RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 CFAP161Q6P656 301 aa16.68■□□□□ 0.26
POLR2J3-220ENST00000613744 LY6LH3BQJ8 138 aa16.68■□□□□ 0.26
POLR2J3-220ENST00000613744 ZFP2Q6ZN57 461 aa16.68■□□□□ 0.26
POLR2J3-220ENST00000613744 NDUFA11Q86Y39 141 aa16.68■□□□□ 0.26
POLR2J3-220ENST00000613744 DYNAPQ8N1N2 210 aa16.68■□□□□ 0.26
POLR2J3-220ENST00000613744 IGHV1-69DA0A0B4J2H0 117 aa16.67■□□□□ 0.26
POLR2J3-220ENST00000613744 F8W735 103 aaPredicted RBP16.67■□□□□ 0.26
POLR2J3-220ENST00000613744 IGHV1-69P01742 117 aa16.67■□□□□ 0.26
POLR2J3-220ENST00000613744 SAA4P35542 130 aa16.67■□□□□ 0.26
POLR2J3-220ENST00000613744 SCGB1D4Q6XE38 83 aa16.67■□□□□ 0.26
POLR2J3-220ENST00000613744 FANCD2OSQ96PS1 177 aa16.67■□□□□ 0.26
POLR2J3-220ENST00000613744 C21orf62Q9NYP8 219 aa16.67■□□□□ 0.26
POLR2J3-220ENST00000613744 F8P00451 2351 aa16.67■□□□□ 0.26
POLR2J3-220ENST00000613744 IGHV7-4-1A0A0J9YVY3 117 aa16.66■□□□□ 0.26
POLR2J3-220ENST00000613744 NPFFO15130 113 aa16.66■□□□□ 0.26
POLR2J3-220ENST00000613744 NBR2O15453 112 aa16.66■□□□□ 0.26
POLR2J3-220ENST00000613744 PAPPA-AS1Q5QFB9 102 aa16.66■□□□□ 0.26
POLR2J3-220ENST00000613744 NPBQ8NG41 125 aa16.66■□□□□ 0.26
POLR2J3-220ENST00000613744 RHODO00212 210 aa16.66■□□□□ 0.26
POLR2J3-220ENST00000613744 TCL1BO95988 128 aa16.66■□□□□ 0.26
POLR2J3-220ENST00000613744 SS18L2Q9UHA2 77 aa16.66■□□□□ 0.26
POLR2J3-220ENST00000613744 Q6Q795 121 aa16.65■□□□□ 0.26
POLR2J3-220ENST00000613744 PTH2Q96A98 100 aa16.65■□□□□ 0.26
POLR2J3-220ENST00000613744 TIMM23O14925 209 aa16.65■□□□□ 0.26
POLR2J3-220ENST00000613744 MXRA5Q9NR99 2828 aa16.64■□□□□ 0.25
POLR2J3-220ENST00000613744 MRPL53Q96EL3 112 aaKnown RBP16.64■□□□□ 0.25
POLR2J3-220ENST00000613744 HLA-DMBP28068 263 aa16.63■□□□□ 0.25
POLR2J3-220ENST00000613744 HERVK_113P61574 105 aa16.63■□□□□ 0.25
POLR2J3-220ENST00000613744 ANKRD29Q8N6D5 301 aa16.63■□□□□ 0.25
POLR2J3-220ENST00000613744 BAALCQ8WXS3 180 aa16.63■□□□□ 0.25
POLR2J3-220ENST00000613744 UFC1Q9Y3C8 167 aa16.63■□□□□ 0.25
POLR2J3-220ENST00000613744 MINOS1Q5TGZ0 78 aa16.63■□□□□ 0.25
POLR2J3-220ENST00000613744 C10orf126Q8N4M7 172 aa16.63■□□□□ 0.25
POLR2J3-220ENST00000613744 AJUBAQ96IF1 538 aa16.63■□□□□ 0.25
POLR2J3-220ENST00000613744 MINOS1-NBL1R4GNA1 71 aa16.63■□□□□ 0.25
POLR2J3-220ENST00000613744 CUBNO60494 3623 aa16.63■□□□□ 0.25
POLR2J3-220ENST00000613744 ANK3Q12955 4377 aaKnown RBP16.62■□□□□ 0.25
POLR2J3-220ENST00000613744 PLEKHB2Q96CS7 222 aa16.62■□□□□ 0.25
POLR2J3-220ENST00000613744 LINC01600Q96MT4 127 aa16.62■□□□□ 0.25
POLR2J3-220ENST00000613744 HIVEP2P31629 2446 aa16.62■□□□□ 0.25
POLR2J3-220ENST00000613744 TRAV26-2A0A0B4J265 109 aa16.61■□□□□ 0.25
POLR2J3-220ENST00000613744 INAFM1C9JVW0 142 aa16.61■□□□□ 0.25
POLR2J3-220ENST00000613744 FSHBP01225 129 aa16.61■□□□□ 0.25
POLR2J3-220ENST00000613744 SUMO2P61956 95 aaKnown RBP16.61■□□□□ 0.25
POLR2J3-220ENST00000613744 SPANXN1Q5VSR9 72 aa16.61■□□□□ 0.25
POLR2J3-220ENST00000613744 C11orf21Q9P2W6 132 aa16.61■□□□□ 0.25
POLR2J3-220ENST00000613744 M0R381 172 aa16.61■□□□□ 0.25
POLR2J3-220ENST00000613744 SCGB1C2P0DMR2 95 aa16.61■□□□□ 0.25
POLR2J3-220ENST00000613744 RASL10AQ92737 203 aa16.61■□□□□ 0.25
POLR2J3-220ENST00000613744 A0A0J9YY99 117 aa16.6■□□□□ 0.25
POLR2J3-220ENST00000613744 NHLRC4P0CG21 123 aaPredicted RBP16.6■□□□□ 0.25
POLR2J3-220ENST00000613744 GAGE2BQ13066 116 aa16.6■□□□□ 0.25
POLR2J3-220ENST00000613744 GAGE2EQ4V326 116 aa16.6■□□□□ 0.25
POLR2J3-220ENST00000613744 FAM110AQ9BQ89 295 aa16.6■□□□□ 0.25
POLR2J3-220ENST00000613744 GAGE2DQ9UEU5 116 aa16.6■□□□□ 0.25
POLR2J3-220ENST00000613744 HES1Q14469 280 aa16.59■□□□□ 0.25
POLR2J3-220ENST00000613744 IGFL4Q6B9Z1 124 aa16.59■□□□□ 0.25
POLR2J3-220ENST00000613744 S4R3C0 116 aa16.59■□□□□ 0.25
POLR2J3-220ENST00000613744 PRAC2D3DTV9 90 aa16.58■□□□□ 0.25
POLR2J3-220ENST00000613744 PPP1R17O96001 155 aa16.58■□□□□ 0.25
POLR2J3-220ENST00000613744 CTSGP08311 255 aa16.58■□□□□ 0.25
POLR2J3-220ENST00000613744 C2orf66Q6UXQ4 117 aa16.58■□□□□ 0.25
POLR2J3-220ENST00000613744 B5MCH6 92 aa16.58■□□□□ 0.24
POLR2J3-220ENST00000613744 AGPAT4-IT1Q9H0P7 198 aa16.58■□□□□ 0.24
POLR2J3-220ENST00000613744 PRO1854Q9UHT4 67 aa16.58■□□□□ 0.24
POLR2J3-220ENST00000613744 MTORP42345 2549 aa16.58■□□□□ 0.24
POLR2J3-220ENST00000613744 GAGE12JA6NER3 117 aa16.57■□□□□ 0.24
POLR2J3-220ENST00000613744 SNCGO76070 127 aa16.57■□□□□ 0.24
POLR2J3-220ENST00000613744 GAGE7O76087 117 aa16.57■□□□□ 0.24
POLR2J3-220ENST00000613744 IGHV3-30P01768 117 aa16.57■□□□□ 0.24
POLR2J3-220ENST00000613744 CFC1BP0CG36 223 aa16.57■□□□□ 0.24
POLR2J3-220ENST00000613744 CFC1P0CG37 223 aa16.57■□□□□ 0.24
POLR2J3-220ENST00000613744 GAGE12FP0CL80 117 aa16.57■□□□□ 0.24
POLR2J3-220ENST00000613744 GAGE12GP0CL81 117 aa16.57■□□□□ 0.24
POLR2J3-220ENST00000613744 GAGE12IP0CL82 117 aa16.57■□□□□ 0.24
POLR2J3-220ENST00000613744 IGHV3-30-5P0DP03 117 aa16.57■□□□□ 0.24
POLR2J3-220ENST00000613744 NDUFV3P56181 108 aaKnown RBP16.57■□□□□ 0.24
POLR2J3-220ENST00000613744 GAGE4Q13068 117 aa16.57■□□□□ 0.24
POLR2J3-220ENST00000613744 DEFB112Q30KQ8 113 aa16.57■□□□□ 0.24
POLR2J3-220ENST00000613744 SLC25A20O43772 301 aa16.57■□□□□ 0.24
POLR2J3-220ENST00000613744 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.57■□□□□ 0.24
POLR2J3-220ENST00000613744 SLC25A29Q8N8R3 303 aa16.57■□□□□ 0.24
POLR2J3-220ENST00000613744 OOSP1A8MZH6 123 aa16.56■□□□□ 0.24
POLR2J3-220ENST00000613744 H3BVH4 76 aa16.55■□□□□ 0.24
POLR2J3-220ENST00000613744 C9orf47Q6ZRZ4 202 aa16.55■□□□□ 0.24
POLR2J3-220ENST00000613744 RAX2Q96IS3 184 aa16.55■□□□□ 0.24
POLR2J3-220ENST00000613744 LENEPQ9Y5L5 61 aa16.55■□□□□ 0.24
POLR2J3-220ENST00000613744 TEP1Q99973 2627 aaKnown RBP16.54■□□□□ 0.24
POLR2J3-220ENST00000613744 P0DMU3 169 aa16.54■□□□□ 0.24
POLR2J3-220ENST00000613744 FAM231AP0DMU4 169 aa16.54■□□□□ 0.24
POLR2J3-220ENST00000613744 FAM231CP0DMU5 169 aa16.54■□□□□ 0.24
POLR2J3-220ENST00000613744 KIR2DL4Q99706 377 aa16.54■□□□□ 0.24
POLR2J3-220ENST00000613744 DPH3P1Q9H4G8 78 aa16.54■□□□□ 0.24
POLR2J3-220ENST00000613744 LINC01548A6NM66 108 aa16.54■□□□□ 0.24
POLR2J3-220ENST00000613744 SFTA2Q6UW10 78 aa16.54■□□□□ 0.24
POLR2J3-220ENST00000613744 KLK15Q9H2R5 256 aa16.54■□□□□ 0.24
POLR2J3-220ENST00000613744 BUB3O43684 328 aa16.53■□□□□ 0.24
POLR2J3-220ENST00000613744 IFITM1P13164 125 aa16.53■□□□□ 0.24
POLR2J3-220ENST00000613744 RPL32P62910 135 aaKnown RBP16.53■□□□□ 0.24
POLR2J3-220ENST00000613744 TRBV7-9A0A0J9YWB2 115 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms