT3 159 aa13.37□□□□□ -0.27
PRDM12-201ENST00000253008 I3L3M4 83 aa13.37□□□□□ -0.27
PRDM12-201ENST00000253008 ELANEP08246 267 aa13.37□□□□□ -0.27
PRDM12-201ENST00000253008 SLC25A29Q8N8R3 303 aa13.37□□□□□ -0.27
PRDM12-201ENST00000253008 TMEM238LA0A1B0GVL6 79 aa13.37□□□□□ -0.27
PRDM12-201ENST00000253008 A6NJY4 79 aa13.37□□□□□ -0.27
PRDM12-201ENST00000253008 ADARB2-AS1A8MUL3 147 aa13.37□□□□□ -0.27
PRDM12-201ENST00000253008 EIF4EBP3O60516 100 aaPredicted RBP13.37□□□□□ -0.27
PRDM12-201ENST00000253008 IGHV4-31P0DP07 118 aa13.37□□□□□ -0.27
PRDM12-201ENST00000253008 ZNF22P17026 224 aaPredicted RBP13.37□□□□□ -0.27
PRDM12-201ENST00000253008 PTH2Q96A98 100 aa13.37□□□□□ -0.27
PRDM12-201ENST00000253008 CLUHP3Q96NS8 147 aa13.37□□□□□ -0.27
PRDM12-201ENST00000253008 TMEM223A0PJW6 202 aa13.36□□□□□ -0.27
PRDM12-201ENST00000253008 NFE4Q86UQ8 179 aa13.36□□□□□ -0.27
PRDM12-201ENST00000253008 LGALS3P17931 250 aaKnown RBP13.36□□□□□ -0.27
PRDM12-201ENST00000253008 AZU1P20160 251 aa13.36□□□□□ -0.27
PRDM12-201ENST00000253008 RHOHQ15669 191 aa13.36□□□□□ -0.27
PRDM12-201ENST00000253008 TMEM61Q8N0U2 210 aa13.36□□□□□ -0.27
PRDM12-201ENST00000253008 PRRC2AP48634 2157 aaKnown RBP13.35□□□□□ -0.27
PRDM12-201ENST00000253008 ZNF418Q8TF45 676 aaPredicted RBP13.35□□□□□ -0.27
PRDM12-201ENST00000253008 CR1P17927 2039 aa13.35□□□□□ -0.27
PRDM12-201ENST00000253008 WNK1Q9H4A3 2382 aa13.35□□□□□ -0.27
PRDM12-201ENST00000253008 H3BMM0 161 aa13.35□□□□□ -0.27
PRDM12-201ENST00000253008 FSHBP01225 129 aa13.35□□□□□ -0.27
PRDM12-201ENST00000253008 SCGB1A1P11684 91 aa13.35□□□□□ -0.27
PRDM12-201ENST00000253008 SMAGPQ0VAQ4 97 aa13.35□□□□□ -0.27
PRDM12-201ENST00000253008 KHDC1LQ5JSQ8 128 aa13.35□□□□□ -0.27
PRDM12-201ENST00000253008 ZNF843Q8N446 348 aa13.35□□□□□ -0.27
PRDM12-201ENST00000253008 SETD2Q9BYW2 2564 aaPredicted RBP13.35□□□□□ -0.27
PRDM12-201ENST00000253008 NACAE9PAV3 2078 aa13.35□□□□□ -0.27
PRDM12-201ENST00000253008 TRGV11A0A075B6L2 103 aa13.34□□□□□ -0.27
PRDM12-201ENST00000253008 J3QLI3 93 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms